Site CDNA-Pos Description Allele1 Total-freq Allele2 Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000310 00000 ------------ G 0.98 C 0.02 0000 --- --- --- --- 000323 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 000724 00000 ------------ T 0.91 C 0.09 0000 --- --- --- --- 000744 00000 ------------ A 0.51 G 0.49 0000 --- --- --- --- 000979 00000 ------------ C 0.97 A 0.03 0000 --- --- --- --- 001120 00052 5' UTR G 0.99 A 0.01 0000 --- --- --- --- 001320 00252 5' UTR G 0.95 A 0.05 0000 --- --- --- --- 001359 00291 5' UTR - 0.01 + 0.99 0000 --- --- --- --- 004305 00000 ------------ T 0.99 A 0.01 0000 --- --- --- --- 004332 00000 ------------ - 0.47 + 0.53 0000 --- --- --- --- 004502 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 004531 00000 ------------ C 0.53 T 0.47 0000 --- --- --- --- 004541 00000 ------------ A 0.53 G 0.47 0000 --- --- --- --- 004810 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 004938 00000 ------------ G 0.84 C 0.16 0000 --- --- --- --- 005270 00000 ------------ T 0.62 C 0.38 0000 --- --- --- --- 005390 00000 ------------ C 0.53 T 0.47 0000 --- --- --- --- 005527 00000 ------------ T 0.91 C 0.09 0000 --- --- --- --- 005593 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 005694 00000 ------------ G 0.52 A 0.48 0000 --- --- --- --- 005738* 005841 00000 ------------ A 0.53 T 0.47 0000 --- --- --- --- 005977 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 006143 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 006185 00000 ------------ C 0.84 T 0.16 0000 --- --- --- --- 006386 00000 ------------ - 0.75 + 0.25 0000 --- --- --- --- 006596 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 006667 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 006750 00000 ------------ - 0.49 + 0.51 0000 --- --- --- --- 006821 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 006830 00000 ------------ - 0.50 + 0.50 0000 --- --- --- --- 006853 00000 ------------ T 0.51 C 0.49 0000 --- --- --- --- 006934 00000 ------------ G 0.51 T 0.49 0000 --- --- --- --- 006951 00000 ------------ T 0.91 C 0.09 0000 --- --- --- --- 006969 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 007085 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 007146 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 007267 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 007299 00000 ------------ C 0.90 T 0.10 0000 --- --- --- --- 007364 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 007372 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 007435 00000 ------------ T 0.99 G 0.01 0000 --- --- --- --- 007482 00000 ------------ G 0.92 A 0.08 0000 --- --- --- --- 007633 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 007845 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 008033 00000 ------------ G 0.94 A 0.06 0000 --- --- --- --- 008075 00000 ------------ C 0.99 G 0.01 0000 --- --- --- --- 008126 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 008344 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 008390 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 008408 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 008456 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 008575 00000 ------------ A 0.56 C 0.44 0000 --- --- --- --- 008737 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 009097 00000 ------------ - 0.03 + 0.97 0000 --- --- --- --- 009108 00000 ------------ C 0.98 T 0.02 0000 --- --- --- --- 009137 00000 ------------ A 0.56 G 0.44 0000 --- --- --- --- 009220 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 009344 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 009376 00000 ------------ A 0.57 G 0.43 0000 --- --- --- --- 009808 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 009944 00000 ------------ C 0.91 G 0.09 0000 --- --- --- --- 010401 00000 ------------ G 0.52 A 0.48 0000 --- --- --- --- 010450 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 010480 00000 ------------ C 0.82 T 0.18 0000 --- --- --- --- 010512 00000 ------------ G 0.52 A 0.48 0000 --- --- --- --- 010560 00000 ------------ T 0.52 C 0.48 0000 --- --- --- --- 010624 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 010701 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 010704 00000 ------------ T 0.87 G 0.13 0000 --- --- --- --- 010712 00000 ------------ G 0.58 A 0.42 0000 --- --- --- --- 010788 00000 ------------ T 0.85 C 0.15 0000 --- --- --- --- 010789 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 010800 00000 ------------ T 0.52 A 0.48 0000 --- --- --- --- 010813 00000 ------------ A 0.99 T 0.01 0000 --- --- --- --- 010895 00000 ------------ C 0.52 T 0.48 0000 --- --- --- --- 011366 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 011394 00000 ------------ C 0.52 T 0.48 0000 --- --- --- --- 011408 00000 ------------ A 0.52 G 0.48 0000 --- --- --- --- 011439 00000 ------------ A 0.59 G 0.41 0000 --- --- --- --- 011450 00000 ------------ A 0.51 G 0.49 0000 --- --- --- --- 011452 00000 ------------ C 0.99 G 0.01 0000 --- --- --- --- 011458 00000 ------------ - 0.49 + 0.51 0000 --- --- --- --- 011543 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 011665 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 011926 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 012123 00000 ------------ C 0.99 A 0.01 0000 --- --- --- --- 012177 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 012492 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 012504 00000 ------------ A 0.82 G 0.18 0000 --- --- --- --- 012654 00000 ------------ T 0.89 C 0.11 0000 --- --- --- --- 012913 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 013059 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 013165 00000 ------------ T 0.53 G 0.47 0000 --- --- --- --- 013168 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 013395 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 013590 00392 NON-SYN G 0.94 A 0.06 0016 GCT ACT ALA(A) THR(T) 013685 00487 SYNON G 0.97 A 0.03 0047 CAG CAA GLN(Q) GLN(Q) 013727 00529 SYNON G 0.99 A 0.01 0061 AAG AAA LYS(K) LYS(K) 013914 00000 ------------ C 0.99 A 0.01 0000 --- --- --- --- 013916 00000 ------------ C 0.58 T 0.42 0000 --- --- --- --- 014078 00000 ------------ A 0.97 T 0.03 0000 --- --- --- --- 014336 00000 ------------ C 0.97 A 0.03 0000 --- --- --- --- 014388 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 014706 00000 ------------ T 0.97 C 0.03 0000 --- --- --- --- 014858 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 015290 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 015308 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 015481 00000 ------------ G 0.99 C 0.01 0000 --- --- --- --- 015528 00000 ------------ A 0.56 G 0.44 0000 --- --- --- --- 015653 00000 ------------ T 0.85 C 0.15 0000 --- --- --- --- 015680 00000 ------------ C 0.61 G 0.39 0000 --- --- --- --- 015745 00000 ------------ - 0.12 + 0.88 0000 --- --- --- --- 015847 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 015872 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 016067 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 016201 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 016436 00000 ------------ T 0.94 G 0.06 0000 --- --- --- --- 016543 00000 ------------ A 0.99 T 0.01 0000 --- --- --- --- 017002 00000 ------------ T 0.61 C 0.39 0000 --- --- --- --- 017385 00000 ------------ A 0.88 G 0.12 0000 --- --- --- --- 017400 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 017438 00000 ------------ - 0.12 + 0.88 0000 --- --- --- --- 017714 00000 ------------ T 0.88 C 0.12 0000 --- --- --- --- 017770 00000 ------------ T 0.57 C 0.43 0000 --- --- --- --- 017785 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 018137 00000 ------------ C 0.83 T 0.17 0000 --- --- --- --- 018185 00000 ------------ C 0.87 G 0.13 0000 --- --- --- --- 018272 00568 SYNON A 0.93 G 0.07 0074 ACA ACG THR(T) THR(T) 018430 00000 ------------ C 0.82 T 0.18 0000 --- --- --- --- 019466 00711 NON-SYN C 0.99 T 0.01 0122 ACC ATC THR(T) ILE(I) 019595 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 019755 00000 ------------ A 0.61 G 0.39 0000 --- --- --- --- 019843 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 019861 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 020092 00000 ------------ C 0.98 T 0.02 0000 --- --- --- --- 020245 00000 ------------ T 0.88 C 0.12 0000 --- --- --- --- 020254 00000 ------------ G 0.56 A 0.44 0000 --- --- --- --- 020277 00000 ------------ - 0.92 + 0.08 0000 --- --- --- --- 020452 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 020639 00000 ------------ - 0.98 + 0.02 0000 --- --- --- --- 020685 00000 ------------ G 0.94 T 0.06 0000 --- --- --- --- 020797 00000 ------------ T 0.62 C 0.38 0000 --- --- --- --- 020886 00000 ------------ - 0.44 + 0.56 0000 --- --- --- --- 020939 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 021172 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 021238 00000 ------------ C 0.58 G 0.42 0000 --- --- --- --- 021533 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 021651 00000 ------------ T 0.83 C 0.17 0000 --- --- --- --- 022304 00000 ------------ A 0.92 G 0.08 0000 --- --- --- --- 022411 00000 ------------ G 0.88 A 0.12 0000 --- --- --- --- 022628 00988 SYNON C 0.83 T 0.17 0214 ACC ACT THR(T) THR(T) 022680 00000 ------------ T 0.99 G 0.01 0000 --- --- --- --- 022949 00000 ------------ G 0.88 A 0.12 0000 --- --- --- --- 023071 00000 ------------ G 0.81 T 0.19 0000 --- --- --- --- 023998 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 024097 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 024102 00000 ------------ G 0.50 A 0.50 0000 --- --- --- --- 024162 00000 ------------ C 0.80 A 0.20 0000 --- --- --- --- 024220 00000 ------------ G 0.92 C 0.08 0000 --- --- --- --- 024293 00000 ------------ T 0.60 G 0.40 0000 --- --- --- --- 024324 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 024393 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 024580 00000 ------------ T 0.98 C 0.02 0000 --- --- --- --- 024912 01260 NON-SYN C 0.99 T 0.01 0305 ACT ATT THR(T) ILE(I) 025148 01496 3' UTR A 0.97 G 0.03 0000 --- --- --- --- 025395 01743 3' UTR A 0.99 G 0.01 0000 --- --- --- --- 025571 01919 3' UTR A 0.99 T 0.01 0000 --- --- --- --- 025771 02119 3' UTR T 0.92 C 0.08 0000 --- --- --- --- 026090 02438 3' UTR C 0.83 T 0.17 0000 --- --- --- --- 026132 02480 3' UTR G 0.99 A 0.01 0000 --- --- --- --- 026300 02648 3' UTR A 0.99 T 0.01 0000 --- --- --- --- 026339 02687 3' UTR G 0.99 T 0.01 0000 --- --- --- --- 026428 00000 ------------ G 0.51 A 0.49 0000 --- --- --- --- 026455 00000 ------------ C 0.99 G 0.01 0000 --- --- --- --- 026470 00000 ------------ T 0.99 A 0.01 0000 --- --- --- --- 026535 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 026550 00000 ------------ C 0.98 A 0.02 0000 --- --- --- --- 026555 00000 ------------ A 0.88 G 0.12 0000 --- --- --- --- 026882 00000 ------------ G 0.84 A 0.16 0000 --- --- --- --- 026990 00000 ------------ C 0.98 A 0.02 0000 --- --- --- --- 027133 00000 ------------ T 0.92 C 0.08 0000 --- --- --- --- 027148 00000 ------------ C 0.88 T 0.12 0000 --- --- --- --- 027195 00000 ------------ G 0.83 A 0.17 0000 --- --- --- --- 027219 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 027285 00000 ------------ T 0.88 C 0.12 0000 --- --- --- --- 027295 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 027910 00000 ------------ C 0.87 T 0.13 0000 --- --- --- --- 027973 00000 ------------ C 0.92 T 0.08 0000 --- --- --- --- 028137 00000 ------------ G 0.91 A 0.09 0000 --- --- --- --- 028156 00000 ------------ T 0.99 A 0.01 0000 --- --- --- --- 028175 00000 ------------ T 0.85 C 0.15 0000 --- --- --- --- 028215 00000 ------------ - 0.99 + 0.01 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001359: C 004332: AA 006386: A 006750: T 006821: GTT 006830: T 007845: GTCTTGAGA 009097: T 011458: G 014858: GAA 015745: GAGG 016067: TA 016201: T 017438: A 020277: AGTTGTC 020639: CT 020886: AG 024097: AAT 028215: TC The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 Total-freq Allele2 Total-freq Allele3 Total-freq 005738 A 0.01 G 0.52 T 0.47