Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000174 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 000499 00000 ------------ C 0.77 0.92 1.00 1.00 1.00 0.95 A 0.23 0.08 0.00 0.00 0.00 0.05 0000 --- --- --- --- 000528 00000 ------------ C 0.73 0.71 1.00 0.95 1.00 0.91 A 0.27 0.29 0.00 0.05 0.00 0.09 0000 --- --- --- --- 000827 00000 ------------ G 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000878 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 000900 00000 ------------ - 0.97 0.96 1.00 1.00 1.00 0.99 + 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001220 00000 ------------ G 0.93 1.00 1.00 1.00 1.00 0.99 A 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001401 00086 NON-SYN T 0.96 0.95 1.00 1.00 1.00 0.99 C 0.04 0.05 0.00 0.00 0.00 0.01 0011 GTA GCA VAL(V) ALA(A) 001762 00000 ------------ - 0.08 0.00 0.45 0.33 0.02 0.21 + 0.92 1.00 0.55 0.67 0.98 0.79 0000 --- --- --- --- 001809 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001848 00000 ------------ - 0.97 1.00 1.00 1.00 1.00 0.99 + 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001870 00000 ------------ - 1.00 0.91 1.00 1.00 1.00 0.99 + 0.00 0.09 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002050 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 002303 00000 ------------ A 0.75 0.94 0.43 0.41 0.40 0.52 G 0.25 0.06 0.57 0.59 0.60 0.48 0000 --- --- --- --- 003013 00000 ------------ C 0.89 0.81 1.00 1.00 1.00 0.96 G 0.11 0.19 0.00 0.00 0.00 0.04 0000 --- --- --- --- 003046 00000 ------------ C 0.62 0.50 0.57 0.78 0.77 0.67 T 0.38 0.50 0.42 0.23 0.23 0.33 0000 --- --- --- --- 015560 00000 ------------ A 1.00 0.92 1.00 1.00 1.00 0.99 G 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015761 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 015844 00000 ------------ A 0.80 0.71 1.00 0.95 1.00 0.92 G 0.20 0.29 0.00 0.05 0.00 0.08 0000 --- --- --- --- 015915 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 015998 00172 NON-SYN C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0040 CGG TGG ARG(R) TRP(W) 016123 00000 ------------ C 0.73 0.92 0.48 0.45 0.46 0.56 T 0.27 0.08 0.52 0.55 0.54 0.44 0000 --- --- --- --- 016131 00000 ------------ T 0.50 0.25 0.93 0.89 0.81 0.74 C 0.50 0.75 0.07 0.11 0.19 0.26 0000 --- --- --- --- 016384 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 016447 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 016454 00000 ------------ T 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 016635 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 016793 00000 ------------ T 0.87 0.75 1.00 0.98 1.00 0.94 C 0.13 0.25 0.00 0.02 0.00 0.06 0000 --- --- --- --- 017026 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 017440 00000 ------------ C 0.73 0.86 0.47 0.47 0.47 0.57 A 0.27 0.14 0.53 0.53 0.53 0.43 0000 --- --- --- --- 017543 00000 ------------ G 0.77 0.55 0.52 0.57 0.78 0.64 T 0.23 0.45 0.48 0.42 0.23 0.36 0000 --- --- --- --- 017585 00000 ------------ A 0.97 0.95 1.00 1.00 1.00 0.99 G 0.03 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 017885 00000 ------------ A 0.93 1.00 0.69 0.89 1.00 0.89 T 0.07 0.00 0.31 0.11 0.00 0.11 0000 --- --- --- --- 017928 00000 ------------ G 0.67 0.58 0.50 0.59 0.73 0.61 A 0.33 0.42 0.50 0.41 0.27 0.39 0000 --- --- --- --- 017966 00000 ------------ A 0.43 0.29 0.50 0.55 0.74 0.53 G 0.57 0.71 0.50 0.45 0.26 0.47 0000 --- --- --- --- 018039 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 018123 00000 ------------ C 0.97 1.00 0.98 1.00 0.93 0.97 G 0.03 0.00 0.02 0.00 0.07 0.03 0000 --- --- --- --- 018128 00000 ------------ G 1.00 0.96 1.00 1.00 0.81 0.95 A 0.00 0.04 0.00 0.00 0.19 0.05 0000 --- --- --- --- 018136 00000 ------------ T 0.97 0.96 1.00 1.00 1.00 0.99 C 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 018855 00000 ------------ T 0.97 0.95 1.00 1.00 1.00 0.99 C 0.03 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 018934 00000 ------------ G 0.77 0.91 0.48 0.42 0.50 0.57 A 0.23 0.09 0.52 0.57 0.50 0.43 0000 --- --- --- --- 069436 00000 ------------ G 0.92 0.80 1.00 1.00 1.00 0.96 A 0.08 0.20 0.00 0.00 0.00 0.04 0000 --- --- --- --- 069637 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 069673 00000 ------------ G 1.00 1.00 0.95 1.00 1.00 0.99 A 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 070115 00000 ------------ - 0.67 0.72 0.95 1.00 0.85 0.85 + 0.33 0.28 0.05 0.00 0.15 0.15 0000 --- --- --- --- 070192 00000 ------------ A 0.64 0.77 0.50 0.82 0.77 0.70 T 0.36 0.23 0.50 0.18 0.23 0.30 0000 --- --- --- --- 070310 00000 ------------ G 0.85 0.60 0.58 0.32 0.47 0.54 A 0.15 0.40 0.42 0.68 0.53 0.46 0000 --- --- --- --- 070461 00000 ------------ G 0.69 0.75 0.95 1.00 0.88 0.88 A 0.31 0.25 0.05 0.00 0.12 0.12 0000 --- --- --- --- 070688 00337 NON-SYN G 0.93 1.00 0.52 0.81 0.93 0.81 A 0.07 0.00 0.48 0.19 0.07 0.19 0095 GTC ATC VAL(V) ILE(I) 070770 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 070802 00000 ------------ T 1.00 0.92 1.00 0.93 0.74 0.91 C 0.00 0.08 0.00 0.07 0.26 0.09 0000 --- --- --- --- 070889 00000 ------------ G 0.97 0.96 1.00 0.98 1.00 0.98 A 0.03 0.04 0.00 0.02 0.00 0.02 0000 --- --- --- --- 071040 00000 ------------ G 0.70 0.83 1.00 1.00 1.00 0.93 A 0.30 0.17 0.00 0.00 0.00 0.07 0000 --- --- --- --- 071250 00000 ------------ G 0.70 0.88 1.00 1.00 1.00 0.93 A 0.30 0.12 0.00 0.00 0.00 0.07 0000 --- --- --- --- 071317 00000 ------------ G 0.80 0.62 0.57 0.29 0.43 0.52 A 0.20 0.38 0.43 0.71 0.57 0.48 0000 --- --- --- --- 071439 00000 ------------ T 0.93 0.96 0.95 1.00 1.00 0.97 A 0.07 0.04 0.05 0.00 0.00 0.03 0000 --- --- --- --- 071440 00000 ------------ A 0.97 1.00 1.00 0.90 1.00 0.97 T 0.03 0.00 0.00 0.10 0.00 0.03 0000 --- --- --- --- 071554 00000 ------------ C 1.00 1.00 1.00 1.00 0.97 0.99 T 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 071617 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 071715 00000 ------------ C 0.93 0.88 1.00 1.00 1.00 0.97 T 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 071744 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 071759 00000 ------------ A 0.90 0.86 1.00 0.98 1.00 0.96 G 0.10 0.14 0.00 0.02 0.00 0.04 0000 --- --- --- --- 071820 00000 ------------ C 0.70 0.82 0.52 0.68 0.90 0.72 G 0.30 0.18 0.48 0.32 0.10 0.28 0000 --- --- --- --- 071844 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 071920 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 071986 00000 ------------ T 0.97 1.00 0.93 0.43 0.50 0.72 C 0.03 0.00 0.07 0.57 0.50 0.28 0000 --- --- --- --- 072016 00000 ------------ G 0.73 0.91 1.00 0.98 1.00 0.94 A 0.27 0.09 0.00 0.02 0.00 0.06 0000 --- --- --- --- 072152 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 072272 00000 ------------ G 1.00 1.00 0.95 1.00 1.00 0.99 A 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 072308 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 072411 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 072422 00000 ------------ A 1.00 1.00 0.95 1.00 1.00 0.99 T 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 072439 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 072567 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 072623 00000 ------------ A 0.97 1.00 0.95 1.00 1.00 0.98 T 0.03 0.00 0.05 0.00 0.00 0.02 0000 --- --- --- --- 072663 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 073036 00000 ------------ A 1.00 0.92 1.00 0.93 0.77 0.92 C 0.00 0.08 0.00 0.07 0.23 0.08 0000 --- --- --- --- 073174 00000 ------------ G 0.97 1.00 1.00 0.98 1.00 0.99 A 0.03 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 073187 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 073589 00000 ------------ G 1.00 1.00 1.00 0.97 1.00 0.99 A 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 073711 00000 ------------ T 0.68 0.73 1.00 0.66 0.79 0.78 C 0.32 0.27 0.00 0.34 0.21 0.22 0000 --- --- --- --- 073821 00000 ------------ C 0.95 0.91 0.97 1.00 0.95 0.96 T 0.05 0.09 0.03 0.00 0.05 0.04 0000 --- --- --- --- 073822 00000 ------------ G 1.00 1.00 0.94 1.00 0.98 0.98 T 0.00 0.00 0.06 0.00 0.02 0.02 0000 --- --- --- --- 073899 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 073923 00000 ------------ A 0.64 0.68 1.00 0.76 0.88 0.82 C 0.36 0.32 0.00 0.24 0.12 0.18 0000 --- --- --- --- 073965 00000 ------------ G 0.77 0.91 0.53 0.79 0.90 0.78 A 0.23 0.09 0.47 0.21 0.10 0.23 0000 --- --- --- --- 073966 00000 ------------ T 0.95 1.00 1.00 1.00 1.00 0.99 C 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 074521 00000 ------------ G 0.93 0.92 1.00 1.00 1.00 0.98 A 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 074868 00000 ------------ C 0.53 0.79 1.00 0.98 1.00 0.89 T 0.47 0.21 0.00 0.02 0.00 0.11 0000 --- --- --- --- 075132 00000 ------------ C 0.50 0.71 0.43 0.75 0.80 0.64 G 0.50 0.29 0.57 0.25 0.20 0.36 0000 --- --- --- --- 075206 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 075884 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 076030 00000 ------------ A 0.93 0.96 1.00 1.00 1.00 0.98 G 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 076085 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 076101 00000 ------------ C 0.81 0.65 0.53 0.47 0.52 0.58 A 0.19 0.35 0.47 0.53 0.48 0.42 0000 --- --- --- --- 076102 00000 ------------ G 1.00 0.95 1.00 1.00 1.00 0.99 A 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 076120 00000 ------------ C 0.96 1.00 0.71 0.86 0.93 0.88 T 0.04 0.00 0.29 0.14 0.07 0.12 0000 --- --- --- --- 076125 00000 ------------ G 0.81 0.91 1.00 1.00 1.00 0.96 T 0.19 0.09 0.00 0.00 0.00 0.04 0000 --- --- --- --- 076168 00000 ------------ G 0.81 0.68 0.53 0.39 0.50 0.56 A 0.19 0.32 0.47 0.61 0.50 0.44 0000 --- --- --- --- 076308 00000 ------------ G 1.00 1.00 0.97 1.00 1.00 0.99 A 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 076390 00000 ------------ G 0.93 0.96 1.00 1.00 1.00 0.98 T 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 076575 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 076616 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 076853 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 076965 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 076981 00000 ------------ G 0.57 0.46 0.57 0.48 0.52 0.52 C 0.43 0.54 0.43 0.52 0.48 0.48 0000 --- --- --- --- 077129 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 077351 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 077584 00000 ------------ G 1.00 1.00 1.00 1.00 0.94 0.98 T 0.00 0.00 0.00 0.00 0.06 0.02 0000 --- --- --- --- 077725 00000 ------------ C 0.82 0.58 0.59 0.50 0.54 0.59 T 0.18 0.42 0.41 0.50 0.46 0.41 0000 --- --- --- --- 077818 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 077887* 077907 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 077927 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 078511 00000 ------------ G 1.00 1.00 0.82 0.98 1.00 0.95 A 0.00 0.00 0.18 0.02 0.00 0.05 0000 --- --- --- --- 078713 00000 ------------ C 1.00 1.00 0.93 1.00 1.00 0.98 T 0.00 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 078725 00000 ------------ C 0.97 0.96 1.00 1.00 1.00 0.99 T 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 078980 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 079150 00000 ------------ A 0.54 0.67 0.52 0.80 0.93 0.70 T 0.46 0.33 0.48 0.20 0.07 0.30 0000 --- --- --- --- 079476 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 080105 00000 ------------ G 0.82 0.95 1.00 1.00 1.00 0.97 A 0.18 0.05 0.00 0.00 0.00 0.03 0000 --- --- --- --- 080206 00000 ------------ C 0.96 0.96 1.00 1.00 1.00 0.99 G 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 080426 00450 SYNON G 1.00 1.00 0.93 1.00 1.00 0.98 A 0.00 0.00 0.07 0.00 0.00 0.02 0132 GCG GCA ALA(A) ALA(A) 080480 00504 SYNON C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0150 TTC TTT PHE(F) PHE(F) 081102 00000 ------------ A 0.94 0.95 0.47 0.77 0.92 0.77 G 0.06 0.05 0.53 0.23 0.08 0.23 0000 --- --- --- --- 081480 00000 ------------ T 0.71 0.88 1.00 0.98 1.00 0.94 A 0.29 0.12 0.00 0.02 0.00 0.06 0000 --- --- --- --- 081622 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 081725 00000 ------------ G 1.00 1.00 1.00 0.91 0.89 0.95 A 0.00 0.00 0.00 0.09 0.11 0.05 0000 --- --- --- --- 082036 00000 ------------ A 0.70 0.91 1.00 1.00 1.00 0.94 C 0.30 0.09 0.00 0.00 0.00 0.06 0000 --- --- --- --- 082123 00000 ------------ G 1.00 1.00 0.91 0.98 1.00 0.97 A 0.00 0.00 0.09 0.02 0.00 0.03 0000 --- --- --- --- 082304 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 082324 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 082349 00000 ------------ G 1.00 0.92 1.00 1.00 1.00 0.99 A 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 082350 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 082354 00000 ------------ A 0.97 0.92 1.00 1.00 1.00 0.98 G 0.03 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 082448 00000 ------------ G 0.93 0.96 1.00 1.00 1.00 0.98 A 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 082504 00000 ------------ T 0.83 1.00 1.00 0.98 1.00 0.97 C 0.17 0.00 0.00 0.02 0.00 0.03 0000 --- --- --- --- 082663 00000 ------------ G 1.00 1.00 0.95 1.00 1.00 0.99 A 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 082869 00000 ------------ G 0.96 0.92 0.98 1.00 1.00 0.98 A 0.04 0.08 0.02 0.00 0.00 0.02 0000 --- --- --- --- 083008 00000 ------------ G 0.93 0.79 0.91 0.93 0.67 0.84 A 0.07 0.21 0.09 0.07 0.33 0.16 0000 --- --- --- --- 083239 00000 ------------ G 0.96 0.90 0.94 1.00 1.00 0.97 A 0.04 0.10 0.06 0.00 0.00 0.03 0000 --- --- --- --- 083252 00000 ------------ T 1.00 1.00 1.00 0.97 1.00 0.99 G 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 083272 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 083705 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 083762 00000 ------------ A 0.80 1.00 1.00 1.00 1.00 0.97 C 0.20 0.00 0.00 0.00 0.00 0.03 0000 --- --- --- --- 084287 00000 ------------ G 1.00 0.96 0.98 0.61 0.57 0.80 C 0.00 0.04 0.02 0.39 0.42 0.20 0000 --- --- --- --- 084341 00000 ------------ A 1.00 1.00 1.00 0.95 1.00 0.99 G 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 084428 00000 ------------ T 0.86 1.00 1.00 1.00 1.00 0.98 G 0.14 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 084535 00000 ------------ C 0.86 1.00 1.00 1.00 1.00 0.98 T 0.14 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 084729 00000 ------------ - 0.89 0.94 0.97 1.00 1.00 0.97 + 0.11 0.06 0.03 0.00 0.00 0.03 0000 --- --- --- --- 084876 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 084954 00000 ------------ C 0.86 1.00 1.00 1.00 1.00 0.98 G 0.14 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 085052 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 G 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 085108 00000 ------------ G 0.68 0.67 0.24 0.48 0.83 0.57 A 0.32 0.33 0.76 0.52 0.17 0.43 0000 --- --- --- --- 085182 00000 ------------ C 1.00 1.00 0.97 1.00 1.00 0.99 G 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 085241 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 085263 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 085265 00000 ------------ A 1.00 1.00 0.97 0.98 1.00 0.99 T 0.00 0.00 0.03 0.02 0.00 0.01 0000 --- --- --- --- 085290 00000 ------------ T 1.00 1.00 0.93 1.00 0.91 0.96 C 0.00 0.00 0.07 0.00 0.09 0.04 0000 --- --- --- --- 085798 00000 ------------ T 0.56 0.91 0.94 0.98 1.00 0.93 C 0.44 0.09 0.06 0.02 0.00 0.07 0000 --- --- --- --- 085813 00000 ------------ A 0.56 0.86 0.94 0.97 1.00 0.92 G 0.44 0.14 0.06 0.03 0.00 0.08 0000 --- --- --- --- 085819 00000 ------------ G 0.94 1.00 1.00 1.00 1.00 0.99 A 0.06 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 085851 00000 ------------ T 1.00 1.00 0.97 1.00 1.00 0.99 C 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 085951 00000 ------------ G 1.00 0.92 1.00 1.00 1.00 0.99 C 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 086267 00000 ------------ C 1.00 1.00 0.95 0.58 0.55 0.79 T 0.00 0.00 0.05 0.42 0.45 0.21 0000 --- --- --- --- 086760 00688 NON-SYN G 0.57 0.58 0.23 0.42 0.83 0.52 A 0.43 0.42 0.77 0.57 0.17 0.48 0212 GTG ATG VAL(V) MET(M) 086919 00000 ------------ C 0.77 0.62 0.27 0.47 0.77 0.57 T 0.23 0.38 0.73 0.53 0.23 0.43 0000 --- --- --- --- 087195 00745 NON-SYN G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0231 GGG AGG GLY(G) ARG(R) 087288 00838 3' UTR G 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 087496 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 087621 00000 ------------ C 0.75 0.61 0.32 0.48 0.73 0.56 T 0.25 0.39 0.68 0.52 0.27 0.44 0000 --- --- --- --- 087836 00000 ------------ A 0.83 0.67 0.82 0.91 0.60 0.77 G 0.17 0.33 0.18 0.09 0.40 0.23 0000 --- --- --- --- 087840 00000 ------------ A 0.88 1.00 1.00 1.00 1.00 0.98 G 0.12 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 087884 00000 ------------ A 1.00 0.94 1.00 1.00 1.00 0.99 G 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 087928 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 088031 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 088411 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 088438 00000 ------------ T 1.00 0.95 1.00 1.00 1.00 0.99 C 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 088448 00000 ------------ C 1.00 1.00 1.00 1.00 0.97 0.99 G 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 088504 00000 ------------ G 0.77 0.68 0.24 0.48 0.73 0.55 A 0.23 0.32 0.76 0.52 0.27 0.45 0000 --- --- --- --- 088675 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 088948 00000 ------------ G 1.00 1.00 0.93 1.00 1.00 0.98 T 0.00 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 089129 00000 ------------ A 0.70 0.56 0.23 0.43 0.72 0.51 G 0.30 0.44 0.78 0.57 0.28 0.49 0000 --- --- --- --- 089183 00000 ------------ - 0.00 0.00 0.05 0.00 0.00 0.01 + 1.00 1.00 0.95 1.00 1.00 0.99 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000900: GGGCCCTGGGCGTGTT 001762: TGT 001848: TGTATG 001870: TG 070115: A 084729: C 089183: CTCA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele3 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq 077887 A 0.11 0.04 0.00 0.00 0.00 0.02 C 0.21 0.08 0.00 0.02 0.00 0.05 G 0.68 0.88 1.00 0.98 1.00 0.93