PCNA Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of GeneSNPs

TGTCCATCCT GTAACAATTG AAAATTTCTG GCTGGGCGTG GTGGCTCACG 50 | REPEAT
CCTGTAATCC CAGCACTTTG AGAGGCCGAG GCAGGTGGAT CACCTCAGGT 100
CAGGTGTTCA AGACCAGCCT GGCCAACATG GTGAAACCCC GTCTCTACTA 150 | var(149):[C:0.01]
AAAAAAAATA ATAATAATAA TACAAAAATT AGCCGGGGGT GGTGGTAGGC 200 | var(188):[C:0.21]
ACCTGTAATC CCAGATACTC GGGAGGCTGA GGCAGGAGAC TCACTTGAAC 250
CTGGGAGGCG GAGGTTGCAA TGAGCTGAGA TCGCGCCACT GTACTCCAGC 300
CTGGATGACA GAGCAGGACT CCATCTCAAA AAGAAAGGAA AAGAAAAGAA 350
AAAATATTAA ATGTGTACGC TCTTTGACTC AGCTGTATTA CTTCAAGGAG 400
TTGATATCAC CAAAATTGCC TAAGTGCTCA AAGGTGTTTG TAGTTAAACA 450
ACAGGAGATT GATAAATTAT GTTATATACA TGTGATGCTA TGTTTTAAAG 500
AGGTACTGAT ATGATAAAAG ATGTACGTGG CATAAAATTA AATGTACTTT 550
ATTAAGTACT TTTCCAAGTG TTTACGGAAT GAGTGCATTT TTGAAAAAAA 600
AAAAGTGTAT TCGAACTTTT AAAAAAGCTT TAAAAGCTTT ATACAATGAA 650 | var(647):[C:0.03]
CGATTGAGTG ATTATAAGAG CTGGCGGGGG AATGTTAAGA GGATGATAGG 700
GAGCTAAGTT TAACAGAACA ATTCACCTCT TTATCTTGTG ACACCTACGA 750
GCGCATCAAT TCTGTAATTG AAAAATAAAG TGCATATTTG CAGCAGCTGT 800
ACTCTCTTCA GGCTGCAAGG AGGCTTTTCC TCCCGGTAGG CTTGATTTGC 850 | var(806):[-:0.10]
ATTTCACTTT CACTTTCGTG GCTGGAAACT TTCTACCCAC GTAGTGGGAG 900
GCTGAGGAGC CACCATAAAG CTGGGGCTTG ACGAGCCGGG ACCGGGACCC 950
GATCTCCACA TATGCCCGGA CTTGTTCTGC GGCCGGGTTC AGGAGTCAAA 1000
GAGGCGGGGA GACCTGCGCG ACGCTGCCCC GCCCTGCGCC CGCTTCCTCC 1050
AATGTATGCT CTAGGGGGCG GGCCTCGCGG GGAGCATGGA CACGATTGGC 1100
CCTAAAGTCT TCCCCGCAAG GCCGTGGGCT GGACAGCGTG GTGACGTCGC 1150
AACGCGGCGC AGGGTGAGAG CGCGCGCTTG CGGACGCGGC GGCATTAAAC 1200
GGTTGCAGGC GTAGCAGAGT GGTCGTTGTC TTTCTAGGTC TCAGCCGGTC 1250 | Exon 1 | UTR
GTCGCGACGT TCGCCCGCTC GCTCTGAGGC TCCTGAAGCC GAAACCAGCT 1300
AGACTTTCCT CCTTCCCGCC TGCCTGTAGC GGCGTTGTTG CCACTCCGCC 1350
ACCA
TGTTCG AGGCGCGCCT GGTCCAGGGC TCCATCCTCA AGAAGGTGTT 1400
    M  F   E  A  R  L   V  Q  G   S  I  L   K  K  V  L 16
GGAGGCACTC AAGGACCTCA TCAACGAGGC CTGCTGGGAT ATTAGCTCCA 1450
  E  A  L   K  D  L   I  N  E  A   C  W  D   I  S  S   32
GCGGTGTAAA CCTGCAGAGC ATGGACTCGT CCCACGTCTC TTTGGTGCAG 1500
S  G  V  N   L  Q  S   M  D  S   S  H  V  S   L  V  Q  49
CTCACCCTGC GGTCTGAGGG CTTCGACACC TACCGCTGCG ACCGCAACCT 1550
 L  T  L   R  S  E  G   F  D  T   Y  R  C   D  R  N  L 66
GGCCATGGGC GTGAACCTCA CCAGGTGAGC CTCGCGGCCC CGGGAAGCCG 1600 | var(1589):[G:0.12]
  A  M  G   V  N  L   T  S                             74
GCCCCGGCCC GCCTGCACCT CCGGTGCTTG GCGGGAGCGC TTTCGAGCCT 1650 | var(1613):[A:0.14]
AGCCCTCATT GGCTGGCGTG GGCCATCCGC GCCTTCTCAT TGGCCTGCCA 1700
CGCAGTGGGG TGGGGCCCAG CTGAGCGCGC GGTTCGGAAA AGCCCGCGCT 1750
GGCTGCTGCG CGAACCTGCT TTTTCGCGCC AAAGTCACAA AGCGGGTGGT 1800
GGCGGGAAAA TCAAGGGTTT TTCCGCAGTG CCAGGAACAC TGTTCCAGGG 1850 | var(1810):[G:0.13]
CTCTTTGCTC ACTAAATCCT GTTGGCCTTG AATGGACGCT TTAGCTGTGG 1900
CTTTCTTGTT TCTGAGACGG TCTCGGTGTG TTGCCCGGGC TGGTCTCCAA 1950 | REPEAT
CTTCTGGGCT CAAGCGATCC TCCCGGCTCA GTCGCGGTTG ACTTTAAATG 2000
CTTTATAATG CCCTTGCGAG AAATGTGGCA GCCTGTCATC CTACTTAGTG 2050
GCAGGAGATT GTTTCTATCC AGAAGGGACA CTGCTGGTGG TATTTTAGTA 2100
TAAATACTGC CAGATGCGTC CCAAAACGTC TGCATTAATA ATGGCATCCT 2150
CCAGCAGTCC GCTTACCCTC CACCAGTTCT GAGACGGCCT GATGGGTGAG 2200 | var(2162):[T:0.38]
AGTGGTAACC CCTTCTAACC GCGTTCGAAA TACAGCCCTT CAGCAGACGG 2250
CGTTGATTTT AAAGCATGTG TCTCCTGTCT TCTAGTATGT CCAAAATACT 2300 | var(2282):[T:0.12] | Exon 2
                                        M   S  K  I  L 79
AAAATGCGCC GGCAATGAAG ATATCATTAC ACTAAGGGCC GAAGATAACG 2350
  K  C  A   G  N  E   D  I  I  T   L  R  A   E  D  N   95
CGGATACCTT GGCGCTAGTA TTTGAAGCAC CAAGTAAGTC GTACCTTTTT 2400
A  D  T  L   A  L  V   F  E  A   P                     106
ACCGAGTCAC GAAGCTACAG AAAATCAAAA CTCTGTGTCA GTATTTCTCA 2450
AAAGCATCTG CTTTCTTTTG GTAGACCAGG AGAAAGTTTC AGACTATGAA 2500 | Exon 3
                          N  Q   E  K  V  S   D  Y  E  115
ATGAAGTTGA TGGATTTAGA TGTTGAACAA CTTGGAATTC CAGTGAGTAT 2550
 M  K  L   M  D  L  D   V  E  Q   L  G  I   P          129
CAGTTTCTCA TTGTAGAGAG TGCTGTACAC AGGCACGATA GTTATGTCAT 2600
AGAATGTTTG TTTATTTTTA CAGACAGGGT CTTGGCTCTG TTGCCCAGGC 2650 | REPEAT
TGGAGTGCAG TAGTGCCATA TAGCTCTCTC TAACCTGGGA TTCCTGGGCT 2700
CAAGCAGTCC TCTTGCCTTA GTCTCCTAAG TGGCTAGGAA GGACTACGGG 2750
CCTGTCCCAC CACACCTGGC TAATTTTTTC ATTTTTGTGT GTGGGCGTGG 2800
GGGCAGTCTT GCCCAGGCTG GTCTGGAACT CCTGGCCTCA AGTGATCCTC 2850 | var(2805):[G:0.07]
CTCCGTCAAG ATATGTTAAT ATAATTTAAG CCTACTTCAT AACAACTTTT 2900
TCTAGAAATA TATCTACTGG TGCATGTTTC AAAGAGAGAT TTTAGTATTT 2950
GGATAGTTGT TCACCACAAG TCTAAAACTC ACAGGTTAAA TTTATTGTTT 3000 | var(2996):[C:0.01]
ACTGCCAGTT GTCTATTTGC ATTAACTTCC ATGAACCTCT TTTAAAATTT 3050 | var(3049):[G:0.01]
GTTTCCTTCT AGAATGCTTG CTTTTTATTA AGTGGATTTT AAAGCTGACT 3100
TGGAAGAAAT TTATCCAGGT TAGGTTTATA AACACCAAAG GAGAGAAGAA 3150
ATGTTTGAAT GTTGAAAATG CCTAATATAT TCTCTTGCTT TCTTTTAGAA 3200
AGTAGTTAGG CCTGCTTGCG CCATCATGAT TTCTGTGCCA TACTCTAATG 3250
TTCTCTTACT TTATCCCTGG AGGATGAGGA GGAGGAGGCT CTTGTTCCCT 3300
GGATGGTGCA TTTAATAGCC ATTTATTTTT TTGAGTGGAG TTTGTTAAGA 3350
AATTACGCAA GTCATATTTT AAAGTAATCA GAAAATATTG ATTCTGAGTT 3400 | var(3357):[A:0.01] | var(3388):[C:0.02]
GTTTAGGTGT TGCCTTTTAA GAAAGTGAGG GTGCCAAATC ATTAAATTTC 3450 | var(3407):[A:0.22]
TAACAATTAA CTTTTGGAAA ATTTTTGTTC TTAATAGGAA CAGGAGTACA 3500 | Exon 4
                                         E   Q  E  Y   133
GCTGTGTAGT AAAGATGCCT TCTGGTGAAT TTGCACGTAT ATGCCGAGAT 3550
S  C  V  V   K  M  P   S  G  E   F  A  R  I   C  R  D  150
CTCAGCCATA TTGGAGATGC TGTTGTAATT TCCTGTGCAA AAGACGGAGT 3600
 L  S  H   I  G  D  A   V  V  I   S  C  A   K  D  G  V 167
GAAATTTTCT GCAAGTGGAG AACTTGGAAA TGGAAACATT AAATTGTCAC 3650
  K  F  S   A  S  G   E  L  G  N   G  N  I   K  L  S   183
AGACAAGTAA TGTCGATAAA GAGGAGGAAG CTGTAAGTAG TTTTTAAGTA 3700
Q  T  S  N   V  D  K   E  E  E   A                     194
AAAAGAAAAT AGTTTGAAGA GAATTATAAT ACTGCTTATT AGGTTAATTG 3750 | var(3733):[C:0.01]
CTAAAATTAA AAGTAGACAG AATTGGATCC CAAGTAATTT CTGAAAATTG 3800
AGATACTGTT GAAATCTGCG AATGATTTAT AAGTGTCATC CAATTTAGAA 3850 | var(3822):[C:0.22]
TTATATTTGC AAGAAGGGAA TACAAATTCA GCACGTGTAC ATACCACAGA 3900
ACAGTGGTTT ATGGATCAAG TCCACACCGG CTCTTAAGGG TAGGATTGGG 3950
AAGTTAGGCG TATAACCTTT AGCTTTCTGG AGATACTTAC TCTCTTACCA 4000 | var(3960):[-:0.13]
AATAATTGAG CATAGGACAG CAGCTCAATA GAAGGATATG GTTAGGAGTA 4050
AAAGTCTACC TGTTTGGAGC ACTTATGTAA TCCTAATATT AGCTTACATG 4100 | REPEAT
TTGTGGGTCC AATTGGTAGC CCATTTTAAA GGTGGAGAAG CAGGCTGAGC 4150
AACCTTAAGT GACAATTTAG CCAAAGTCAC AGGCTGTAGG AATCAAAGGT 4200
TAAACAGGAA GGAGACTTCT CACTAAGGCT AGAAAGCAGA CTCCATGCAA 4250
CTTTGAGAGT ACCTAGAGAG CCCTTGTTTA ACCAAAATAG AAAGAACATG 4300 | REPEAT
GCAAAACCCC ATCTCTACTA AAAATATAAA AATTAGCCGG GTGTGGTGGC 4350
GCACACCTGT AATCCCAGCT ACTTGGAATG CTGAGATGGG AGAATGACTT 4400
GAACCGAGGA GGCGGAGGTT GCAGTGAGCC CAGATCATGC CACTCCCCTC 4450
CAGCCTGGGT GACAGAGCAA GATTCCATCT TAAACAAACA AAAAAAACTC 4500 | var(4471):[A:0.01] | var(4475):[T:0.08] | var(4493):[C:0.01]
GCTAACCTGG GCATAAATTA AAACTTTGTA AATCAAGGAC AAAGGTCCTA 4550 | var(4501):[A:0.01] | REPEAT
ACCTCATAAC CTTGTTAGGA TTAAATACGG TAGCATTAAA GAGCTTAGCA 4600
TATGCTGTGT GTGGCATATT ATAAGCTTAC AATAAATACT ATATATTGCT 4650
CTCTTGTCCC TTGAATGGGT AGTCAACATT TAGTTTAAAT AAAGGTAAAA 4700
TTCAGTTGAA AGGTTTTTTT TTAAATTAAT AAAGTCTAGG AGCTGATTCT 4750
TTATCTGTTT CCTGAATCAC ATTTCCACTC CTGCCAACCT CGTTTTTTTC 4800 | REPEAT
TTTTTCTGTT TTTCTTTGTT TTTGAGACAG GGTCTTGCTC TGTCCACCCA 4850
GGCTGGAGTG CGGTGGTGCA GTCGGTTCAC TACAGCCTCA AACTCCAGGG 4900 | var(4873):[T:0.14]
CTTAAGTGAT CCTCCTGCCT CAGTTTCCCA AGTAGCCGGG ACTACAGGTG 4950 | var(4922):[G:0.06] | var(4937):[T:0.14] | var(4948):[A:0.01]
TGTGCCAACA CACCTAGCCT GGTTTCCCCT AATTTCATTT TCCCCCTTCC 5000
ATTACAATCT ATTTGTTGAA GAAATTAGAT CATTTATTAA GTTTTCCAGA 5050 | REPEAT
GTTTGGATTT TGCTGATTGC ATTCCTGTGT ATACATAAAT TCCTCTACCC 5100 | var(5095):[T:0.01]
TGTGTGTCCT ACAGACTGGT AGCTATAGCC CTGGAGCCTT GATATTCAGG 5150
GTGTTTTGTT TCGGGGGTGA GAGAGCAAGA ATATAGGTGG TGGTGTGTGC 5200
CTCTAGTAGG AGGCACAGGG TGTCTGGATG TGTTTGCAAT GTTAGCAGCT 5250
ATAATAGTCA TTGTCTAGAT CCATTAAGTC ATTAATTAGA GTTTGCAGAG 5300
CTGAAATTAA TACGTTTTAT TCACTTATTG GCTGCTTATT AGAAAAACTT 5350 | var(5328):[C:0.04]
CCATAAAGAA AAGCTTTCCC ATATTATATA ATTTGGTTAT CTAAATTATA 5400
GCTATAGGAA AGACAAGCTA GATAATCGAG TCTTTTGCTT TATGTATCAG 5450
TCTTCAAAAT TTTCATAGCT CCCTCCAAAG TGACCAATAC AAGTGTTTGT 5500
GGGTTTTTAT AAATATATAA TGAGCTAATA GATTGCAACT TTCTTGATGT 5550
TTTTCAATGA TGAATCTTTT GTTTTGTAGG TTACCATAGA GATGAATGAA 5600 | Exon 5
                                 V  T  I  E   M  N  E  201
CCAGTTCAAC TAACTTTTGC ACTGAGGTAC CTGAACTTCT TTACAAAAGC 5650
 P  V  Q   L  T  F  A   L  R  Y   L  N  F   F  T  K  A 218
CACTCCACTC TCTTCAACGG TGACACTCAG TATGTCTGCA GATGTACCCC 5700 | var(5699):[G:0.01]
  T  P  L   S  S  T   V  T  L  S   M  S  A   D  V  P   234
TTGGTAAGAT AATAAATTTG AACCTTGTTT TGTAGGTAGT CATATGTGAT 5750
L                                                      235
ACATACTCCT CAGTAATTAA CCATCTTCCT GTCTTTCAGT TGTAGAGTAT 5800 | Exon 6
                                          V   V  E  Y  239
AAAATTGCGG ATATGGGACA CTTAAAATAC TACTTGGCTC CCAAGATCGA 5850
 K  I  A   D  M  G  H   L  K  Y   Y  L  A   P  K  I  E 256
GGATGAAGAA GGATCTTAGG CATTCTTAAA ATTCAAGAAA ATAAAACTAA 5900 | UTR
  D  E  E   G  S                                       261
GCTCTTTGAG AACTGCTTCT AAGATGCCAG CATATACTGA AGTCTTTTCT 5950
GTCACCAAAT TTGTACCTCT AAGTACATAT GTAGATATTG TTTTCTGTAA 6000
ATAACCTATT TTTTTCTCTA TTCTCTGCAA TTTGTTTAAA GAATAAAGTC 6050 | var(6018):[T:0.06] | var(6027):[C:0.12]
CAAAGTCAGA TCTGGTCTAG TTAACCTAGA AGTATTTTTG TCTCTTAGAA 6100
ATACTTGTGA TTTTTATAAT ACAAAAGGGT CTTGACTCTA AATGCAGTTT 6150
TAAGAATTGT TTTTGAATTT AAATAAAGTT ACTTGAATTT CAAAC
ATCAC 6200
AGGGCAGTGT CTTCATTTTG ACCAGGACTG TTGGAAGTAT CCTACTGAAT 6250 | var(6203):[A:0.03]
TCCCAGCTAC AGCTACCCTT TCGTTTAAAT GGTTTTTCAG TTTAGAGCAG 6300
CCTGATGGAG ATCAAAAGGA TTTCAAATAC AGTAGGTTAC TAGATATTTT 6350
AGGGGATTCA CTTGTCAAAC TTGTTATTCC AATTTGAGCT CAAGGAACAA 6400
GTGAGAGAGT AGTACAAATC CTGTGTATTT CATTTTACTT GGCAAAAATT 6450 | var(6438):[T:0.13]
AATACTCTTC AGAAGCTTAA TGTACCCAAA GTCGTGTGGG CTTTATAAGA 6500 | var(6477):[G:0.48]
TGTTAATGGA GTGTTTCTTT TTAGCCTGGG GAATCTTACA AGAGTCTTGG 6550
ATGTTTCAGT AGAGCTGTAA TGGGGCCCAA GGAGTATGGT TGTACAAAAT 6600 | var(6574):[A:0.12]
TTCTCTAGTA TAAGTACACT TTGCAACTTC ACTCAAAGGA TGAAGATGTC 6650
TTAAATTCCA CGGATGTTGG ATCCAACCAA GAAAGTGAAA AAGCCCTGAA 6700 | var(6661):[T:0.12] | var(6700):[C:0.01]
GTTGTGAAGA AAGACTTAAA AACATTCCCA CTAATAGCTA CAAGTTCACT 6750 | var(6750):[G:0.01]
GTGTGCTGTG TATTAAGAAT TTTTTGCCAG GCACGGTGCC TCACACCTGT 6800 | REPEAT | var(6785):[A:0.01]
AATCCCAGCA CTTTGGGAGG TAGGCGGATC AACTAAAGTC AGGAGTTCGA 6850
GACCAGCCTG GTCAACATGG TGAAACCCCA TTTCTACTAA AAATGCAAAA 6900
AAAAAATTAG CCAGGCATGG TGGCACATGC CTGTAGTCCC AGCTACTTGG 6950
GAGGCTGAGG CAGAAGAATC ACTTAAACCC AGGAGGTGGA GGTTGCAGTG 7000
AGCCAAGATC ATGCCACTGC ACTCCAGCCT GGTCAACAGA GTGAGACTCC 7050
ATCTCAAAAA AAATTATTGG CTGGTTTAAT AGTAGTAGGT TATCAGAACT 7100 | REPEAT
TACTAACATT AGTATCACTA AAGTAGGTAT ACAACCCCTG CTGCTCAATT 7150
TGGCTTTAGA AAAAACATTT TTAAAAACTG CTTTATCATA ATCCTTTTTT 7200
CCAGTGCATT TTTGTGTTTG GTAGATTAAA TGACTGATTT CTTTCTTAAA 7250 | var(7234):[-:0.30]
TTACTTGGAC TGAGTTCTAG TTACTGGACA TGAGAATTAA CCATGTCCAG 7300 | var(7274):[G:0.11]
TAGTTAAGTT CATTTTCCTA CAGTGTGCCT GTGAGTGGAG AAGGAAATAG 7350 | var(7305):[-:0.87] | var(7325):[C:0.01] | REPEAT
GCTGCAAAAG AGCCCGATGG AACTTTGGGG TGATGGATAT ATTTCCATCT 7400
AGATTGGTGA TGGTTCTAGG ACCGTATGTA TTTTCAGAGC TCATCTATTT 7450
GTACTTGTGT ATAAATACTT CAATAAACCT AACTTTTTAA AAAGCTTCAT 7500 | var(7471):[A:0.01]
TTGCCGCAAA ATGTCCCTTG TGGGCAGGCC TTTTACCTGG ACAAGCCCTA 7550
AAGATAAGCA CAAGTTTGTG GGGCTATTCA AGGGAAGTAT AGTGGGGTGC 7600
TGACAGCACA GACAAGTGTG CTATTCAAGG GAAGT