Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000108 00000 ------------ G 1.00 1.00 0.93 0.95 1.00 0.97 A 0.00 0.00 0.07 0.05 0.00 0.03 0000 --- --- --- --- 000174 00000 ------------ G 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000195 00000 ------------ C 0.96 0.95 1.00 1.00 1.00 0.99 T 0.04 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000243 00000 ------------ C 0.61 0.59 0.81 0.68 0.60 0.67 A 0.39 0.41 0.19 0.32 0.40 0.33 0000 --- --- --- --- 000340 00000 ------------ C 0.97 1.00 0.86 1.00 1.00 0.96 G 0.03 0.00 0.14 0.00 0.00 0.04 0000 --- --- --- --- 000410 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000438 00000 ------------ A 0.58 0.65 0.95 0.74 0.64 0.73 G 0.42 0.35 0.05 0.26 0.36 0.27 0000 --- --- --- --- 000530 00000 ------------ T 0.97 1.00 0.86 1.00 1.00 0.96 C 0.03 0.00 0.14 0.00 0.00 0.04 0000 --- --- --- --- 000533 00000 ------------ T 1.00 1.00 0.95 1.00 1.00 0.99 C 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 000621 00000 ------------ - 1.00 0.95 1.00 1.00 1.00 0.99 + 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000654 00000 ------------ G 0.90 1.00 0.98 0.84 0.81 0.89 A 0.10 0.00 0.02 0.16 0.19 0.11 0000 --- --- --- --- 000836 00000 ------------ C 0.57 0.55 0.92 0.74 0.57 0.68 T 0.43 0.45 0.08 0.26 0.42 0.32 0000 --- --- --- --- 000924 00000 ------------ C 1.00 1.00 1.00 1.00 0.97 0.99 T 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 000961 00000 ------------ T 0.97 0.83 1.00 1.00 1.00 0.97 C 0.03 0.17 0.00 0.00 0.00 0.03 0000 --- --- --- --- 001141 00000 ------------ A 0.97 1.00 0.86 1.00 1.00 0.96 G 0.03 0.00 0.14 0.00 0.00 0.04 0000 --- --- --- --- 001183 00000 ------------ A 0.97 1.00 0.86 1.00 1.00 0.96 C 0.03 0.00 0.14 0.00 0.00 0.04 0000 --- --- --- --- 001358 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001607 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001694 00000 ------------ G 0.96 0.96 1.00 1.00 1.00 0.99 A 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001821 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 002112 00287 NON-SYN G 1.00 1.00 1.00 1.00 0.96 0.99 C 0.00 0.00 0.00 0.00 0.04 0.01 0094 CGC CCC ARG(R) PRO(P) 002163 00338 NON-SYN T 1.00 1.00 0.98 0.81 0.81 0.89 A 0.00 0.00 0.02 0.19 0.19 0.11 0111 CTG CAG LEU(L) GLN(Q) 002208 00383 NON-SYN C 1.00 1.00 0.86 0.92 0.69 0.86 G 0.00 0.00 0.14 0.08 0.31 0.14 0126 GCG GGG ALA(A) GLY(G) 002350 00525 SYNON C 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0173 CCC CCG PRO(P) PRO(P) 002700 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 A 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002768 00000 ------------ C 0.90 0.92 1.00 1.00 1.00 0.97 T 0.10 0.08 0.00 0.00 0.00 0.03 0000 --- --- --- --- 002929 00000 ------------ C 0.90 1.00 0.98 1.00 0.86 0.95 T 0.10 0.00 0.02 0.00 0.14 0.05 0000 --- --- --- --- 002977 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 003016 00000 ------------ C 0.83 0.92 0.59 0.53 0.77 0.70 T 0.17 0.08 0.41 0.47 0.23 0.30 0000 --- --- --- --- 020306 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 020332 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 020407 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 020421 00000 ------------ G 0.47 0.42 0.64 0.77 0.56 0.60 A 0.53 0.58 0.36 0.23 0.44 0.40 0000 --- --- --- --- 020478 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 020499 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 020530 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 020847 00825 SYNON G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0273 CTG CTA LEU(L) LEU(L) 021091 00000 ------------ C 1.00 1.00 1.00 0.93 0.98 0.98 T 0.00 0.00 0.00 0.07 0.02 0.02 0000 --- --- --- --- 021208 00000 ------------ G 0.47 0.42 0.66 0.77 0.56 0.60 A 0.53 0.58 0.34 0.23 0.44 0.40 0000 --- --- --- --- 021409 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 023197 00000 ------------ C 1.00 1.00 0.97 1.00 1.00 0.99 T 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 023583 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 023660 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 C 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 024858 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 024970 00000 ------------ A 0.97 1.00 0.85 1.00 1.00 0.96 G 0.03 0.00 0.15 0.00 0.00 0.04 0000 --- --- --- --- 028415 00000 ------------ T 0.97 0.92 1.00 1.00 1.00 0.98 C 0.03 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 028421 00000 ------------ C 1.00 1.00 0.95 0.98 1.00 0.98 T 0.00 0.00 0.05 0.02 0.00 0.02 0000 --- --- --- --- 028435 00000 ------------ G 0.97 0.92 1.00 1.00 1.00 0.98 A 0.03 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 028533 00000 ------------ T 0.33 0.25 0.50 0.70 0.57 0.51 C 0.67 0.75 0.50 0.30 0.43 0.49 0000 --- --- --- --- 028623 00000 ------------ T 0.93 1.00 0.55 0.59 0.83 0.74 A 0.07 0.00 0.45 0.41 0.17 0.26 0000 --- --- --- --- 028995 00000 ------------ A 1.00 0.95 1.00 1.00 1.00 0.99 G 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 029079 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 029098 00000 ------------ C 0.83 0.82 0.55 0.30 0.50 0.55 A 0.17 0.18 0.45 0.70 0.50 0.45 0000 --- --- --- --- 029651 00000 ------------ - 0.61 0.73 0.71 0.82 0.84 0.75 + 0.39 0.27 0.29 0.18 0.16 0.25 0000 --- --- --- --- 030052 00000 ------------ C 0.93 1.00 1.00 1.00 1.00 0.99 T 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 030070 00000 ------------ G 1.00 1.00 1.00 1.00 0.91 0.98 A 0.00 0.00 0.00 0.00 0.09 0.02 0000 --- --- --- --- 030212 00000 ------------ - 0.90 0.91 1.00 1.00 1.00 0.97 + 0.10 0.09 0.00 0.00 0.00 0.03 0000 --- --- --- --- 030988 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 031170 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 031202 00000 ------------ T 1.00 1.00 1.00 1.00 0.96 0.99 C 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 031608 00000 ------------ G 1.00 1.00 0.93 0.95 1.00 0.97 A 0.00 0.00 0.07 0.05 0.00 0.03 0000 --- --- --- --- 031732 00000 ------------ G 0.50 0.45 0.66 0.75 0.56 0.61 A 0.50 0.55 0.34 0.25 0.44 0.39 0000 --- --- --- --- 031835 00000 ------------ G 0.93 0.95 0.58 0.57 0.83 0.75 A 0.07 0.05 0.42 0.42 0.17 0.25 0000 --- --- --- --- 035043 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 035123 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 035323 00000 ------------ C 0.97 0.92 1.00 1.00 1.00 0.98 T 0.03 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 035371 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 035496 00000 ------------ A 0.93 0.96 1.00 1.00 1.00 0.98 C 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 035655 00000 ------------ C 0.93 0.96 1.00 1.00 1.00 0.98 T 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 035726 00000 ------------ C 0.97 1.00 0.84 1.00 1.00 0.96 T 0.03 0.00 0.16 0.00 0.00 0.04 0000 --- --- --- --- 036072 01758 3' UTR G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 036251 01937 3' UTR A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 036415 02101 3' UTR C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 036602 00000 ------------ G 0.93 1.00 1.00 1.00 1.00 0.99 A 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 036799 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 036864 00000 ------------ G 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 036915 00000 ------------ C 1.00 0.92 1.00 1.00 0.90 0.96 T 0.00 0.08 0.00 0.00 0.10 0.04 0000 --- --- --- --- 037140 00000 ------------ C 0.93 0.96 0.98 0.93 0.88 0.93 T 0.07 0.04 0.02 0.07 0.12 0.07 0000 --- --- --- --- 037182 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 037262 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 037569 00000 ------------ C 0.97 0.96 1.00 1.00 1.00 0.99 G 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 037617 00000 ------------ C 0.96 0.95 1.00 1.00 1.00 0.99 T 0.04 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 037679 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 037706 00000 ------------ G 0.93 1.00 1.00 1.00 1.00 0.99 A 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 037739 00000 ------------ A 1.00 1.00 1.00 0.91 0.98 0.98 G 0.00 0.00 0.00 0.09 0.02 0.02 0000 --- --- --- --- 037782 00000 ------------ G 1.00 0.95 1.00 1.00 1.00 0.99 A 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000621: T 029651: TTCCCC 030212: C