Site Allele1 Total-pop Allele2 Total-pop 000219 C 1 T 143 000225 A 17 T 127 000248 T 4 G 140 000249 A 6 G 138 000779 - 1 + 155 000793 C 1 A 153 000807 C 1 T 155 000842 C 3 T 153 001261 A 1 C 179 001550 G 3 A 177 001596 A 6 G 170 001626 T 1 C 127 001692 - 44 + 134 001815 + 1 - 159 001847 + 5 - 163 001976 T 1 G 163 001992 T 1 C 163 002023 + 3 - 147 002212 G 3 C 177 002286 C 1 A 179 002751 C 3 G 159 002775 G 1 A 159 002781 G 2 C 160 003143 A 2 G 178 003224 A 1 G 179 007713 C 63 T 117 007867 A 1 G 179 007905 T 1 C 179 007915 T 4 C 176 007968 A 10 G 170 008211 T 1 C 179 008574 T 1 C 177 008600 A 1 C 177 008661 T 50 C 128 009425 A 1 T 163 009432 C 2 G 162 009684 A 1 G 175 009792 C 7 T 171 010078 A 2 G 176 010226 G 1 A 177 010338 G 4 A 174 010351 T 1 C 177 010363 T 2 C 176 013735 G 3 C 163 013793 T 5 C 159 013876 T 8 C 156 013949 A 1 G 163 013995 A 12 G 166 014057 T 2 C 178 014426 T 4 C 176 014435 T 1 C 179 014436 A 8 G 172 014489 G 1 A 179 014904 T 1 C 175 014955 A 3 G 173 015003 A 1 G 175 015052 T 2 A 174 015246 T 1 A 177 015300 G 1 A 177 015321 G 2 C 176 015502 T 1 A 171 015525 C 1 T 171 015582 A 20 G 156 015628 G 8 T 168 015730 G 30 T 134 015956 C 5 T 161 016168 C 2 T 156 016375 G 1 A 147 016517 A 1 G 159 016578 A 1 G 161 016657 T 1 C 163 016761 G 18 T 150 016892 T 1 C 165 016897 A 22 G 142 017002 T 3 C 161 021914 G 13 C 157 022034 T 2 C 168 022168 A 1 G 173 022216 G 16 A 158 022272 G 1 A 173 022846 T 3 C 161 022849 T 1 G 163 023147 - 14 + 152 023197 C 25 G 141 023256 A 1 G 165 023331 A 24 T 140 023409 A 14 G 154 023464 A 1 G 161 023591 A 1 G 161 023645 T 2 A 162 023848 G 28 A 150 023871 G 28 A 150 023926 T 26 C 152 023937 A 85 G 93 023990 G 1 C 177 024032 T 1 C 177 024135 A 1 C 177 024138* 024211 T 3 C 175 024280 T 1 C 177 024474 C 10 A 166 024549 T 26 A 150 024676 A 26 G 150 024735 G 25 A 151 024771 C 25 G 151 024894 A 25 G 151 024910 C 3 T 173 025000 C 1 T 175 025094 A 3 C 175 025343 A 25 G 127 025575 G 1 A 153 025794 C 9 T 151 025800 G 1 T 159 025885 T 7 C 153 026097 A 15 T 147 026224 A 16 G 122 026247 C 3 A 145 026379 G 1 A 155 026406 T 2 C 154 026452 A 1 G 155 026512 + 1 - 153 026567 - 1 + 153 026690 G 26 T 138 026733 G 40 T 122 026968 T 1 C 163 026986 T 1 C 163 027498 T 2 C 172 027817 T 22 C 148 027852 A 3 G 169 027880 G 23 T 149 027987 A 4 G 170 027999 A 1 G 167 028142 - 1 + 143 028223 T 1 C 173 028276 C 18 T 156 028379 A 1 G 173 028940 C 1 T 161 029126 A 17 G 147 029584 G 1 A 157 029674 + 1 - 141 029709 T 1 G 111 030084 A 1 G 163 030114 T 1 G 163 030202 C 1 G 163 030286 C 15 A 145 030551 A 1 G 145 030554 C 1 T 143 030674 C 1 G 143 030730 G 1 C 143 031209 A 1 G 147 031213 G 1 A 143 031241 G 1 A 147 031279 G 1 A 145 035606 G 1 A 165 035667 + 1 - 161 035794 A 2 G 160 035796 A 1 G 161 036769 T 1 C 167 036899 G 14 A 154 036928 T 1 C 169 037225 A 24 G 148 037353 T 18 C 158 037603 T 2 C 174 037616 A 21 G 155 037617 C 18 A 158 037658 A 1 G 175 037719 G 17 A 159 037721 A 1 G 175 041380 C 1 T 131 041518 G 13 A 117 041539 G 19 A 111 041583 T 2 G 138 042192 G 66 A 76 042219 T 59 C 85 042375 + 1 - 151 042395 A 16 C 134 042461 G 1 A 147 042480 C 1 T 147 042486 G 4 C 146 042668 T 1 C 165 042846 G 2 C 176 042930 T 15 C 55 042959 + 12 - 140 043189 T 1 C 131 043434 A 13 G 147 043506 G 9 A 151 043565 A 1 C 159 043572 T 3 C 163 043656 A 13 G 165 043772 A 1 G 179 044267 G 16 A 120 044642 A 2 G 144 044695 G 2 C 148 044783 T 1 C 151 044882 G 64 A 86 045157 T 6 C 142 Note: pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000779: GTATTAGGGCTGGCACT 001692: GCCGGGCAGGTGGAG 001815: TGCTGGAGTGGTCGGGTCGG 001847: AGC 002023: GCGAGGGC 023147: TG 026512: GCGACTGCGGAGGACGAGC 026567: gggactgcggagagtagc 028142: TCTT 029674: A 035667: C 042375: GTTT 042959: TGAA * Site 24138 was observed to have 3 alleles. The number of occurance for each allele is given below. Site Allele1 Total-pop Allele2 Total-pop Allele3 Total-pop 024138 C 4 A 22 T 152