Site Allele1 Total-pop Allele2 Total-pop 000374 G 1 A 167 000463 T 5 C 165 000519 C 2 T 166 000577 - 79 + 95 000605 T 1 C 167 000709 G 2 A 166 000973 G 10 C 168 000996 T 66 C 112 001010 C 1 A 177 001040 G 5 A 173 001326 A 1 G 173 001355 T 81 C 89 001710 T 2 C 170 001747 A 5 C 173 001800 G 6 A 172 001969 G 3 A 163 002168 A 1 G 169 002515 A 5 G 163 002518 A 3 G 165 002577 + 1 - 171 002587 A 5 G 169 002683 - 1 + 175 002829 T 4 A 146 002944 T 5 G 159 003306 - 5 + 163 003350 T 1 C 153 003392 G 5 C 175 003470 G 5 A 173 003873 C 5 T 167 008195 G 1 A 173 008227 A 1 G 177 008239 G 50 A 130 008722 T 5 G 175 008826 A 1 G 177 008837 G 46 A 126 008885 A 2 G 162 008923 A 5 G 159 009242 G 1 A 171 009261 - 11 + 161 009297 T 6 C 166 009546 A 1 C 173 009588 T 13 C 157 009736 A 1 T 125 009794 A 11 T 135 010032 C 4 G 148 010182 T 12 C 146 010268 C 1 A 157 010571 G 1 C 167 010601 G 6 A 162 011486 A 1 G 175 011491 C 16 T 162 011649 T 11 C 167 011694 A 1 C 177 012219 C 6 T 170 012221 C 3 T 173 012279 A 5 G 171 012327 C 5 T 171 012665 G 1 A 177 012797 C 1 T 177 012803 A 1 G 177 013320 - 1 + 177 013321 C 6 G 170 013483 A 9 G 167 013489 - 4 + 174 013529 T 5 C 173 013690 A 1 G 175 013961 A 1 G 175 014182 T 13 G 157 014424 T 10 C 160 014734 C 8 A 162 014794 G 17 A 153 014815 C 8 T 162 014878 T 13 G 159 023048 A 1 C 177 023075 C 1 T 177 023132 T 2 A 176 023140 T 66 C 112 023457* 023640 C 1 A 173 023825 C 2 T 170 024020 C 1 T 167 024215 A 1 T 169 024278 A 6 G 168 024789 C 3 T 119 027252 T 1 C 179 027667 C 1 A 177 027724 G 2 T 174 029398 C 1 T 153 029426 G 6 A 152 030227 + 2 - 144 030345 C 2 T 136 030410 T 2 G 134 030431 T 2 C 132 031140 T 7 C 81 031578 T 2 C 110 033714 G 1 A 153 033867 G 6 T 148 033934 T 1 G 153 034001 A 1 G 153 034018 A 1 G 153 034086 A 3 T 139 034603 G 10 C 168 034669 A 1 G 175 034761 C 1 G 175 034835 A 4 G 172 035857 T 3 G 173 039581 C 3 A 127 039621 C 10 T 166 039784 A 1 C 175 039881 C 9 A 165 040212 A 7 T 173 040364 C 1 T 175 040571 T 7 C 161 040888 G 5 C 165 041232 C 7 T 169 041335 G 3 C 173 041418 C 1 G 175 041425 T 1 G 175 041454 - 1 + 175 041469 T 2 G 172 041488 T 1 G 173 041753 T 1 G 179 043912 G 2 C 176 044194 T 1 C 177 044663 T 1 C 167 044945 T 1 A 175 Note: pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000577: C 002577: A 002683: GGGGGGAGGGA 003306: A 009261: GAAAGA 013320: c 013489: taag 030227: TA 041454: ag *Site 23457 was observed to have three alleles. The frequency for each allele is given below: Site Allele1 Total-pop Allele2 Total-pop Allele3 Total-pop 23457 T 1 A 6 C 169