MT2A Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of GeneSNPs

AGCTGCCAGA CATCATGAGA TTTCAAAAGA TCTTGGCTCT AAAATCAGAG 50 | REPEAT
GATGTTTGGA TATAAATTCT AGTACAACCC AGTCATTTGA CAGATGAGTA 100
AACCAGGGAT CAGAAGAGTC CAGGCATGTA ATTGCCCCAA GGTCACTGAG 150
TAAGTGAGTG GCCGAGTGAC CACTGAAATT TAGTCCATCT GAGAGCTCGC 200 | var(157):[:0.01] | var(162):[T:0.13]
CCCCCTGCCC TGTGCGGTGT TTTTACAAGA GTGAGCACGC AGGTTCCAGG 250
GTGGTCAAGA GGTGTTTACT TTCATTTTGT AGTCGGCCTT CATACAAGGT 300
GGGGGCTGGG AAGGGAAGAG CAGTCCAGGC CATTACCCCC ATGAATTCAT 350 | REPEAT
TTGACAAATA TTTATTAAGC GTCTACTGCA AACTTGGCCC GGTGCTGGAA 400
GCTGAAGACA CAATTCCAGA GGCAGACAAT GACTGCCCTT GGCATTTCCA 450
GTGGTCAGGG GTTGGTGAGG AGGGGCAGAG ACACCAATCC AAGAGTCCCC 500 | var(455):[C:0.04]
GCAGTTTATA CATACCACAG GCACGGAAAG CGCCAGGAGG GGAAAGAACA 550
GGATGTTTAC CAGCACCTTC CACAGGCAGC CACGGTCATG GGGGTCAGGA 600 | REPEAT
CAGGGTCCCC AGAGGAAGTG ACGATTCGGC TGAGCTAGAA AGACATTTCC 650
ACAGGAACTT ACAGTAAGGG CTGCAAGGAC AGCCTGTCCT CCCCCGCCCA 700
CCACCTCACT AAACTTTCAC TGTGGCAATC GGCATTCCCT AAGCCTGCCA 750
GGAAGCTTCC AGTAACCACT TCCTGACTCC TAGCATGACA CACTTCGGGC 800
CTTCCAAGGT TGACGATCTA AGGCCCTTAC ACAGCGCCAG ACACGCGCAG 850
GCAGGGAGGC AGGATGTGCC TCTCCAGACA GGAATGTGGA CGCCACCTGG 900
GCTCTTCCCC TCAGCCTCCA CAGGGGAAGA ATATTCTTGT GGGGTTTTTC 950
CCTTCCAAAT GTCTCAGGGC GATTCCAGTG TTCCCGCTAG TTCCTCCCTC 1000
CCAGGCTAGA ACACAAATCC TTCCCCCTCC CTGCCTGGCA AACACCTTCT 1050 | var(1026):[A:0.18]
GACCCTCAGG CCCAAGGCAA TGGCCCACCT CCTCCCAGGC TGGATGGGGT 1100
CTCCTCCTCT CTGTTCCCCC AGCCCCTGAG CTTCCTGAGG ACCAAGCTTG 1150
TGGCTTCTTC TCCTTACTCT TCCTCCTTGG TGTCTCTATG TTAGAGGGCC 1200
GTTAGCATCT GCTGGGGCCT GGTCGCATTC ACCCTGCTCT GCCACTCACT 1250 | REPEAT
GGCTGTGTGA CTCTGGACAA ATTAACTTCT CTGGACCTGC AGTTTCTCCT 1300 | var(1264):[C:0.01]
CTCTACAATG AGAATACTGG AGAGTCCTTA TCTTATGGGT TGCTACAGAA 1350
TTAAGTGACA TCTCACACAC AACACACTTC CTACAGTCCC TGTTACACGC 1400 | var(1372):[G:0.01] | NOT SCANNED
TAAAAGTACT CAACA
TGCAA CGGATACGTC ATCAGTAACC ACCCCACGGG 1450
TTTACTGTGA TGCTGCACAA TTATTAAGCC TTGGCTGCTA CAGAGTTGTA 1500
ACCTGTCTGC ACTTCCAACC GGTTTGGGAA TGCAAGCAGC ATTCCCAAGT 1550
CCCGCTTTCA CCCGCGCGCT AACGGCTCAG GTTCGAGTAC AGGACAGGAG 1600
GGAGGGGAGC TGTGCACACG GCGGAGGCGC ACGGCGTGGG CACCCAGCAC 1650
CCGGTACACT GTGTCCTCCC GCTGCACCCA GCCCCTTCCG CGCCGAGGCG 1700
TCCCCGAGGC GCAAGTGGGC CGCCTTCAGG GAACTGACCG CCCGCGGCCC 1750
GTGTGCAGAG CCGGGTGCGC CCGGCCCAGT GCGCGCGGCC GGGTGTTTCG 1800
CCTGGAGCCG CAAGTGACTC AGCGCGGGGC GTGTGCAGGC AGCGCCCGGC 1850 | var(1809):[A:0.01]
CGGGGCGGGG CTTTTGCACT CGTCCCGGCT CTTTCTAGCT ATAAACACTG 1900
CTTGCCGCGC TGCACTCCAC CACGCCTCCT CCAAGTCCCA GCGAACCCGC 1950 | var(1914):[G:0.06] | Exon 1 | UTR
GTGCAACCTG TCCCGACTCT AGCCGCCTCT TCAGCTCGCC A
TGGATCCCA 2000
                                             M  D  P   3
ACTGCTCCTG CGCCGCCGGT AAGAGGCTGG GGATGCCCAG TGTAGACTGT 2050 | var(2040):[C:0.01]
N  C  S  C   A  A                                      9
AGCGCTAGAG AAGCAATTTC TGACCCCTCT TTCTTTCTCT GGTCACTCAA 2100
TTTCAGGACA GGAGTTGCTC CTTCCCAAAG AGTTTTGGGG TATCTTTCTC 2150
TCCATTCTAG GTTATTCGGA GCCCCCTTTT TACCGTTAAG GAGATCTGAG 2200
TTAATGGCTT GCTCAAGTTC CCAGGAATCG GTTGTGGACT GAGGAACTCG 2250
GCCCCGGGCT CTTAGTACGC CGTCCCTTGT TCAGGTATCC AGGGACGGTT 2300
CTCACCTCTG TCTTTTCTCC TTGCAGGTGA CTCCTGCACC TGCGCCGGCT 2350 | Exon 2
                            G  D   S  C  T   C  A  G   17
CCTGCAAATG CAAAGAGTGC AAATGCACCT CCTGCAAGAA AAGTAAGTGG 2400
S  C  K  C   K  E  C   K  C  T   S  C  K  K            31
GATCCTCTCT TTCCTCTACC CCTTCCCTGT CCTCCAGCCT GTCCCCTCTC 2450
CACCATCCTC AGGGGAATTA AAGCAGTCTG GGGATGCCCC ATTGCGCGGA 2500
AATTGTTGCC TCCTCAGTGA TCCTTATCAG GGAGAGCAGG AATCCTTATT 2550
CCCGGTGTCG CTAGTACTCA TCTCTGCCGC CTCCTGTCTG CCCCCAGGCT 2600 | var(2560):[C:0.05] | Exon 3
                                                   S   32
GCTGCTCCTG CTGCCCTGTG GGCTGTGCCA AGTGTGCCCA GGGCTGCATC 2650 | var(2628):[T:0.01]
C  C  S  C   C  P  V   G  C  A   K  C  A  Q   G  C  I  49
TGCAAAGGGG CGTCGGACAA GTGCAGCTGC TGCGCCTGAT GCTGGGACAG 2700 | UTR
 C  K  G   A  S  D  K   C  S  C   C  A                 61
CCCCGCTCCC AGATGTAAAG AACGCGACTT CCACAAACCT GGATTTTTTA 2750
TGTACAACCC TGACCGTGAC CGTTTGCTAT ATTCCTTTTT CTATGAAATA 2800 | var(2766):[C:0.29]
ATGTGAATGA TAATAAAA
CA GCTTTGACTT GATTCTGTCT CTGGTTTCCT 2850 | var(2827):[C:0.01]
TTATATGCCT TAAAAATAAC GGACTGGGGT GAGGGATTGA ACTGGGAGGG 2900 | var(2866):[G:0.03]
CAGAGACCTG GGCTGTGGAT GGAAATGTGA GCCGTTAAGA AAGAGTGCAT 2950 | var(2934):[A:0.03] | var(2938):[G:0.01] | var(2940):[G:0.23]
TCTGGCAAGC CAGGCTACTG CACTGAGCTT CAGCTTCTGT AAAACTGAAT 3000
GGCGCTGTGC CAGATCATAT GGGAGCAGGA GGGACACATA CATGATCACT 3050 | var(3017):[G:0.07]
TTCAGTTTCA CGTCAAATGT GGCACAGAAA CTTCTCCATT CCTCACTTTT 3100
ACTTTCAATT TCCCTGCCCA ACTTCAGTTC TTCGTGGGAT TTTAGACTTG 3150
AAAGTGACTA CAGAGGGTGA AATCCAACTC CCCAGTGGCT GGAATCTGAC 3200 | var(3173):[G:0.05]
ATCCGGTTTC CCAAACTCCC TGTGGGGAAT GACCAGTTTT GTTTTGTTTT 3250
GTTTTGTTCT CCATTAGTCA CAGACCTAAA CTCTGGTAAA ATAAGGAGTT 3300 | REPEAT
AATAAGAAAA TGAAAGTTTA AAAGACACAA AATACAAAGA CAATTTTTTA 3350
GATTCAACAG GAACTTTTCA ATAAATATAT GAACAAATTA ACATAGGAAA 3400
AATAAAAGAA TTACCAACAC TACACATTTG TCCAAGGGTG TGCATTGCAT 3450
CCTGGAAACA GTTCTCAGAC TGGCCCCAGT GCGTGGCTGG CACACCCTGA 3500
GCAGCACTGA TCCAGACATC CCCACAAGGA ACCGTCAGGC TTGTGCTGCC 3550 | REPEAT | var(3534):[A:0.01]
CAGTGTCACT GACAGGACAC TCACTCGCAC ACCCCTGAGA GCTCCCTGTT 3600
TTGCCTTGGT TCTGAATCTT TGTAAGTTCC TCCCAAGGTC AGGCTGAATT 3650
TACTCCTCTC AAATTTCAGC CGTTGGCTAC TTAAACCGTC AAAGTGGCTG 3700 | var(3688):[A:0.10]
GGGATGTGGA GGGAAATGCC CAGCATGTTC CCAGCAAGAT GCAGTGTGTG 3750
TGATCATGGG TTGCAGAAGA CGTTCTTCCT GTCTGCCCAC GCAGGGGTGA 3800
TGGCATTCAG CAGTTTGGAG GGTGTGGTGG CGCTCTTTAG AAAGGAGTGA 3850
AGCTCTGAGT GACTTGTAAT TAAAGCCAAC GGTTAGTCCC CCTGGCTATG 3900 | var(3881):[A:0.01]
CGGAGGGAAT GTTATTTGAT GTTCAGTCAA AGAGGAGGAT GAGTGCCTTG 3950 | var(3932):[C:0.01]
GCCCAGGAAT CAGGAGCACA CTTGCCTGAA GGTGCTCCTT ATAGAGTTTT 4000
AGAAGGCAAC CTGAGCCAAG GGCATGGGTT TTCATGTCAG GCAGTCCTAG 4050 | REPEAT
TTCACAGCCC ACTTTACCAC TTCCTGGCTG TGTGGCCTGG GCAAGTCACT 4100 | var(4073):[A:0.37]
CAACCTCTCT GAGCCTACAT TTCCTCATCT GTAGAAAAAA GATGGTATCC 4150
CTATTTATGG ATTAAATGAG ATCTTGGCCT GGCTCCTGGC TAGGGTTTAA 4200
TGACCACTAG GATCACTCTG TTTACATGGA CTTTGTTGGA GACAGAATCT 4250
CTCTTGATAA GCTCTTGGGG AAAAACGGGT CTGGGAAGAA TTACTCTGGG 4300
TCAGAGGCTG GGGAGTGGAA TGAAGCTTTC CTGACTGTGT ACCAGGGGGA 4350
GGGTGGATGA CTTCCTGCAC AAAGCCCTCT GGGATTAAGA TGCTGCCACA 4400
GCATTTGAAC AAACGTTAAG AACCATTCTA ATTTTTCCTA TCATTTGAAT 4450 | var(4417):[:0.88] | var(4422):[C:0.11]
ACCCCATGAG CCAGTGAAAG AGTGACCGTG CAGGGACGAA ACTGATTCTG 4500 | var(4478):[A:0.11] | var(4488):[A:0.02]
TCATCTTCCA GATGTCATTT TCCCTTCCAA ATGTCTCAGG GTGATTCCAG 4550
TGTTCCCGCT AGTTCCTCCC TCCCCAGGCT AGAACACAAA TCCTTCCCCC 4600
TCCCTGCCTG GCAAACACCT TCTGACCCTC AGGCCCAAGG CAATGGCCCA 4650 | var(4643):[G:0.02]
CCTCCTCCCA GGCTGGATGG GGTCTCCTCC TCTCTGTTTC CCCAGCCCCT 4700
GAGCTTCCTG AGGACCAAGC TTGTGGCTTC TTGCCCTTAT TCTTCCTCCT 4750
TGGTGTCTCT ATGTTAGAAG GCCGTTAGCA TCTGCTGGGG CCTGGTTGCA 4800
TTCACCCTGC TGT