LOCUS AY771351 5413 bp DNA linear PRI 18-OCT-2004 DEFINITION Homo sapiens zinc finger protein 36, C3H type, homolog (mouse) (ZFP36) gene, complete cds. ACCESSION AY771351 VERSION AY771351.1 GI:54112077 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5413) AUTHORS Livingston,R.J., Rieder,M.J., Chung,M.-W., Ritchie,T.K., Olson,A.N., Nguyen,C.P., Nguyen,D.A., Poel,C.L., Chambers,S.W., Schackwitz,W.S., Sherwood,J.K., Sherwood,A.M., Leithauser,B.J. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (06-OCT-2004) Genome Sciences, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478, Department of Genome Sciences, Seattle, WA (URL: http://egp.gs.washington.edu). FEATURES Location/Qualifiers source 1..5413 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" repeat_region 140..435 /rpt_family="Alu" /rpt_type=dispersed variation 168 /frequency="0.01" /replace="a" variation 431 /frequency="0.01" /replace="a" variation 435 /frequency="0.01" /replace="t" variation 725 /frequency="0.01" /replace="g" repeat_region 890..1004 /rpt_family="Alu" /rpt_type=dispersed misc_feature 899..1127 /note="Region not scanned for variation" repeat_region 1005..1137 /rpt_family="Alu" /rpt_type=dispersed variation 1138 /frequency="0.02" /replace="a" repeat_region 1166..1205 /rpt_family="Alu" /rpt_type=dispersed variation 1320 /frequency="0.01" /replace="c" variation 1545 /frequency="0.01" /replace="a" variation 1588 /frequency="0.48" /replace="g" variation 1723 /frequency="0.01" /replace="a" gene 1782..4340 /gene="ZFP36" mRNA join(1782..1863,2678..4340) /gene="ZFP36" /product="zinc finger protein 36, C3H type, homolog (mouse)" CDS join(1840..1863,2678..3634) /gene="ZFP36" /codon_start=1 /product="zinc finger protein 36, C3H type, homolog (mouse)" /protein_id="AAV28731.1" /db_xref="GI:54112078" /translation="MDLTAIYESLLSLSPDVPVPSDHGGTESSPGWGSSGPWSLSPSD SSPSGVTSRLPGRSTSLVEGRSCGWVPPPPGFAPLAPRLGPELSPSPTSPTATSTTPS RYKTELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGS RCHFIHNPSEDLAAPGHPPVLRQSISFSGLPSGRRTSPPPPGLAGPSLSSSSFSPSSS PPPPGDLPLSPSAFSAAPGTPLARRDPTPVCCPSCRRATPISVWGPLGGLVRTPSVQS LGSDPDEYASSGSSLGGSDSPVFEAGVFAPPQPVAAPRRLPIFNRISVSE" variation 2008 /gene="ZFP36" /frequency="0.01" /replace="t" variation 2276 /gene="ZFP36" /frequency="0.01" /replace="t" variation 2491 /gene="ZFP36" /frequency="0.01" /replace="g" variation 2762 /gene="ZFP36" /frequency="0.01" /replace="t" variation 2962 /gene="ZFP36" /frequency="0.05" /replace="t" variation 3428 /gene="ZFP36" /frequency="0.01" /replace="t" variation 3472 /gene="ZFP36" /frequency="0.02" /replace="c" variation 3511 /gene="ZFP36" /frequency="0.01" /replace="t" variation 3623 /gene="ZFP36" /frequency="0.01" /replace="t" variation 4178 /gene="ZFP36" /frequency="0.01" /replace="g" variation 4217..4218 /gene="ZFP36" /frequency="0.13" /replace="" variation 4545 /frequency="0.01" /replace="t" variation 4548 /frequency="0.01" /replace="t" variation 4584 /frequency="0.01" /replace="t" variation 4915..4930 /frequency="0.03" /replace="" variation 5179 /frequency="0.06" /replace="" ORIGIN 1 tcaatcaatg caaccatcag ttatagtgaa agacctccac cttgccaatc ttgagttttc 61 tcagagggca aacctcgaca taatttcaga ccctagtatg aggcctgtgc catttgctag 121 ctcgaactag gagagtaact ttatttttcc ccctgagagg gagtctcgct ctgtggccca 181 ggctggagtg cagtcgcctg atctcggctc attgcaacct ctgcctcctg ggttcaagcg 241 actctcccac cccagcctgc tccctccccg cccccgagta gcgggaccac agggtgtgcg 301 ccaccacact cagctaattt ttgcattttt gtagaaatgg ggattcgccg tgttgcccag 361 gctagtctca gactccgagc tctagtgatc cgcctgcctt gggcgcccaa agtgctagga 421 ctacaggtgt gagccgggca ggagagtaac ttcactttgg tttcctcctg ccttaaatgg 481 gcataccacc tggcattagg attaatgtgc gtaaagtact tagaactcag cccaggtgag 541 ttctccttaa ctcagcctag aagagatcat ccgcccgagg gtgagggggc tagagccgcc 601 ctgtgaattg ggaaaggagg ccccttttca gccttgccag gtatcctgga ccccacccaa 661 cccactcact cacccaccca accccagcaa gtggggagag ggagagcagt ccaggtctcc 721 ttatctgtct gggctgttta ggagtgagac cacacaaggc aggcagttct cagagaattc 781 ccctccaagg cctgctggct ctttcttggc actttgctct gcagatttct ttccgtaagt 841 gcttatttct cacagtcttt ctcctttttg tccagtttct ttttcttttt aattttttta 901 aatagtattt tttgtagaca tgggatctca ctgttgccca ggctgatctt gaactcctga 961 tctcaggtaa tccacctgcc tcatcctctg aaagtactgg gattggccgg gcttggtggc 1021 tcacacctgt aattccagct ctttgggagg cggaggtggg aggatcgctt gagccccgga 1081 gctggagatt agcctgggca acatagggaa accccgtctt tcaaaaaaaa aaaaaaagaa 1141 gaagaaaaag gaaagaaaaa cacaaaaagt gctgggatca caggtgtgag ccactgcgct 1201 cagccccttt ctgtttcttt ttgtgatcct cccaaccctc ttctccctct gaatctgtct 1261 ctgggactgt ctctgtctcc ccgtcttccc tcccttcctc accctgtcta tctctctctg 1321 tatgtctctt ggtgtgtgtg tctctctcga tgtttttctc tctgcctgtc tgcctgtctg 1381 tacccctctg cgtctctccc cgcccccatc cgtctgtgtc gcacgcgcac ccccatcggg 1441 cttctgctct tgtcaattgc ccctggggcc ctgcccccac ctccgcccca gtttccttct 1501 acaagcctca gtctccagct ttgaaaactg ggcaggcgtc cccccatccg cacccccacc 1561 ccttccccac gcattccccg ctcggtcacg gctgtccacc ggccaagctc aggcgcgtcc 1621 tggcccaggg ccgggcggaa gggaaccagt ccagggccag ccaggctgcg ccgggggcgc 1681 gcgtccggga agcgcccctc ctgccccgcc cccggccccg gccccggccc cgccccgtgc 1741 ttgcagtttc ctataagtag ccggctctcg gtgccagcct cagcctgact tcagcgctcc 1801 cactctcggc cgacacccct catggccaac cgttacacca tggatctgac tgccatctac 1861 gaggtgagtc cccgccgcac ggcatccccg gtacctgcat gcctgagtcc gagtccccac 1921 ctctctagcg ccgcaaactc cagcccggga cgcttgcctc ccttctccaa ctggggctcc 1981 ctagcgccgc gccctccagc ctggggcccc tgcctcccgc tcagaccagc ttggtgattt 2041 ggaggtgaaa atggaacccg cgacacccgg ctcttcgctc aaacatgggt ggggcggccc 2101 atgcaagtgg aaagtcggag aacttttctc agaccgaggc tgcctggagg cggaagtggc 2161 ccccatacct ggctcacccc tagtcgttgc tgagggcgtg gttttgcgcg gaggcgtctc 2221 tggggctgaa gtctcagggt ggggggatcc gacttctgtc tctccagtcc ctgaccgtag 2281 agacagagaa ccctaaaacc gaagcaatcc ggacttccag gtcaactttg cccggtttct 2341 ccagttgtga aactggagat cccgacgcgt gggtcatatc cggggaggac aagagaccca 2401 aaattgggaa acagtggtgc gccctgactt cggggtcccc ctcttggtcc agccggggaa 2461 gccgggattc ctgggtccct cgggataagg cctcggtggt gggtaaactc agaacctcca 2521 actctgggtt cctggcatcc ggaacccagg ggtttctgcg ggcgggtggg gctcaggcgg 2581 ggagcccaca aaccggcctg gcaagctcta gttccctgca gctggggtgg ggcgtcgccc 2641 tgcattttca ggtgccttaa ccgacccatt tccgcagagc ctcctgtcgc tgagccctga 2701 cgtgcccgtg ccatccgacc atggagggac tgagtccagc ccaggctggg gctcctcggg 2761 accctggagc ctgagcccct ccgactccag cccgtctggg gtcacctccc gcctgcctgg 2821 ccgctccacc agcctagtgg agggccgcag ctgtggctgg gtgcccccac cccctggctt 2881 cgcaccgctg gctccccgcc tgggccctga gctgtcaccc tcacccactt cgcccactgc 2941 aacctccacc accccctcgc gctacaagac tgagctatgt cggaccttct cagagagtgg 3001 gcgctgccgc tacggggcca agtgccagtt tgcccatggc ctgggcgagc tgcgccaggc 3061 caatcgccac cccaaataca agacggaact ctgtcacaag ttctacctcc agggccgctg 3121 cccctacggc tctcgctgcc acttcatcca caaccctagc gaagacctgg cggccccggg 3181 ccaccctcct gtgcttcgcc agagcatcag cttctccggc ctgccctctg gccgccggac 3241 ctcaccacca ccaccaggcc tggccggccc ttccctgtcc tccagctcct tctcgccctc 3301 cagctcccca ccaccacctg gggaccttcc actgtcaccc tctgccttct ctgctgcccc 3361 tggcaccccc ctggctcgaa gagaccccac cccagtctgt tgcccctcct gccgaagggc 3421 cactcctatc agcgtctggg ggcccttggg tggcctggtt cggaccccct ctgtacagtc 3481 cctgggatcc gaccctgatg aatatgccag cagcggcagc agcctggggg gctctgactc 3541 tcccgtcttc gaggcgggag tttttgcacc accccagccc gtggcagccc cccggcgact 3601 ccccatcttc aatcgcatct ctgtttctga gtgacaaagt gactgcccgg tcagatcagc 3661 tggatctcag cggggagcca cgtctcttgc actgtggtct ctgcatggac cccagggctg 3721 tggggacttg ggggacagta atcaagtaat ccccttttcc agaatgcatt aacccactcc 3781 cctgacctca cgctggggca ggtccccaag tgtgcaagct cagtattcat gatggtgggg 3841 gatggagtgt cttccgaggt tcttggggga aaaaaaattg tagcatattt aagggaggca 3901 atgaaccctc tcccccacct cttccctgcc caaatctgtc tcctagaatc ttatgtgctg 3961 tgaataatag gccttcactg cccctccagt ttttatagac ctgaggttcc agtgtctcct 4021 ggtaactgga acctctcctg agggggaatc ctggtgctca aattaccctc caaaagcaag 4081 tagccaaagc cgttgccaaa ccccacccat aaatcaatgg gccctttatt tatgacgact 4141 ttatttattc taatatgatt ttatagtatt tatatatatt gggtcgtctg cttcccttgt 4201 atttttcttc ctttttttgt aatattgaaa acgacgatat aattattata agtagactat 4261 aatatattta gtaatatata ttattacctt aaaagtctat ttttgtgttt tgggcatttt 4321 taaataaaca atctgagtgt aagctgggat cctggcttct tcgcggtcta gagacaggaa 4381 tggagaggga gggggtgact ttttggaagc tgggtgcagt taactcttcc tctccgagcc 4441 ccgcggcgct tacctggcag gaagtgacgt caccgggcct ggccgttcac ctgaaagggt 4501 gggaccaggt gaggtcacca gatgggaacc gggggagcca gttcccgggc gtcgggggcg 4561 ccgcgctccc gtcctgctgg gctccttgac ccagcttcgg gcgggtgcgg tcggggacgg 4621 gatgtttccg tccccacggg gccgcgggag gcgggagggg ccgggtgggg aggacggaat 4681 gtgctggggc gcgcgcccag agcgagcggg ggcgggcgcg gggcggggca gcctggggta 4741 gcggaacccg tttcgggact agaggttccg ggggggcttc gacaccttct ggatgttggg 4801 gaagcgggtt tagggtctca agaggctagg atctcaacat ttgggagtca caggttgcat 4861 cccctagcgc tttagactct agacccctgg tggctcggag ttgcagattt ctggccaccc 4921 gggaccctgg agcccgggaa ttaccgggtc ttggcatttc cgaaccttgg aagtccgagg 4981 cttcgcacac cgaccagggt cggccccgcg aggccagggc gtgtgggtag gggccgcgcg 5041 tctaggaggg gccccggggg agccgcgtct tcagaccata caaggccagc gtcgtcggga 5101 ccaaccccgg ggccccgcgc ccggaagccg ccctgcgtca gcgcctgcgg ctcggccctg 5161 ccgcccagcc ttcgccccct gcgacccctc ttttttctcc ttgccccgca ctcctccctc 5221 ctccctctca cttccctctt ctctcctttc cctaccctca cccttcctcc tctttttcac 5281 ttcctcctct gcacccttct gccccgccct acaccctttg ccttctgttc ttctctcccc 5341 ctccaatttg tcccctccct cattactcct ctcccacttc cagcctcccc atcctgccgt 5401 ctcttacccc ctt //