Site      Allele1   Total-pop Allele2   Total-pop 
000262    A         44        G         120       
000839    T         7         A         157       
000983    A         2         G         174       
001254    G         2         T         172       
001265    A         42        G         132       
001272    G         43        C         131       
001689    G         1         C         173       
002256    A         1         G         173       
002340    G         2         A         172       
002599    G         1         C         179       
002672    T         5         A         175       
003046    T         2         C         172       
003190    T         4         C         170       
003321    C         1         G         179       
003332    C         5         T         175       
003659    G         2         A         162       
003668    A         13        G         159       
003696    T         5         C         161       
003746    A         9         G         169       
003747    C         7         T         171       
003790    G         2         T         178       
003951    G         2         A         176       
004256    +         64        -         114       
004410    G         3         C         175       
004551    G         3         A         163       
004618    G         37        A         141       
004646    T         2         C         176       
004918    G         1         A         179       
005172    T         1         C         153       
005201    C         12        G         144       
005338    G         7         A         151       
005842    G         2         C         152       
005847    C         4         T         150       
005907    A         5         G         165       
005908    A         1         G         169       
006058    G         1         C         171       
006146    T         1         C         171       
006326    T         1         C         159       
006420    A         3         G         147       
006541    G         5         A         165       
006726    G         1         T         179       
006786    C         5         T         175       
006800    C         42        T         138       
006944    A         1         T         177       
007272    G         5         A         173       
007729    G         5         A         175       
007771    T         41        G         137       
007784    T         3         C         175       
007879    T         1         C         173       
008526    -         12        +         160       
008620    A         5         T         169       
008627    A         5         G         169       
008653    A         29        G         147       
008887    A         2         T         166       
008892    +         1         -         169       
009280    T         3         C         161       
009405    G         2         A         178       
009841    T         5         C         173       
009956    A         2         G         174       
009990    T         4         G         172       
010194    T         9         C         171       
010523    A         68        G         112       
010838    +         46        -         130       
010868    A         64        G         104       
010880    C         14        G         154       
011205    T         1         A         157       
011281    +         1         -         159       
011521    -         1         +         169       
011738    -         3         +         163       
012637    C         1         T         167       
012711    T         4         C         156       
012849    A         16        G         134       
013100    A         4         G         156       
013159    T         1         C         159       
013171    T         1         C         161       
013226    A         1         T         165       
013465    C         4         T         174       
013492    T         42        G         134       
013794    A         43        C         119       
013985    A         4         G         170       
014082    A         1         C         169       
014297    G         1         A         169       
014520    G         1         A         175       
014765    -         1         +         175       
014968    G         42        A         136       
015144    T         1         C         177       
015250    C         4         A         176       
015704    A         2         C         142       
015728    +         1         -         147       
015975    G         24        T         134       
016152    T         1         C         179       
016523    C         5         T         175       
016638    C         69        G         107       
016711    T         3         C         173       
016962    -         4         +         172       
017125    G         1         A         179       
017129    +         1         -         175       
017267    C         4         G         176       
017268    C         5         T         175       

Note:

Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

004256: A
008526: A
008892: A
010838: TTTTTGCACAAGATGTT
011281: A
011521: CT
011738: T
014765: T
015728: AATT
016962: GAT
017129: C