Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000101 00000 ------------ T 1.000 1.000 1.000 1.000 0.979 0.995 A 0.000 0.000 0.000 0.000 0.021 0.005 0000 --- --- --- --- 000165 00000 ------------ A 1.000 1.000 0.932 0.932 1.000 0.968 T 0.000 0.000 0.068 0.068 0.000 0.032 0000 --- --- --- --- 000319 00000 ------------ G 0.800 0.917 0.818 0.932 0.583 0.795 C 0.200 0.083 0.182 0.068 0.417 0.205 0000 --- --- --- --- 000368 00000 ------------ C 0.967 1.000 1.000 1.000 1.000 0.995 A 0.033 0.000 0.000 0.000 0.000 0.005 0000 --- --- --- --- 000664 00000 ------------ C 1.000 0.958 1.000 1.000 1.000 0.995 T 0.000 0.042 0.000 0.000 0.000 0.005 0000 --- --- --- --- 000890 00000 ------------ C 0.933 0.875 0.568 0.614 0.958 0.774 T 0.067 0.125 0.432 0.386 0.042 0.226 0000 --- --- --- --- 001162 00000 ------------ C 0.700 0.625 0.841 0.545 0.478 0.633 T 0.300 0.375 0.159 0.455 0.522 0.367 0000 --- --- --- --- 001332 00000 ------------ G 0.893 0.958 1.000 1.000 1.000 0.978 C 0.107 0.042 0.000 0.000 0.000 0.022 0000 --- --- --- --- 001396 00000 ------------ C 1.000 1.000 1.000 0.977 1.000 0.995 T 0.000 0.000 0.000 0.023 0.000 0.005 0000 --- --- --- --- 001656 00000 ------------ G 0.967 1.000 1.000 1.000 1.000 0.995 A 0.033 0.000 0.000 0.000 0.000 0.005 0000 --- --- --- --- 002022 00052 5' UTR G 0.667 0.625 0.650 0.523 0.458 0.570 T 0.333 0.375 0.350 0.477 0.542 0.430 0000 --- --- --- --- 002337 00367 5' UTR G 1.000 1.000 1.000 0.977 1.000 0.995 C 0.000 0.000 0.000 0.023 0.000 0.005 0000 --- --- --- --- 003668 01698 NON-SYN G 1.000 0.958 1.000 1.000 1.000 0.995 A 0.000 0.042 0.000 0.000 0.000 0.005 0348 GGA AGA GLY(G) ARG(R) 003728 01758 NON-SYN G 0.821 0.833 0.976 0.977 1.000 0.941 A 0.179 0.167 0.024 0.023 0.000 0.059 0368 GTA ATA VAL(V) ILE(I) 004894 02183 SYNON C 1.000 1.000 1.000 1.000 0.979 0.995 T 0.000 0.000 0.000 0.000 0.021 0.005 0509 GAC GAT ASP(D) ASP(D) 005280 00000 ------------ C 0.571 0.542 0.841 0.548 0.477 0.604 T 0.429 0.458 0.159 0.452 0.523 0.396 0000 --- --- --- --- 005282 00000 ------------ T 0.571 0.542 0.841 0.545 0.477 0.603 C 0.429 0.458 0.159 0.455 0.523 0.397 0000 --- --- --- --- 005442 00000 ------------ C 0.567 0.542 0.841 0.545 0.458 0.595 A 0.433 0.458 0.159 0.455 0.542 0.405 0000 --- --- --- --- 005510 00000 ------------ G 0.567 0.542 0.841 0.545 0.458 0.595 A 0.433 0.458 0.159 0.455 0.542 0.405 0000 --- --- --- --- 006123 00000 ------------ T 1.000 1.000 0.976 0.977 1.000 0.989 C 0.000 0.000 0.024 0.023 0.000 0.011 0000 --- --- --- --- 007160 00000 ------------ T 0.950 1.000 1.000 1.000 1.000 0.993 C 0.050 0.000 0.000 0.000 0.000 0.007 0000 --- --- --- --- 007404 00000 ------------ G 0.650 0.625 0.806 0.529 0.474 0.611 A 0.350 0.375 0.194 0.471 0.526 0.389 0000 --- --- --- --- 007582 00000 ------------ C 1.000 1.000 1.000 1.000 0.978 0.995 T 0.000 0.000 0.000 0.000 0.022 0.005 0000 --- --- --- --- 007773 02558 NON-SYN C 1.000 1.000 1.000 0.977 1.000 0.995 G 0.000 0.000 0.000 0.023 0.000 0.005 0634 AAC AAG ASN(N) LYS(K) 008104 02889 3' UTR A 0.967 1.000 1.000 1.000 1.000 0.995 C 0.033 0.000 0.000 0.000 0.000 0.005 0000 --- --- --- --- 008130 02915 3' UTR G 1.000 1.000 0.952 1.000 1.000 0.989 A 0.000 0.000 0.048 0.000 0.000 0.011 0000 --- --- --- --- 008227 03012 3' UTR C 1.000 1.000 0.977 0.977 1.000 0.989 T 0.000 0.000 0.023 0.023 0.000 0.011 0000 --- --- --- --- 008293 03078 3' UTR A 1.000 1.000 1.000 1.000 0.958 0.989 G 0.000 0.000 0.000 0.000 0.042 0.011 0000 --- --- --- --- 008447 03232 3' UTR C 1.000 1.000 0.841 0.976 1.000 0.957 G 0.000 0.000 0.159 0.024 0.000 0.043 0000 --- --- --- --- 008692 03477 3' UTR A 0.567 0.545 0.864 0.524 0.458 0.597 T 0.433 0.455 0.136 0.476 0.542 0.403 0000 --- --- --- --- 008858 00000 ------------ C 1.000 1.000 1.000 0.976 1.000 0.995 G 0.000 0.000 0.000 0.024 0.000 0.005 0000 --- --- --- --- 008897 00000 ------------ A 0.667 0.636 0.864 0.524 0.458 0.624 G 0.333 0.364 0.136 0.476 0.542 0.376 0000 --- --- --- --- 008970 00000 ------------ C 0.933 0.917 1.000 1.000 1.000 0.979 T 0.067 0.083 0.000 0.000 0.000 0.021 0000 --- --- --- --- 009096 00000 ------------ A 1.000 1.000 0.977 1.000 1.000 0.995 C 0.000 0.000 0.023 0.000 0.000 0.005 0000 --- --- --- --- 009500 00000 ------------ G 1.000 1.000 1.000 1.000 0.978 0.995 A 0.000 0.000 0.000 0.000 0.022 0.005 0000 --- --- --- --- 009568 00000 ------------ C 1.000 1.000 1.000 0.976 1.000 0.995 T 0.000 0.000 0.000 0.024 0.000 0.005 0000 --- --- --- --- 009721* 009746 00000 ------------ - 1.000 1.000 1.000 1.000 0.958 0.989 + 0.000 0.000 0.000 0.000 0.042 0.011 0000 --- --- --- --- 010400 00000 ------------ G 0.933 1.000 1.000 1.000 1.000 0.989 A 0.067 0.000 0.000 0.000 0.000 0.011 0000 --- --- --- --- 010408 00000 ------------ C 1.000 1.000 0.977 1.000 1.000 0.995 T 0.000 0.000 0.023 0.000 0.000 0.005 0000 --- --- --- --- 010439 00000 ------------ T 0.900 0.909 0.500 0.568 0.958 0.745 C 0.100 0.091 0.500 0.432 0.042 0.255 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 009746: G The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele3 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq 009721 C 0.833 0.833 0.977 0.977 0.979 0.937 G 0.167 0.167 0.023 0.023 0.000 0.058 T 0.000 0.000 0.000 0.000 0.021 0.005