Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 000192 GG 19 22 22 24 87 GT 7 0 0 0 7 TT 0 0 0 0 0 0.629 0.000 0.000 0.000 0.141 000269 CC 26 20 22 23 91 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 000505 AA 24 22 22 23 91 AG 2 0 0 0 2 GG 0 0 0 0 0 0.042 0.000 0.000 0.000 0.011 000603 CC 8 22 20 24 74 CT 13 0 2 0 15 TT 5 0 0 0 5 0.005 0.000 0.050 0.000 8.916 000713 AA 17 22 20 24 83 AG 8 0 0 0 8 GG 1 0 0 0 1 0.002 0.000 0.000 0.000 2.183 000813 AA 0 5 0 1 6 AG 5 8 3 9 25 GG 21 9 17 14 61 0.294 1.352 0.131 0.091 2.189 000860 -- 0 0 0 0 0 +- 0 0 4 2 6 ++ 26 22 17 22 87 0.000 0.000 0.233 0.045 0.103 000872 CC 0 0 0 0 0 CG 2 0 0 0 2 GG 24 22 21 24 91 0.042 0.000 0.000 0.000 0.011 001202 AA 0 0 0 0 0 AT 1 0 0 0 1 TT 23 22 21 24 90 0.011 0.000 0.000 0.000 0.003 001269 AA 2 2 0 1 5 AC 7 6 3 11 27 CC 13 9 18 12 52 0.505 0.382 0.124 0.618 0.346 001938 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 21 21 21 22 85 0.000 0.000 0.000 0.011 0.003 002015 CC 19 21 21 22 83 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 002280 GG 15 17 19 20 71 GT 1 0 1 0 2 TT 0 0 0 0 0 0.017 0.000 0.013 0.000 0.014 002369 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 19 17 20 20 76 0.000 0.000 0.000 0.012 0.003 017106 AA 0 0 0 0 0 AG 1 4 4 0 9 GG 26 17 18 24 85 0.010 0.233 0.220 0.000 0.238 017188 AA 20 22 22 24 88 AG 7 0 0 0 7 GG 0 0 0 0 0 0.599 0.000 0.000 0.000 0.139 017238 CC 27 22 22 23 94 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 017332 AA 26 22 22 24 94 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 017409 CC 0 1 0 0 1 CT 0 2 2 0 4 TT 27 18 20 24 89 0.000 4.203 0.050 0.000 9.113 017468 CC 10 5 0 1 16 CG 14 8 6 11 39 GG 3 8 16 12 39 0.337 1.037 0.548 0.618 1.295 017898 AA 25 22 22 21 90 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.012 0.003 017953 GG 25 19 21 22 87 GT 0 2 0 0 2 TT 0 0 0 0 0 0.000 0.053 0.000 0.000 0.011 018628 AA 3 8 16 12 39 AG 14 8 6 10 38 GG 10 4 0 1 15 0.337 0.556 0.548 0.374 1.187 018711 CC 26 20 21 23 90 CT 1 0 1 0 2 TT 0 0 0 0 0 0.010 0.000 0.012 0.000 0.011 018833 CC 27 19 22 24 92 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.013 0.000 0.000 0.003 018868 CC 27 20 22 23 92 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 019101 CC 0 0 0 0 0 CT 7 0 0 0 7 TT 18 22 20 21 81 0.663 0.000 0.000 0.000 0.151 019181 CC 1 9 15 10 35 CT 8 7 5 10 30 TT 15 5 0 2 22 0.003 1.995 0.408 0.050 7.550 019352 CC 1 8 16 10 35 CG 9 9 6 10 34 GG 15 5 0 1 21 0.060 0.609 0.548 0.583 4.585 019354 AA 4 5 0 1 10 AG 16 9 6 10 41 GG 5 8 16 10 39 1.989 0.609 0.548 0.583 0.025 019374 CC 1 8 16 10 35 CT 9 9 6 10 34 TT 15 5 0 1 21 0.060 0.609 0.548 0.583 4.585 019383 CC 15 5 0 1 21 CT 7 9 6 10 32 TT 1 8 16 10 35 0.025 0.609 0.548 0.583 5.670 019413 CC 1 8 15 10 34 CT 10 9 6 10 35 TT 15 5 1 1 22 0.181 0.609 0.153 0.583 4.291 019425 AA 15 5 1 1 22 AG 9 9 6 10 34 GG 1 8 15 10 34 0.060 0.609 0.153 0.583 4.793 019489 -- 1 7 16 11 35 +- 11 9 6 11 37 ++ 15 6 0 2 23 0.354 0.714 0.548 0.107 4.127 019601 CC 2 0 0 0 2 CT 6 0 0 0 6 TT 13 15 18 18 64 0.948 0.000 0.000 0.000 9.085 019630 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 20 15 18 18 71 0.012 0.000 0.000 0.000 0.004 019851 AA 1 8 16 11 36 AG 9 5 5 11 30 GG 15 5 0 2 22 0.060 3.306 0.383 0.107 7.945 020092 CC 1 6 9 11 27 CT 4 1 1 1 7 TT 15 5 0 1 21 0.930 8.310 0.028 5.049 30.313 020374 AA 18 21 22 24 85 AG 6 0 0 0 6 GG 1 0 0 0 1 0.287 0.000 0.000 0.000 4.289 020908 -- 23 21 22 24 90 +- 3 0 0 0 3 ++ 0 0 0 0 0 0.097 0.000 0.000 0.000 0.025 020956 AA 15 5 0 1 21 AG 10 8 6 11 35 GG 1 8 16 12 37 0.181 1.037 0.548 0.618 4.681 020971 AA 1 8 16 12 37 AG 10 8 6 11 35 GG 15 5 0 1 21 0.181 1.037 0.548 0.618 4.681 021000 CC 19 21 22 24 86 CG 7 0 0 0 7 GG 0 0 0 0 0 0.629 0.000 0.000 0.000 0.142 022473 AA 1 0 0 0 1 AG 5 0 0 0 5 GG 19 22 20 23 84 0.718 0.000 0.000 0.000 5.936 022522 CC 0 0 0 0 0 CG 8 0 0 0 8 GG 18 22 21 23 84 0.860 0.000 0.000 0.000 0.190 022785 AA 8 3 0 0 11 AT 9 5 4 11 29 TT 1 7 13 11 32 0.571 1.195 0.302 2.444 1.029 022977 AA 26 22 22 23 93 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 023092 CC 23 22 22 24 91 CT 3 0 0 0 3 TT 0 0 0 0 0 0.097 0.000 0.000 0.000 0.025 023165 CC 1 8 16 12 37 CT 9 9 6 11 35 TT 14 5 0 1 20 0.091 0.609 0.548 0.618 4.144 026122 GG 25 21 15 24 85 GT 0 0 7 0 7 TT 0 0 0 0 0 0.000 0.000 0.787 0.000 0.144 026180 -- 8 5 0 1 14 +- 16 8 6 10 40 ++ 2 8 16 13 39 2.340 1.037 0.548 0.296 0.493 026182 CC 0 0 0 0 0 CG 7 1 0 0 8 GG 18 20 22 24 84 0.663 0.012 0.000 0.000 0.190 026242 AA 0 0 1 1 2 AG 0 3 8 2 13 GG 26 18 13 21 78 0.000 0.124 0.027 4.959 2.333 026755 AA 1 0 0 0 1 AG 4 0 0 0 4 GG 22 21 22 24 89 1.688 0.000 0.000 0.000 9.113 027871 CC 1 0 0 0 1 CT 8 0 0 0 8 TT 18 22 22 24 86 0.009 0.000 0.000 0.000 2.299 028186 AA 0 0 1 1 2 AG 3 3 8 2 16 GG 24 19 13 21 77 0.093 0.118 0.027 4.959 1.065 028350 GG 20 18 13 21 72 GT 3 3 7 2 15 TT 0 0 1 0 1 0.112 0.124 0.002 0.048 0.048 029242 AA 1 8 14 11 34 AG 10 8 6 10 34 GG 14 4 0 1 19 0.233 0.556 0.623 0.468 3.289 029347 CC 0 0 0 0 0 CG 0 1 0 0 1 GG 25 19 20 22 86 0.000 0.013 0.000 0.000 0.003 029447 AA 18 20 20 22 80 AG 6 0 0 0 6 GG 1 0 0 0 1 0.287 0.000 0.000 0.000 3.979 029512 AA 1 0 0 0 1 AG 8 0 0 0 8 GG 18 22 22 23 85 0.009 0.000 0.000 0.000 2.260 029531 AA 0 0 0 0 0 AC 2 0 0 0 2 CC 25 22 22 23 92 0.040 0.000 0.000 0.000 0.011 029742 GG 0 0 0 0 0 GT 2 0 0 0 2 TT 25 22 21 23 91 0.040 0.000 0.000 0.000 0.011 029883 AA 20 8 14 11 53 AG 5 9 6 9 29 GG 2 5 1 3 11 3.000 0.609 0.114 0.277 4.361 029926 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 26 22 20 23 91 0.000 0.000 0.012 0.000 0.003 029931 CC 25 22 21 23 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 030141 CC 25 21 19 22 87 CT 1 1 1 0 3 TT 0 0 0 0 0 0.010 0.012 0.013 0.000 0.026 030155 CC 26 22 19 22 89 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.013 0.000 0.003 030174 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 26 21 20 22 89 0.000 0.012 0.000 0.000 0.003 030508 CC 0 0 0 0 0 CT 0 3 3 0 6 TT 26 17 19 23 85 0.000 0.131 0.118 0.000 0.106 030511 CC 12 8 14 11 45 CT 10 8 7 10 35 TT 4 4 1 2 11 0.588 0.556 0.011 0.017 1.022 030594 AA 8 4 2 3 17 AC 15 9 6 9 39 CC 3 7 14 12 36 1.021 0.126 1.099 0.389 1.204 030601 CC 24 16 21 24 85 CT 1 3 1 0 5 TT 0 1 0 0 1 0.010 1.976 0.012 0.000 6.017 030688 CC 27 22 22 23 94 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 030843 CC 26 20 22 24 92 CT 0 2 0 0 2 TT 0 0 0 0 0 0.000 0.050 0.000 0.000 0.011 030908 -- 3 1 6 12 22 +- 7 10 9 9 35 ++ 15 11 7 3 36 1.854 0.468 0.714 0.389 4.914 032896 AA 17 19 12 21 69 AT 9 3 8 2 22 TT 1 0 1 1 3 0.020 0.118 0.053 4.959 0.554 032939 AA 0 0 0 0 0 AG 4 0 0 0 4 GG 23 22 21 24 90 0.173 0.000 0.000 0.000 0.044 033280 CC 0 0 0 0 0 CT 0 1 1 0 2 TT 23 17 20 22 82 0.000 0.015 0.012 0.000 0.012 033339 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 22 17 21 22 82 0.000 0.015 0.000 0.000 0.003 034171 CC 7 15 17 21 60 CT 6 0 0 0 6 TT 0 0 0 0 0 1.170 0.000 0.000 0.000 0.150 034272 CC 12 15 17 21 65 CT 1 0 0 0 1 TT 0 0 0 0 0 0.021 0.000 0.000 0.000 0.004 034416 CC 13 12 11 18 54 CT 0 3 6 2 11 TT 0 0 0 1 1 0.000 0.185 0.781 4.203 0.249 034723 CC 17 16 17 21 71 CT 2 0 0 0 2 TT 0 0 0 0 0 0.059 0.000 0.000 0.000 0.014 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000860: TT 019489: A 020908: a 026180: A 030908: ATC