TNFRSF17 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of GeneSNPs

AGGCAAATTC AAGTGATCCA TTTATGTAAA CAGAAAAATG CACTATATAA 50
ATGTATCTAT CTAGAATTCA GGGATCGGTG AAACAAAAGA CATCGCATCG 100
GCAGGTCTGT TTGCAACTTC TGGGATACAC CAGGTGTTAG CGGTGATGAC 150
TTCTGGATGC TTGGACTGTG GATTTTTAAA ATGGTTTTTT TATCTGCTCA 200 | var(189):[:0.83]
TCTGTATTTC TAAATTTTCA ACAATGGAAC ATAGATTATT GTATTATTAT 250 | var(203):[C:0.01]
TATAATACCC CAAACCTATC TTCCTCTCAG CCCTCTTTCC ACGAGCTCTT 300 | var(253):[C:0.01]
ACCCTAAATG TCTCTTTTTC TGTCAGTGGC ATTGTGCGTC TTCCTTAGTG 350 | var(337):[A:0.17]
CATCACCTCT GATCTTCCTG TAGAATTTTT TTTTTTTTTG AGATAGAGTC 400 | var(351):[T:0.01] | var(361):[A:0.01] | REPEAT | var(392):[C:0.01]
TTGCTTTGTC ACCCAGGCTG GAGCGCAGTG GCCTGATCTT GGCTTACTGC 450
AAACTCCGCC TCCTGGGTTC AAGCACGTCT CCCTGCCTCA GCCTCCTGAG 500
TAGCTGGGAT CATAGGTGCC TGCCACCATG CCTGACTAAT TTTTGTATTT 550
TTAGTAGAGA CGGGGTTTCA CCATGTTGGC CAGGCTGTTC TGGAACTCCT 600
GACCTCAAGT GATCCACCTG CCTCGGCCTC CCAAAGTGCT GGGATTACAG 650
GAGAGCGCCA CGGCGCCCAG CTTACACCAG ACTACTTTTT AAAATGTTTT 700 | REPEAT
TGTAAAGTCA GGGTTTCGCC ATGTTGCCCA GGCTGATTTT GAACTCCTGG 750 | var(718):[A:0.21]
GCTCAAGCAA TCCTTTTGCC TTTTGACTCC CAAAGTCCTG GGATTACAGG 800
TGTGAACCCC TGCAGCTGGC CTCAATGTTA AGATCTTAAG GGGCACAGCA 850
CAGACCTTGT CTTGTCTATC TCCCTGGCAC CTCTCACAGA GTACAGCTTA 900
TTAACAGATG TTCCAGAAAC TGTTACTGAA CATTCGGCTT GATGCTGTGG 950 | var(933):[A:0.31] | var(946):[C:0.18]
GCTTGTCTGC ATCTTGCAAC TGTCACCTGG CTGAGAAATT TCTTCTATAA 1000
ATAAGCAGTT TCTGTTTCAG ATGTGATATG CCCTGATATT TACACCCTGT 1050 | var(1033):[G:0.01]
CTCTTACCCC ATCCAAGACT CAAACTTAGA AACTTGAATT AGATGTGGTA 1100 | Exon 1 | UTR
TTCAAATCCT TAGCTGCCGC GAAGACACAG ACAGCCCCCG TAAGAACCCA 1150 | var(1133):[G:0.17] | var(1139):[T:0.15]
CGAAGCAGGC GAAGTTCATT GTTCTCAACA TTCTAGCTGC TCTTGCTGCA 1200
TTTGCTCTGG AATTCTTGTA GAGATATTAC TTGTCCTTCC AGGCTGTTCT 1250
TTCTGTAGCT CCCTTGTTTT CTTTTTGTGA TCA
TGTTGCA GATGGCTGGG 1300
                                    M  L  Q   M  A  G  6
CAGTGCTCCC AAAATGAATA TTTTGACAGT TTGTTGCATG CTTGCATACC 1350
 Q  C  S   Q  N  E  Y   F  D  S   L  L  H   A  C  I  P 23
TTGTCAACTT CGATGTTCTT CTAATACTCC TCCTCTAACA TGTCAGCGTT 1400
  C  Q  L   R  C  S   S  N  T  P   P  L  T   C  Q  R   39
ATTGTAATGC AAGTAAGTAA TATTGCTTGA ACGATTATTC ATTGGTGTGA 1450 | var(1433):[A:0.01]
Y  C  N  A                                             43
ACTATTCTGT CTATATGGAC TGCTTATTCA GAGAATCAAC ATAATGGGCA 1500 | var(1466):[C:0.01]
TGATGGTGAG TTTTCTTGAA TCAAAAAGAG AAAGGAAGCA AGGCAGTGAT 1550
TTTAATGTTT ATGGAAACAA AGTAATTATT TGGAACTGAA CTTGATATGA 1600 | var(1586):[T:0.01]
TTCAGCACTA TTAGCAACAT AGATTTTTTT TAAAAATCAG CTCTTCTAAT 1650 | var(1611):[C:0.02] | var(1641):[T:0.18]
TAAGTGATAT TTAGAATTTA AAAGTCAATG TTCATTAATT AAGGTGATTG 1700
AATGGAAATA ATCCATACTT GATTATTTTG CTATCAAAAC AATCCATAAT 1750
TCATTATTTT AGCAAAATAA TCAAGTATGA CAGCCGGGTG CGGTGGATGG 1800 | REPEAT | var(1791):[T:0.01]
CTCACACCTG TAATCCCAGC ACTTTGGGAG GCCGAGGTGG GTGAATCACC 1850 | var(1837):[A:0.36]
TGAGGTCGGC AGTTTGAGGC CAGCCTGGCC AACCTGGTGA AACCCTGTCT 1900 | var(1896):[C:0.18]
CTACTAAAAA TACAAAAAAT TAGCTGGGCA TGGTGGCACA GGTCTGTAAT 1950
CCCAGCTACT CGGGAGGCTG AGGCAGGAGA ATCGTTTGAA CTTGGGAGGT 2000
GGAGGTTGCA GTGAGCCGAG ATCGCGCCAC TGCACTCTAG CCTGGGCAAC 2050 | var(2038):[C:0.18]
AGAGCAAGAC TTTGTCTCAA AATAAATAAA TAAATAATAA CAATAAAGTA 2100
TGTGAATATT ATGTTATCAG CTCATTATCT GTCTGATGTT CTTTTCATAA 2150 | var(2124):[G:0.01] | var(2136):[C:0.01]
AGGTGTGACC AATTCAGTGA AAGGAACGAA TGCGATTCTC TGGACCTGTT 2200 | Exon 2 | var(2183):[T:0.01]
  S  V  T   N  S  V   K  G  T  N   A  I  L   W  T  C   59
TGGGACTGAG CTTAATAATT TCTTTGGCAG TTTTCGTGCT AATGTTTTTG 2250 | var(2215):[G:0.01] | var(2245):[G:0.01]
L  G  L  S   L  I  I   S  L  A   V  F  V  L   M  F  L  76
CTAAGGAAGA TAAGCTCTGA ACCATTAAAG GACGAGTTTA AAAACACAGG 2300 | var(2264):[A:0.03]
 L  R  K   I  S  S  E   P  L  K   D  E  F   K  N  T    92
TTGGTTTGAT GGTGAATCTT TGAAATCTAT TTCCAGGGGA TGGCTATTGT 2350 | var(2337):[A:0.01]
GAGTTTCAGT TCCTTTTCTT TTTTTAGCGT TGACTATTTC ACTTCGTTAC 2400
AGCCCTTTCG AATGTGTTAG AACATTGTTA CATTAAATGA ACTTGGTAGA 2450 | var(2402):[A:0.01]
GGTGAGCCAT CTTCATTCTG ATTTTGACAC CTTGGCAGAT TTTCTACAAT 2500
GTCAGTCTTC TCCAGGATTC TTCCACTGTT AATTACTCTA TTGAAAGTAC 2550
TAAGGCTTTC TTGGGAAACA TCAGTCTCTT TGACTAAAGT TAGCACATCG 2600
ATTAAATGCC ACATTATCAG AAACTCCTAG CCAGGTCTGC TACTGTCAGG 2650
AAAAGCATAT TTGTCAAGAT CTATGGTCAT GTTTTTATAC AAATATAGGT 2700 | var(2680):[C:0.11]
GTTCTTTGCT TGAGTGAACA TTTTACTACT GAAAAATGTT AGAAATGAAT 2750
AACCAGTTGC TCCTGAATTA TTTGAGGAAT CATCTAAAAA ATAATTATTT 2800 | var(2782):[T:0.15] | var(2790):[T:0.02]
TTAAGCAATA GAGAACCAGT CCCAGAAAAA TGAATGTTCT ACTTAAGTGC 2850
CTCTTAAGAT AAAAATACTT CTGCAGCACC TTTGCTCATG ATTGGATTCC 2900 | var(2885):[G:0.01]
CAAGCATGTA CAGCCACTGC CCTATTTCTG TATGCATTTA TTTATTTATT 2950 | REPEAT
TATTTATTTA TTTATTTATT TATTTAGAGA TGGAGTCTCG CTCTGTGGCC 3000 | var(2982):[T:0.01]
CAGGCTGGAG TGCAGTGGCG TGATCTCAAC TCACTGCAGC CTCTGCCTCT 3050 | var(3047):[T:0.01]
TGGGTTCAAA CAATTCTCCC ATCTCAGCCT CCTGAGTAAC TGGGACTATA 3100
GGTATGTGCC ATCACCTCCG ACTAATTTTT GTACTTTTTG GTAGAGACAG 3150
GGTTTCATCA TGTTGGCCAG GATGGTCTCA AGCTCCTGAC CACAAGTGAT 3200
CTGCCCGCCT CAGCTTCCCA AAGTGCTGGG ATTACAGGCG TGAGCCACAG 3250 | var(3235):[T:0.01]
GGCCCAGCAC ATACTCATTC TTTTTTACTG AAAAGATCTG TTTCAAGCTG 3300 | REPEAT | var(3298):[A:0.03]
GGTGTGGTGG CATGGAGCTG TAGTCCCGAC TGCTCTGTAG GCTAACGTGG 3350 | var(3311):[T:0.01]
GAGGATTGCT TGAGCCCAGG AGTTTGAATG CAGCCTGGGC AACACAGTAA 3400
GACCCCACCT CTAAAAAATG AAAAAATCTC TCTCACATTG CTTTGAGTCC 3450
CGATGTGTAC TGCTAAGACT CTCATGACCA CATTCTCTGT GAAGTTTGGG 3500
TTAATGTTTC CGTTTCTACA TAATTAGGAT CAGGTCTCCT GGGCATGGCT 3550 | Exon 3
                             G   S  G  L  L   G  M  A  100
AACATTGACC TGGAAAAGAG CAGGACTGGT GATGAAATTA TTCTTCCGAG 3600
 N  I  D   L  E  K  S   R  T  G   D  E  I   I  L  P  R 117
AGGCCTCGAG TACACGGTGG AAGAATGCAC CTGTGAAGAC TGCATCAAGA 3650
  G  L  E   Y  T  V   E  E  C  T   C  E  D   C  I  K   133
GCAAACCGAA GGTCGACTCT GACCATTGCT TTCCACTCCC AGCTATGGAG 3700
S  K  P  K   V  D  S   D  H  C   F  P  L  P   A  M  E  150
GAAGGCGCAA CCATTCTTGT CACCACGAAA ACGAATGACT ATTGCAAGAG 3750 | var(3727):[A:0.17] | var(3744):[C:0.01]
 E  G  A   T  I  L  V   T  T  K   T  N  D   Y  C  K  S 167
CCTGCCAGCT GCTTTGAGTG CTACGGAGAT AGAGAAATCA ATTTCTGCTA 3800 | var(3775):[A:0.10]
  L  P  A   A  L  S   A  T  E  I   E  K  S   I  S  A   183
GGTAATTAAC CATTTCGACT CGAGCAGTGC CACTTTAAAA ATCTTTTGTC 3850 | UTR
R                                                      184
AGAATAGATG ATGTGTCAGA TCTCTTTAGG ATGACTGTAT TTTTCAGTTG 3900
CCGATACAGC TTTTTGTCCT CTAACTGTGG AAACTCTTTA TGTTAGATAT 3950
ATTTCTCTAG GTTACTGTTG GGAGCTTAAT GGTAGAAACT TCCTTGGTTT 4000
CATGATTAAA CTCTTTTTTT TCCTGA
CATC TAAGTTTTTA TTAACGTGAG 4050 | var(4011):[G:0.39]
TTTTTAAAAA CAAGCATGTA TACCAGTGTG GGGGGTGAGG GTGGGAGAGA 4100 | var(4082):[A:0.01]
AAGGTGGGAG GGGGAAAGAA TTCTAACCTA TTGATAATAA AGCTCCAGTT 4150
TTGGCCAGGC GCGGTGGCTC ATGCCTGTAA TCCCAGCACT TTGAAAGGCC 4200 | REPEAT
GAGGCGGGCA GATTACCTGA GGTCAGGAAT TTGAGACCAG CCTGGCCAAC 4250
ATGGTGAAAC CCTGTCTTTA CTAAAAATAC AAAAATTAGC TGGGCATGGT 4300
GGTAGGCACC TGTAATCCCA GCTACTCAGG AGGCTGAGGC AGGAGAATCG 4350
CTTGAACCTG GGAGGTGGAG GTTGCAATGA GCTGAGATAG CATCCCTGCA 4400
CTCCAGCCTG GGCAAGAGGG TGAGACTCCG TCTCAAAACA AAACAACACA 4450 | var(4410):[C:0.01] | var(4429):[T:0.11]
AACAAACAAA AAGACCTCCA GCTTCATCTT CTGCTGGATT TTATAGTGCC 4500 | NOT SCANNED
CCAAAGATAT GTGGTCCTTA AAAATTGTAT ACCACTTATT CAGGAGTCTT 4550
GTTCCTGAAA GGGTTGTTCT TGTTACAGCC CTAGTCTGGG CTGTAATCAG 4600
CTTCTTAAGG TCCACAATGG TGTTATCTGT GTAGCATTTA ACACAGACCT 4650
TCTCCACACT ATCCACTCTC CACTGAGGTT GTTGCAAACA ACCTCAATCA 4700
TCCTAGCTGA TGCTCATCAC CTTGAACATG CTGACATGAC AATCTTCTCA 4750
CTAGAGACCT CTAAACGCTT GACTTACTGA AAAAAACAGC ATTCTGTAGA 4800
TCTCAGTAAC CAATTTCTTT TTCTTTTCTT TTTTTTTTTT TTGAAACGGA 4850 | REPEAT
GTCCTGCTCT GTTGCCCAGG CTGGAGTGCA GTGGCATGAT CACAGCTCAC 4900 | var(4898):[T:0.02]
TACAACCTCC ACCTCTCAGG TTCAAGCGAT TCTCTTGCCT CAGCCTCCCG 4950 | var(4944):[T:0.02] | var(4950):[A:0.01]
A
GTAGCTGGG ATTACAGGCA CGTGGCACCA TGCCCTGCTG ATTTTTGTAT 5000
TTTTAGTAGA GATGGGGTTT CACTGTGTTG GTCAGGCTGG TCTTGAACTC 5050
CTGACCTCAG GTGATTCACC TGCCTTGGCC TCCCAAAGTG TTGGGATTAC 5100
CGGTGTGAGC TATCGCGCCC GGCCCCAGTC ATACGCTTCT ATGGTTAGGG 5150
CGCTTCTCTC CGATATACAT ACATACAGAT TTCAGGAAGG ATCGGATGTT 5200
TCTCTTGATT TTTGAATTTT ATTTATTTAT TTTTTGAGAC AGTCTCGCTC 5250 | REPEAT
TGTCGTTGAC ACGGGAGTGC AGTGGTGCGA TCTCAGCTCA CTGCAACCTC 5300 | var(5265):[A:0.01] | var(5276):[C:0.01]
TGCCTCCCGG GTTCAAGCAA TTCTCTGCCT CAGCCACCCG AGTAGCTGGG 5350
ATTACAGGTG CCCGCCACTG CGCCTGGCTA ATTTTTGTAT TTTTAGTAGA 5400
GACAGGGTTT CACCATCTTC GCCAGACTGG TCTTGAACTC CTGACCTCGT 5450
GATCCACCTG TCTTGGCCTC CCAATGTGCT GGGATTACAG GCGTGAGCCA 5500 | var(5472):[T:0.01] | var(5474):[G:0.01]
CTGTGCCTGG CCTTTTCTCT TTATTGTTAA AGGAAAGCTA ACTTATGTAC 5550
TTCTGCAAAC AGGAGAAGCC TAGAATCAAC CAGACGAATT CAGTGTGCAG 5600
TGCACAGGTG GTTCTTGGCC TTGTGAGCTT CCAGCTTAAT GAAAGCATCA 5650 | var(5640):[A:0.01]
GGCATTACTA TAATTACACA AGTAAATGTG TAATCGCAAA CTGTGATAAC 5700 | var(5700):[T:0.01]
GGTGCACGAC ATACTGTTTT CAGCCCAAAA TGTGAGTGGT GCTATAATAA 5750 | REPEAT
TCATATCTAA CCCTTATATA GTCTTACTAA CGTGCCAGGG ACTGTTCTAA 5800 | var(5752):[:0.01] | var(5769):[C:0.17]
GTGCTTCACC TGTACTAGCT CATTTTATTT TTTTGAGACG GGGTCTTGCT 5850 | REPEAT
CTGTTGCCCA GGCTGGACTG CACTGGCATC ATCTTGGCTC ACTGCAACCT 5900
CTACCTCCTG GGTTCAAGAG TCTCCTACCT CAGCCTCCCA AGTAGCTGGG 5950
ATTACAGGTG CCCGCCACCA CACCCGGCCT ATACTAACTC ATTTTAAGCA 6000
CACAAAAACT CCTGGGTAT