PRDX2 Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

ATTTAATATT TCCACGAGTC TCAGGTGGGG AAACCAAGAC CCAGAGACAG 50 | REPEAT CAAGCCAACC TTCCAAGCTC ATATACGGGG TAAGTGGGCC AGAGGAACTA 100 CAACCTGACA CTTCCAGGCT GTGCCAGCCT GCCCAGTTGT GAGTGTCCTA 150 CAACATCCTT GGTGCCCGCC ATTTGAAGCT GACTTCTGTC TTCAGGGGTG 200 TGACCATGGC CCTACCTAGA AGGCACAATG CCACCTGACA GCAGGGTTGT 250 CAAGTGATAA ATGGCATAAT TGACATAATG AAGGTAAGTA AATCTCCCGG 300 TGCTGTGCTA GCATATACAA ACCAATTTAT TATGATCAGT TTGTTTATTT 350 | REPEAT ATTTAATTTA TTTATTTTGA GACAAGATCT TGCTCTGTTA CCCAGGTTGG 400 AATGCAAGGG CATAATCATG GCTCACTGCA GCTTCAAACT CCTTGGCACA 450 AATGGTCCTC CTGTATCAGC CTCTTGAGTA GCTGGGACTA CAGGCGCATG 500 CCACCATGGC AGGCTAATTT ATTTTTTATT TTTATTTATT TATTTATTTT 550 | REPEAT TGTAGAGTAG GGGGTCTCTC CATGTTGCCC AGGCTGGTCT TGAATTCCTG 600 GGCTCAAGCA GTCCTCCCGC CTCGGCCTCC CAAAGTGCTG GGCCATCAAG 650 | REPEAT TCAGGCTAAT TTTAAAATAT TTTTTGTAGA GATGGAGTCT TGCTGTGTGG 700 GCCAGGCTGG TCTGGTCTCC GAGACCAAGG GATCCTCCCA CCTCAGCCTC 750 CCAAAGTGCT AGGATTATAG GCGTGAGCTA CCGCGCCGGC CACTGTGATC 800 ACTTTAAAGG GCTCTTTACT GAATCTGCCC CTTTCCCCTA TGAGACAGAT 850 CTTATCCCAA CTCCGATCTT ATCCCAACTC ACCGCTCACC AAGGTCTGAC 900 ACCTCCTACC CTCCCACACC CATGTCTCTG CCACACCTCA CCGACCTCTT 950 TCCATTTCTC CTTCAGGACT TTTCACCTTG GCATTTGCTA TTCCCTCTTC 1000 CTTGGACATT CTTTCCCCAA ATCTTTCCAT ATGGGACTTT CGCTTGTCGT 1050 | var(1041):[G:0.01] TCTCGCTGCA CTGGTCACGG GTCTTCTGCA ATCGGACCCT CTCTGATTTC 1100 | var(1081):[G:0.06] | var(1090):[C:0.06] CCAAGCTTGC CCGCCCCCTT CTTTCTCTGT CTCTGCCCTT CCTGGCACCT 1150 ATCCCCGAGT GACAGCTTCA GTGTCCTGCC CACACCCTCT CTTCCCCTGG 1200 | REPEAT GAGCTGCTTT AAAGCAGTAT CTATTTCAAT ATATCCAAGA GTAAACCGAG 1250 CCTTAGAGAA AAGTAACCAG CCCAAGGGGA CGCCTCCAGT GCGGAGCTGG 1300 GTGGAGATTT GCAGCCCGCC GAGGAAGGTC CCTTTGCAGC CAGCAGGAGA 1350 | var(1301):[A:0.01] AGTAGGGCAA CGGGGAGCCT TTGGGCATCG TCATCCCCGC CGCCTGAGGT 1400 TACCCTTTAG ATGCTGCAGC CTCAGCTGCT CCCAGCTGTC ACCTTCGCCC 1450 TGCTGCCCTA AGTACTGATA GTCCTGGTAG ACCAGGGCAG GGGTCGCCAG 1500 CTGCAGGAGT AGCAGAGGCG CCAGCAGCAG CGCCCCCGGG GTCCGCGCCA 1550 TGCTGGACTC CAACGGCCCC CAACGCGCTC CCAGGCGGAG TCGTGCGCGG 1600 AGTCTGCGGC GGGCGCATTA CCCACGCGGG CAGGTGCAGT GGTCCCGGCC 1650 GAAGGCAACG CGTCTCCCCC CGCCGCCCGC AGGCGCATGG ACCCGGCCGC 1700 ACGCTCCCCC GCACCTGCGG GCGCAGTGGA CCCGACCGCT CCGCTCGTCC 1750 | var(1710):[T:0.03] | Exon 1 | UTR GCTCCCTCCC CCGCGCCGTG CACGTCTTGG TTCGGGCCGG GCATAAAAGG 1800 CTTCGCGGCC CAGGGCTCAC TTGGCGCTGA GAACGCGGGT CCACGCGTGT 1850 GATCGTCCGT GCGTCTAGCC TTTGCCCACG CAGGTATGAA CACCCGGAGT 1900 GCACCTGGCG GGAGGACCCC CTTCAGGCTG CTTTGGCCCG ATCCTGACTT 1950 TAGTGCTGGC CGCCTTTGCT TTCCATCCGC TATAGTGGCC TCCTTTGTCC 2000 TTGCGGGGGA AACCGAGGCC ACAGCCTTGC AGCGCAGGCC TGATCGCCCG 2050 | var(2041):[G:0.23] ACTTCCCGCC CCCTGCTCGT GCGGGCCTCA CTGTCTCCTT CTGGGCTGGG 2100 GGCTTGCGAC ACCGCCCTCC GGCCGACTCG CTCGTGGGGT GCTGGTGGCA 2150 GTGGCTGGGT CACTCGTGCT CTGGTCAGGA GAGCGGGTCT CCGGCAGCCT 2200 CCGGGCCTCG TAGACCGGGT ACCCGGGAGG GTGAGGGTTA GTGCTGTCGC 2250 CTCCGCCGTG CTGACTCAGT CATAGGGCCC AGCACGCAGC GCGACCTTGG 2300 GTTGGGAGGA CAAAGTGTCT TCCCGGGCGC ACTGACCGGG CGGGGGTCTC 2350 | var(2337):[T:0.01] AGCTTTCAGT CATGGCCTCC GGTAACGCGC GCATCGGAAA GCCAGCCCCT 2400 | Exon 2 | UTR M A S G N A R I G K P A P 13 GACTTCAAGG CCACAGCGGT GGTTGATGGC GCCTTCAAAG AGGTGAAGCT 2450 D F K A T A V V D G A F K E V K L 30 GTCGGACTAC AAAGGTGAGC GCCGCCCGGA GGGGGCCCAG GTAGAAGCGG 2500 S D Y K 34 GGCCGTGCAT GAGAGAAGCT GGGCCCTAAC TCCTCTGTGT CCCTCCTCCC 2550 | var(2511):[A:0.06] CAGGGAAGTA CGTGGTCCTC TTTTTCTACC CTCTGGACTT CACTTTTGTG 2600 | Exon 3 G K Y V V L F F Y P L D F T F V 50 TGCCCCACCG AGATCATCGC GTTCAGCAAC CGTGCAGAGG ACTTCCGCAA 2650 C P T E I I A F S N R A E D F R K 67 GCTGGGCTGT GAAGTGCTGG GCGTCTCGGT GGACTCTCAG TTCACCCACC 2700 L G C E V L G V S V D S Q F T H 83 TGGCTTGGTA TGAGCAGGGG CCAAAGAGGG AGGTTGCAGC TAAGCTCACA 2750 | REPEAT | var(2728):[A:0.01] L A W 86 CCCTCAGGTC CTAGCAGTGT GGCTTCGTGG CCATTGCTCA ACCTCTGGAA 2800 CCTGCGTTTC CCCATCGTGA AAATAATGGA AACATTGCCG CCCAAGTCTT 2850 TAAGGATGAT GACAGTAATT AGCATTTGAC AACTAGTTGC CTGGTATATA 2900 GAGTTGCAGA TGCAACTCAG ATGCAACTCT ATCTACTCTA TGTACTTAGT 2950 TCCCAGGAGG GAGGCTGTGC TGCCCTATTT CATGAAGATG GAAACTCCAG 3000 TTCACCGAAG TGAAGGGCTG TACCCCATGA CACAGCTAGA GGAGGATGGG 3050 | var(3012):[A:0.06] GACTCTTAAC ACAGGCTCTC TGCTGGGTGA TGCTGCAAGT TACAAGCACA 3100 | var(3097):[T:0.24] TGTGAAGCCA CTTAGCTGGA GCTGTGCCTC TCAAACTCAG TCTTCCCAGC 3150 CATGGGGATA CAGTCCTTGC ACCCAACCCA GGGTGGGGTG GGTGAGGCTC 3200 | var(3152):[G:0.23] | var(3184):[:0.01] CCAGCGGCCT ACTCTAAAGC CCCTTATCTC CGGCCTCCAG TGCTTATCAC 3250 ATTGGGCCCA CAGGGTGAGG ACCCTGCTGT GCCAGGCATC CTGAGGCCCC 3300 AACTCTGTCT CCCCTACTCC CAGGATCAAC ACCCCCCGGA AAGAGGGAGG 3350 | Exon 4 I N T P R K E G G 95 CTTGGGCCCC CTGAACATCC CCCTGCTTGC TGACGTGACC AGACGCTTGT 3400 L G P L N I P L L A D V T R R L 111 CTGAGGATTA CGGCGTGCTG AAAACAGATG AGGGCATTGC CTACAGGTAC 3450 S E D Y G V L K T D E G I A Y R 127 TGTGGGACCC TCAGCCCGGC TCAGGGAGCG CCCTGCCCCC CATTCCTGTG 3500 | var(3458):[A:0.06] ATGCTGGGAC CACTCCTGTA CAATGTCTTC TCTGCCCCCA GCCCTGTGGC 3550 TAGCAGCGGG TGGTTGGTAG TCCCTTCCTT GTCTCTGGCA GTGGGAGCTA 3600 TCAGCTCCTC ACTGGGAACC CTGATGTCTT CAGGGGCCTC TTTATCATCG 3650 | Exon 5 G L F I I 132 ATGGCAAGGG TGTCCTTCGC CAGATCACTG TTAATGATTT GCCTGTGGGA 3700 D G K G V L R Q I T V N D L P V G 149 CGCTCCGTGG ATGAGGCTCT GCGGCTGGTC CAGGCCTTCC AGTACACAGA 3750 | var(3712):[G:0.01] R S V D E A L R L V Q A F Q Y T D 166 CGAGCATGGG GAAGGTGAGC AGATACACAC ATGACACATG GGTACATACT 3800 E H G E 170 GAGCGCCTCC GTCACTCATG CAAACATTCA CTGCCTGTCC TCTTACCTGT 3850 CCAGATGGGT GTTAGGGCCC CAAAGAAGAT TCAGCTCAGG GCTTTGTCTG 3900 CAGGATGTTT CTAATGTGGT AGGAGACAAA TAACGCCTGA CATTCAACCA 3950 AGGTGGACAA AGGGGCCGGG CTCAGTGGCT CACGGTTGTA TTGCCAGCAC 4000 | REPEAT | var(3994):[G:0.01] TTTGGGAAGC TGTGGCAGGT GGATCACCTG AGGTCAGGAG TTCGAGACCA 4050 GCCTGACCAA CATGGTGAAA CCCCGTCTCT ACGAAGAACA CAAAAAATTA 4100 GCTGGCCGTG GTGGTGCACA CTTGTAATCC CAGCTACTTG AGAGACTGAG 4150 GCAGGAGTTC GCTTGAACCC AGGAGGCAGA GGTTGCAGTG AGCTGAGATC 4200 GCACCGTTGT ACTCCAGCTT GGGCAACAGA GCAAAACTCA GTCTCAAAAA 4250 | var(4206):[A:0.01] AAAAAAAAAT TAGCTTGGTT TGTGAAGCAT GCCTATAGTC CCAGCTACTC 4300 | REPEAT AAGAGGCTGA GGCTGGAGGA TCACTTGAGC CTGGGAGGTC AAGGCTGCAG 4350 TAAGCTGTGA TCGCACCACT GCACTCCAGC CTGGGTGACA CAGCAAGACC 4400 CTGTCTCAAA AAAACAAACA AACAGGCCGA GCGCGGTGGC TCACGCCTGT 4450 | REPEAT AATCCCAGCA CTTTGGGAGG CCGAGGCGGG CAGATCATGA GGTCAGGAGT 4500 TTGAGACCAG CCTGGCCAAC ATAGTGAAAC CGCGTCTCTG CTAAAAATAC 4550 | var(4531):[T:0.12] AAAAAAATTA GCTGGGTGCG GTGGCAGGTG CCTGTAATCC CAGCTACTTG 4600 GGAGGCTGAG GCAGGAGACT CCCTTGAACC CGGGAGGAGG TTGCAGTAAG 4650 CCGAGATCAC ACCACTGCAC TCCAGCCTGG GCGCCAGTGT GAGACTCCAT 4700 CTCAAAAACA ACAACAACAA AAAAACCTGT AGGGGTGGGG CAGAGGGACA 4750 | NOT SCANNED AAGATGGGAC TAAAGGAGCC AAAAAGACAG GAAGATGCTG TGTCTCATGC 4800 CTGTAGATGC TGTGTCTCAT GCCTGTAGTT CCACCTACTC TGGAGAGTGA 4850 | REPEAT GGCAGAAGAT TGCTTAGGCC CAGGAATTTG AGTCGAGCCT AGGCAACATA 4900 GCAATACCCC ATCTCTTTTT TTTTTTTTTT AAGAGATGGG GTATTGGTTA 4950 AAAAAAAAAA AAAAAAAAAA GAGGCCAGAT GCAGTGGCTC ACACCTGTAA 5000 | REPEAT TCCCAGCATT TTGGGAGGCC TAGGTGGGTG GATCACCTGA GGTCGGGAGT 5050 TCGAGACAAG CTTGACCGAC ATGGAGAAAC CCAGTCTCTA CTAAAAATAC 5100 AAAATTAGCC CAGCCTGGTG GTGCATGCCT GTAATCCCAG CTACTTGGGA 5150 GGCTGAGGCA AGAGAATCGT TTGAAGCTGA GAGGCGGAGG T