Site      Genotype1 AD-pop    ED-pop    HD-pop    XD-pop    Total-pop Genotype2 AD-pop    ED-pop    HD-pop    XD-pop    Total-pop Genotype3 AD-pop    ED-pop    HD-pop    XD-pop    Total-pop AD-chi2   ED-chi2   HD-chi2   XD-chi2   Total-chi2
001041    CC        26        22        22        23        93        CG        0         0         0         1         1         GG        0         0         0         0         0         0.000     0.000     0.000     0.011     0.003     
001081    AA        19        22        19        24        84        AG        6         0         3         0         9         GG        1         0         0         0         1         0.336     0.000     0.118     0.000     1.612     
001090    CC        1         0         0         0         1         CT        6         0         3         0         9         TT        19        22        19        24        84        0.336     0.000     0.118     0.000     1.612     
001301    AA        0         0         0         0         0         AG        0         1         0         0         1         GG        26        21        22        24        93        0.000     0.012     0.000     0.000     0.003     
001710    CC        19        20        20        21        80        CT        2         2         2         0         6         TT        0         0         0         0         0         0.053     0.050     0.050     0.000     0.112     
002041    GG        8         0         0         1         9         GT        15        2         7         2         26        TT        4         20        15        20        59        0.500     0.050     0.787     4.707     4.909     
002337    CC        27        21        21        22        91        CT        0         1         1         0         2         TT        0         0         0         0         0         0.000     0.012     0.012     0.000     0.011     
002511    AA        1         0         0         0         1         AG        6         0         3         0         9         GG        20        22        19        22        83        0.386     0.000     0.118     0.000     1.581     
002728    AA        0         0         0         0         0         AG        0         0         0         1         1         GG        27        22        22        23        94        0.000     0.000     0.000     0.011     0.003     
003012    AA        1         0         0         0         1         AG        6         0         3         0         9         GG        20        22        19        24        85        0.386     0.000     0.118     0.000     1.644     
003097    CC        26        14        12        7         59        CT        1         7         10        9         27        TT        0         1         0         8         9         0.010     0.011     1.903     1.484     4.342     
003152    AA        4         20        15        21        60        AG        15        2         7         2         26        GG        8         0         0         1         9         0.500     0.050     0.787     4.959     5.070     
003184    --        0         0         0         0         0         +-        0         1         0         0         1         ++        19        20        22        24        85        0.000     0.012     0.000     0.000     0.003     
003458    AA        1         0         0         0         1         AC        6         0         3         0         9         CC        20        22        19        24        85        0.386     0.000     0.118     0.000     1.644     
003712    GG        0         0         0         0         0         GT        0         1         0         0         1         TT        27        21        22        24        94        0.000     0.012     0.000     0.000     0.003     
003994    CC        24        22        22        23        91        CG        0         0         0         1         1         GG        0         0         0         0         0         0.000     0.000     0.000     0.011     0.003     
004206    AA        0         0         0         0         0         AG        1         0         0         0         1         GG        23        20        21        22        86        0.011     0.000     0.000     0.000     0.003     
004531    CC        12        11        12        8         43        CT        1         3         2         5         11        TT        0         0         1         0         1         0.021     0.202     2.685     0.737     0.090     
006346    AA        0         0         0         0         0         AG        2         0         0         0         2         GG        17        16        22        13        68        0.059     0.000     0.000     0.000     0.015     
007105    GG        21        17        16        18        72        GT        3         0         0         0         3         TT        0         0         0         0         0         0.107     0.000     0.000     0.000     0.031     
007182    --        0         1         2         0         3         +-        1         5         6         4         16        ++        24        16        14        18        72        0.010     0.499     1.099     0.220     2.715     
007648    AA        16        17        16        18        67        AG        7         0         0         0         7         GG        0         0         0         0         0         0.741     0.000     0.000     0.000     0.182     
007667    AA        0         0         0         0         0         AG        2         0         3         0         5         GG        21        17        13        18        69        0.048     0.000     0.171     0.000     0.090     

Note:

AD: African_Descent
ED: European_Descent
HD: Hispanic_Descent
XD: Asian_Descent
Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

003184: t
007182: AGTTA