Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000308 00000 ------------ C 1.00 1.00 1.00 1.00 0.91 0.97 A 0.00 0.00 0.00 0.00 0.09 0.03 0000 --- --- --- --- 000347 00000 ------------ C 1.00 1.00 1.00 1.00 0.91 0.97 T 0.00 0.00 0.00 0.00 0.09 0.03 0000 --- --- --- --- 000373 00000 ------------ A 0.89 0.88 1.00 1.00 0.91 0.95 G 0.11 0.12 0.00 0.00 0.09 0.05 0000 --- --- --- --- 000481 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000613 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000687 00000 ------------ A 1.00 1.00 1.00 1.00 0.88 0.96 G 0.00 0.00 0.00 0.00 0.12 0.04 0000 --- --- --- --- 000716 00000 ------------ T 1.00 0.83 1.00 1.00 1.00 0.99 A 0.00 0.17 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000957 00000 ------------ C 0.88 1.00 1.00 1.00 1.00 0.98 T 0.12 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 001029 00000 ------------ T 1.00 1.00 1.00 1.00 0.88 0.97 C 0.00 0.00 0.00 0.00 0.12 0.03 0000 --- --- --- --- 001061 00000 ------------ A 0.77 0.83 0.90 0.86 0.79 0.84 G 0.23 0.17 0.10 0.14 0.21 0.16 0000 --- --- --- --- 001200 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001245 00000 ------------ C 0.77 0.83 0.90 0.88 0.79 0.84 T 0.23 0.17 0.10 0.12 0.21 0.16 0000 --- --- --- --- 001284 00000 ------------ C 0.96 0.96 1.00 1.00 1.00 0.99 T 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001305 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001534 00000 ------------ C 1.00 1.00 1.00 1.00 0.88 0.97 T 0.00 0.00 0.00 0.00 0.12 0.03 0000 --- --- --- --- 001588 00000 ------------ A 1.00 0.75 0.93 1.00 0.85 0.91 G 0.00 0.25 0.07 0.00 0.15 0.09 0000 --- --- --- --- 001644 00000 ------------ C 1.00 1.00 1.00 1.00 0.85 0.96 T 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 001791 00000 ------------ G 1.00 1.00 1.00 0.94 1.00 0.99 C 0.00 0.00 0.00 0.06 0.00 0.01 0000 --- --- --- --- 001826 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 001860 00000 ------------ G 1.00 1.00 1.00 1.00 0.85 0.96 A 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 001865 00000 ------------ C 0.79 0.83 0.93 0.86 0.80 0.85 G 0.21 0.17 0.07 0.14 0.20 0.15 0000 --- --- --- --- 001916 00000 ------------ G 1.00 1.00 1.00 1.00 0.86 0.97 C 0.00 0.00 0.00 0.00 0.14 0.03 0000 --- --- --- --- 001968 00000 ------------ C 1.00 0.79 0.93 1.00 0.83 0.92 T 0.00 0.21 0.07 0.00 0.17 0.08 0000 --- --- --- --- 002058 00060 NON-SYN T 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0015 CTC CAC LEU(L) HIS(H) 002304 00000 ------------ C 1.00 1.00 1.00 1.00 0.87 0.97 G 0.00 0.00 0.00 0.00 0.13 0.03 0000 --- --- --- --- 002331 00000 ------------ G 1.00 1.00 1.00 1.00 0.87 0.97 A 0.00 0.00 0.00 0.00 0.13 0.03 0000 --- --- --- --- 002395 00000 ------------ C 1.00 1.00 1.00 1.00 0.87 0.97 T 0.00 0.00 0.00 0.00 0.13 0.03 0000 --- --- --- --- 002512 00000 ------------ C 0.90 0.91 1.00 0.98 0.96 0.96 G 0.10 0.09 0.00 0.02 0.04 0.04 0000 --- --- --- --- 002627 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002643 00000 ------------ G 0.67 0.64 0.71 0.66 0.28 0.58 A 0.33 0.36 0.29 0.34 0.72 0.42 0000 --- --- --- --- 002656 00000 ------------ C 1.00 1.00 1.00 1.00 0.87 0.97 T 0.00 0.00 0.00 0.00 0.13 0.03 0000 --- --- --- --- 002668 00000 ------------ - 1.00 1.00 1.00 1.00 0.87 0.97 + 0.00 0.00 0.00 0.00 0.13 0.03 0000 --- --- --- --- 002735 00000 ------------ C 1.00 1.00 1.00 0.95 1.00 0.99 T 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 004183 00000 ------------ C 0.92 0.78 0.92 0.91 0.67 0.84 A 0.08 0.22 0.08 0.09 0.33 0.16 0000 --- --- --- --- 004203 00000 ------------ G 0.73 0.72 0.88 0.84 0.57 0.76 A 0.27 0.28 0.12 0.16 0.43 0.24 0000 --- --- --- --- 004234 00000 ------------ G 0.71 0.72 0.88 0.87 0.77 0.80 A 0.29 0.28 0.12 0.13 0.23 0.20 0000 --- --- --- --- 004246 00000 ------------ A 0.73 0.72 0.88 0.84 0.57 0.76 T 0.27 0.28 0.12 0.16 0.43 0.24 0000 --- --- --- --- 004270 00000 ------------ G 1.00 1.00 0.97 1.00 1.00 0.99 A 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 004286 00000 ------------ C 1.00 1.00 1.00 1.00 0.80 0.96 T 0.00 0.00 0.00 0.00 0.20 0.04 0000 --- --- --- --- 004340 00000 ------------ A 0.73 0.78 0.88 0.88 0.57 0.77 G 0.27 0.22 0.12 0.12 0.43 0.23 0000 --- --- --- --- 004497 00000 ------------ T 1.00 0.91 1.00 1.00 1.00 0.99 C 0.00 0.09 0.00 0.00 0.00 0.01 0000 --- --- --- --- 004574 00000 ------------ G 1.00 0.96 1.00 1.00 0.98 0.99 A 0.00 0.04 0.00 0.00 0.02 0.01 0000 --- --- --- --- 004612 00000 ------------ G 1.00 1.00 1.00 1.00 0.87 0.97 A 0.00 0.00 0.00 0.00 0.13 0.03 0000 --- --- --- --- 004867 00000 ------------ T 1.00 0.96 1.00 1.00 0.96 0.98 C 0.00 0.04 0.00 0.00 0.04 0.02 0000 --- --- --- --- 005146 00000 ------------ C 0.90 0.75 0.81 0.77 0.58 0.75 T 0.10 0.25 0.19 0.23 0.42 0.25 0000 --- --- --- --- 005302 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 005567 00000 ------------ C 0.93 0.96 1.00 1.00 1.00 0.98 T 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 005577 00000 ------------ C 1.00 1.00 0.95 0.89 1.00 0.96 A 0.00 0.00 0.05 0.11 0.00 0.04 0000 --- --- --- --- 005868 00000 ------------ A 1.00 1.00 1.00 1.00 0.85 0.96 G 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 006135 00000 ------------ A 1.00 1.00 1.00 1.00 0.86 0.96 G 0.00 0.00 0.00 0.00 0.14 0.04 0000 --- --- --- --- 006199 00000 ------------ G 1.00 1.00 1.00 1.00 0.86 0.96 A 0.00 0.00 0.00 0.00 0.14 0.04 0000 --- --- --- --- 006206 00000 ------------ A 0.90 1.00 1.00 1.00 1.00 0.99 G 0.10 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 006267 00000 ------------ A 0.65 0.78 0.86 0.89 0.86 0.83 G 0.35 0.22 0.14 0.11 0.14 0.17 0000 --- --- --- --- 006334 00000 ------------ C 1.00 1.00 1.00 1.00 0.86 0.96 T 0.00 0.00 0.00 0.00 0.14 0.04 0000 --- --- --- --- 006369 00000 ------------ T 1.00 1.00 1.00 1.00 0.86 0.96 C 0.00 0.00 0.00 0.00 0.14 0.04 0000 --- --- --- --- 006493 00000 ------------ T 0.93 0.94 1.00 1.00 1.00 0.99 C 0.07 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 006528 00000 ------------ T 1.00 1.00 1.00 1.00 0.90 0.98 C 0.00 0.00 0.00 0.00 0.10 0.02 0000 --- --- --- --- 006573 00302 NON-SYN G 1.00 1.00 1.00 1.00 0.90 0.98 C 0.00 0.00 0.00 0.00 0.10 0.02 0096 GTG CTG VAL(V) LEU(L) 006816 00000 ------------ G 0.77 0.79 0.86 0.89 0.67 0.80 C 0.23 0.21 0.14 0.11 0.33 0.20 0000 --- --- --- --- 006829 00000 ------------ T 1.00 1.00 1.00 1.00 0.85 0.96 C 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 007041 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 007065 00000 ------------ C 1.00 1.00 1.00 1.00 0.85 0.96 T 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 007095 00000 ------------ T 1.00 1.00 1.00 1.00 0.85 0.96 G 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 007204 00000 ------------ C 0.90 0.79 0.82 0.77 0.58 0.76 A 0.10 0.21 0.18 0.23 0.42 0.24 0000 --- --- --- --- 007267 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007327 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009287 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 009829 00000 ------------ G 0.96 1.00 1.00 1.00 0.85 0.96 C 0.04 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 009914 00000 ------------ T 0.96 1.00 1.00 1.00 0.85 0.96 C 0.04 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 009915 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 010004 00000 ------------ T 1.00 1.00 1.00 0.95 1.00 0.99 C 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 010097 00000 ------------ - 0.00 0.00 0.00 0.00 0.15 0.04 + 1.00 1.00 1.00 1.00 0.85 0.96 0000 --- --- --- --- 010326 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010756 00000 ------------ C 1.00 1.00 1.00 1.00 0.92 0.98 T 0.00 0.00 0.00 0.00 0.08 0.02 0000 --- --- --- --- 010779 00000 ------------ C 0.42 0.42 0.59 0.70 0.73 0.60 T 0.58 0.58 0.41 0.30 0.27 0.40 0000 --- --- --- --- 010780 00000 ------------ C 0.96 1.00 1.00 1.00 0.85 0.96 A 0.04 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 010876 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 011048 00000 ------------ C 0.96 1.00 1.00 1.00 0.85 0.96 T 0.04 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 011424 00000 ------------ T 0.96 1.00 1.00 1.00 0.87 0.96 C 0.04 0.00 0.00 0.00 0.13 0.04 0000 --- --- --- --- 011571 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 011634 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 011654 00000 ------------ C 0.96 1.00 1.00 1.00 0.87 0.96 A 0.04 0.00 0.00 0.00 0.13 0.04 0000 --- --- --- --- 011758 00509 NON-SYN G 0.88 0.82 0.75 0.86 0.83 0.82 A 0.12 0.18 0.25 0.14 0.17 0.18 0165 GCC ACC ALA(A) THR(T) 012027 00000 ------------ T 0.97 1.00 1.00 1.00 0.85 0.96 A 0.03 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 012171 00000 ------------ C 0.96 1.00 1.00 1.00 0.85 0.96 A 0.04 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 012212 00000 ------------ T 0.96 1.00 1.00 1.00 0.85 0.96 C 0.04 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 012229 00000 ------------ G 0.88 0.79 0.68 0.81 0.79 0.78 A 0.12 0.21 0.32 0.19 0.21 0.22 0000 --- --- --- --- 012323 00000 ------------ G 0.88 0.79 0.75 0.81 0.83 0.81 T 0.12 0.21 0.25 0.19 0.17 0.19 0000 --- --- --- --- 012537 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 012778 00000 ------------ G 0.58 0.45 0.66 0.80 0.92 0.73 T 0.42 0.55 0.34 0.20 0.08 0.27 0000 --- --- --- --- 012803 00000 ------------ C 0.96 0.95 0.98 1.00 0.85 0.95 T 0.04 0.05 0.02 0.00 0.15 0.05 0000 --- --- --- --- 012993 00676 SYNON G 1.00 1.00 1.00 1.00 0.85 0.96 A 0.00 0.00 0.00 0.00 0.15 0.04 0220 TCG TCA SER(S) SER(S) 013069 00752 NON-SYN T 1.00 1.00 1.00 0.90 0.98 0.97 A 0.00 0.00 0.00 0.10 0.02 0.03 0246 TGC AGC CYS(C) SER(S) 013072 00755 NON-SYN G 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0247 GAT CAT ASP(D) HIS(H) 013373 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 013512 00000 ------------ G 1.00 0.95 1.00 1.00 1.00 0.99 A 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013533 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013564 00000 ------------ T 1.00 1.00 0.95 0.95 0.82 0.93 C 0.00 0.00 0.05 0.05 0.17 0.07 0000 --- --- --- --- 013705 00000 ------------ C 0.85 0.96 0.97 1.00 1.00 0.97 G 0.15 0.04 0.03 0.00 0.00 0.03 0000 --- --- --- --- 013757 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 014014 00000 ------------ C 0.95 1.00 1.00 1.00 1.00 0.99 A 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014058 00000 ------------ G 0.68 0.67 0.70 0.40 0.42 0.54 C 0.32 0.33 0.30 0.60 0.58 0.46 0000 --- --- --- --- 014073 00000 ------------ G 0.86 0.75 0.75 0.86 0.86 0.82 A 0.14 0.25 0.25 0.14 0.14 0.18 0000 --- --- --- --- 014174 00000 ------------ T 0.96 0.96 1.00 1.00 1.00 0.99 C 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014313 00000 ------------ G 1.00 1.00 0.97 1.00 1.00 0.99 A 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 014510 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014564 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 014901 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014932 00000 ------------ C 1.00 1.00 1.00 1.00 0.94 0.98 T 0.00 0.00 0.00 0.00 0.06 0.02 0000 --- --- --- --- 015044 00000 ------------ T 1.00 1.00 1.00 1.00 0.84 0.96 C 0.00 0.00 0.00 0.00 0.16 0.04 0000 --- --- --- --- 015113 00000 ------------ T 0.65 0.58 0.70 0.80 0.91 0.76 G 0.35 0.42 0.30 0.20 0.09 0.24 0000 --- --- --- --- 015156 00000 ------------ C 0.65 0.58 0.70 0.80 0.91 0.76 T 0.35 0.42 0.30 0.20 0.09 0.24 0000 --- --- --- --- 015162 00000 ------------ A 0.55 0.83 0.55 0.39 0.39 0.51 G 0.45 0.17 0.45 0.61 0.61 0.49 0000 --- --- --- --- 015228 00000 ------------ C 1.00 0.96 1.00 0.95 0.84 0.94 T 0.00 0.04 0.00 0.05 0.16 0.06 0000 --- --- --- --- 015619 00000 ------------ C 0.67 0.67 0.62 0.50 0.54 0.57 T 0.33 0.33 0.38 0.50 0.46 0.43 0000 --- --- --- --- 015768 00000 ------------ G 1.00 1.00 1.00 1.00 0.87 0.96 A 0.00 0.00 0.00 0.00 0.13 0.04 0000 --- --- --- --- 015901 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 015904 00000 ------------ C 0.71 0.58 0.75 0.82 0.54 0.69 T 0.29 0.42 0.25 0.18 0.46 0.31 0000 --- --- --- --- 015932 00000 ------------ A 0.89 0.96 0.95 0.86 0.94 0.92 G 0.11 0.04 0.05 0.14 0.06 0.08 0000 --- --- --- --- 015948 00000 ------------ A 0.64 0.62 0.75 0.68 0.67 0.68 G 0.36 0.38 0.25 0.32 0.33 0.32 0000 --- --- --- --- 015962 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 015969 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 015971 00000 ------------ C 1.00 0.92 1.00 0.95 1.00 0.98 G 0.00 0.08 0.00 0.05 0.00 0.02 0000 --- --- --- --- 015975 00000 ------------ - 0.64 0.67 0.45 0.34 0.35 0.46 + 0.36 0.33 0.55 0.66 0.65 0.54 0000 --- --- --- --- 016045 00000 ------------ G 0.54 0.42 0.55 0.66 0.54 0.55 C 0.46 0.58 0.45 0.34 0.46 0.45 0000 --- --- --- --- 016117 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 016121 00000 ------------ C 0.58 0.75 0.68 0.80 0.70 0.71 A 0.42 0.25 0.32 0.20 0.30 0.29 0000 --- --- --- --- 016231 00000 ------------ C 1.00 1.00 0.98 0.98 1.00 0.99 T 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 016232 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 016275 00000 ------------ C 0.87 1.00 0.80 0.91 0.85 0.87 T 0.13 0.00 0.20 0.09 0.15 0.13 0000 --- --- --- --- 016295 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 016319 00000 ------------ G 0.73 0.83 0.39 0.48 0.41 0.53 T 0.27 0.17 0.61 0.52 0.59 0.47 0000 --- --- --- --- 016545 00000 ------------ - 0.00 0.00 0.00 0.00 0.05 0.01 + 1.00 1.00 1.00 1.00 0.95 0.99 0000 --- --- --- --- 016831 00000 ------------ C 0.90 0.62 1.00 0.95 0.85 0.89 A 0.10 0.38 0.00 0.05 0.15 0.11 0000 --- --- --- --- 016844 00000 ------------ A 0.90 0.96 1.00 1.00 1.00 0.98 C 0.10 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 016963* 016996 00000 ------------ A 1.00 1.00 1.00 1.00 0.85 0.96 T 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 017006 00000 ------------ C 1.00 1.00 1.00 1.00 0.85 0.96 T 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 017017 00000 ------------ - 0.00 0.00 0.00 0.00 0.15 0.04 + 1.00 1.00 1.00 1.00 0.85 0.96 0000 --- --- --- --- 017049 00000 ------------ - 1.00 1.00 1.00 1.00 0.85 0.96 + 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 017068 00000 ------------ C 0.90 1.00 0.77 0.93 0.96 0.91 T 0.10 0.00 0.23 0.07 0.04 0.09 0000 --- --- --- --- 017145 00000 ------------ G 0.68 0.58 0.78 0.64 0.62 0.66 T 0.32 0.42 0.23 0.36 0.38 0.34 0000 --- --- --- --- 017460 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 017507 00000 ------------ C 0.89 1.00 0.75 0.93 0.98 0.91 T 0.11 0.00 0.25 0.07 0.02 0.09 0000 --- --- --- --- 017554 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 017565 00000 ------------ T 1.00 1.00 1.00 1.00 0.86 0.97 C 0.00 0.00 0.00 0.00 0.14 0.03 0000 --- --- --- --- 017576 00000 ------------ T 1.00 1.00 1.00 1.00 0.86 0.97 C 0.00 0.00 0.00 0.00 0.14 0.03 0000 --- --- --- --- 017594 00000 ------------ A 1.00 1.00 1.00 1.00 0.86 0.97 G 0.00 0.00 0.00 0.00 0.14 0.03 0000 --- --- --- --- 017988 00000 ------------ A 0.70 0.58 0.70 0.64 0.61 0.65 C 0.30 0.42 0.30 0.36 0.39 0.35 0000 --- --- --- --- 018030 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 018293 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 018786 00000 ------------ A 1.00 0.79 1.00 0.95 1.00 0.96 G 0.00 0.21 0.00 0.05 0.00 0.04 0000 --- --- --- --- 018941 00000 ------------ C 1.00 1.00 1.00 1.00 0.89 0.97 G 0.00 0.00 0.00 0.00 0.11 0.03 0000 --- --- --- --- 019009 00000 ------------ A 1.00 0.95 1.00 1.00 1.00 0.99 G 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 019064 00000 ------------ T 0.75 0.58 0.89 0.66 0.62 0.71 G 0.25 0.42 0.11 0.34 0.38 0.29 0000 --- --- --- --- 019080 00000 ------------ T 1.00 1.00 1.00 1.00 0.85 0.96 A 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 019145 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 019148 00000 ------------ C 0.80 0.92 0.59 0.86 0.96 0.82 T 0.20 0.08 0.41 0.14 0.04 0.18 0000 --- --- --- --- 019200 00000 ------------ A 0.53 0.50 0.48 0.52 0.58 0.53 G 0.47 0.50 0.52 0.48 0.42 0.47 0000 --- --- --- --- 019225 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 019346 00000 ------------ T 0.53 0.50 0.48 0.52 0.58 0.53 C 0.47 0.50 0.52 0.48 0.42 0.47 0000 --- --- --- --- 019371 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 019381 00000 ------------ C 0.83 0.92 0.77 0.89 0.96 0.87 A 0.17 0.08 0.23 0.11 0.04 0.13 0000 --- --- --- --- 019696 00000 ------------ C 0.50 0.46 0.52 0.57 0.58 0.54 T 0.50 0.54 0.48 0.43 0.42 0.46 0000 --- --- --- --- 020376 00000 ------------ C 0.89 1.00 0.78 0.93 0.94 0.90 T 0.11 0.00 0.22 0.07 0.06 0.10 0000 --- --- --- --- 020390 00000 ------------ G 0.96 0.95 1.00 0.95 0.92 0.96 A 0.04 0.05 0.00 0.05 0.08 0.04 0000 --- --- --- --- 020413 00000 ------------ C 1.00 1.00 1.00 1.00 0.85 0.97 G 0.00 0.00 0.00 0.00 0.15 0.03 0000 --- --- --- --- 020801 00000 ------------ A 1.00 0.79 1.00 0.95 1.00 0.96 G 0.00 0.21 0.00 0.05 0.00 0.04 0000 --- --- --- --- 020865 00000 ------------ G 1.00 0.83 1.00 0.95 1.00 0.97 T 0.00 0.17 0.00 0.05 0.00 0.03 0000 --- --- --- --- 020942 00000 ------------ G 0.97 0.83 1.00 1.00 1.00 0.97 A 0.03 0.17 0.00 0.00 0.00 0.03 0000 --- --- --- --- 020978 00000 ------------ A 0.50 0.25 0.61 0.59 0.77 0.58 C 0.50 0.75 0.39 0.41 0.23 0.42 0000 --- --- --- --- 021081 00000 ------------ A 1.00 0.79 1.00 0.95 1.00 0.96 G 0.00 0.21 0.00 0.05 0.00 0.04 0000 --- --- --- --- 021160 00000 ------------ C 0.77 0.75 0.95 0.68 0.54 0.73 T 0.23 0.25 0.05 0.32 0.46 0.27 0000 --- --- --- --- 021183 00000 ------------ A 0.90 0.92 1.00 1.00 1.00 0.97 G 0.10 0.08 0.00 0.00 0.00 0.03 0000 --- --- --- --- 021213 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 021333 00000 ------------ A 1.00 1.00 1.00 1.00 0.96 0.99 G 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 021334 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 021440 00000 ------------ C 1.00 0.82 1.00 1.00 1.00 0.98 A 0.00 0.18 0.00 0.00 0.00 0.02 0000 --- --- --- --- 021465 00000 ------------ G 0.86 0.91 0.94 0.68 0.72 0.80 C 0.14 0.09 0.06 0.32 0.28 0.20 0000 --- --- --- --- 021668 00000 ------------ T 0.87 0.79 0.91 0.80 0.65 0.79 A 0.13 0.21 0.09 0.20 0.35 0.21 0000 --- --- --- --- 021705 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 021725 00000 ------------ C 0.80 0.79 0.80 0.55 0.29 0.61 A 0.20 0.21 0.20 0.45 0.71 0.39 0000 --- --- --- --- 021809 00000 ------------ C 0.90 1.00 0.77 0.93 0.96 0.90 A 0.10 0.00 0.23 0.07 0.04 0.10 0000 --- --- --- --- 021922 00000 ------------ G 0.53 0.46 0.61 0.60 0.79 0.61 T 0.47 0.54 0.39 0.40 0.21 0.39 0000 --- --- --- --- 021963 00000 ------------ G 1.00 1.00 1.00 1.00 0.91 0.98 T 0.00 0.00 0.00 0.00 0.09 0.02 0000 --- --- --- --- 022937 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 022969 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 023089 00000 ------------ T 0.75 0.83 0.59 0.90 0.96 0.81 C 0.25 0.17 0.41 0.10 0.04 0.19 0000 --- --- --- --- 023169 00000 ------------ T 0.64 0.75 0.59 0.90 0.96 0.78 A 0.36 0.25 0.41 0.10 0.04 0.22 0000 --- --- --- --- 023180 00000 ------------ C 0.93 1.00 0.89 0.71 0.67 0.82 T 0.07 0.00 0.11 0.29 0.33 0.18 0000 --- --- --- --- 023364 00000 ------------ G 1.00 0.92 1.00 1.00 1.00 0.99 A 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 024175 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 025319 00000 ------------ T 1.00 1.00 1.00 1.00 0.83 0.96 C 0.00 0.00 0.00 0.00 0.17 0.04 0000 --- --- --- --- 025367 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 025446 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 026076 00000 ------------ A 1.00 1.00 1.00 1.00 0.86 0.97 G 0.00 0.00 0.00 0.00 0.14 0.03 0000 --- --- --- --- 026095 00000 ------------ C 0.79 0.75 0.83 0.97 0.95 0.88 T 0.21 0.25 0.17 0.03 0.05 0.12 0000 --- --- --- --- 026114 00000 ------------ A 0.89 1.00 0.95 0.97 1.00 0.97 G 0.11 0.00 0.05 0.03 0.00 0.03 0000 --- --- --- --- 026225 00000 ------------ C 0.65 0.88 0.73 0.62 0.62 0.69 T 0.35 0.12 0.27 0.38 0.38 0.31 0000 --- --- --- --- 026673 00000 ------------ G 1.00 1.00 1.00 1.00 0.85 0.96 A 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 026703 00000 ------------ - 0.71 0.88 0.70 0.64 0.48 0.66 + 0.29 0.12 0.30 0.36 0.52 0.34 0000 --- --- --- --- 026897 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 027082 00000 ------------ T 0.93 1.00 0.84 0.98 1.00 0.95 C 0.07 0.00 0.16 0.02 0.00 0.05 0000 --- --- --- --- 027247 00000 ------------ G 0.63 0.79 0.68 0.66 0.48 0.63 A 0.37 0.21 0.32 0.34 0.52 0.37 0000 --- --- --- --- 027379 00000 ------------ G 1.00 1.00 1.00 0.95 1.00 0.99 A 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 027409 00000 ------------ T 1.00 0.95 0.97 0.89 0.78 0.90 C 0.00 0.05 0.03 0.11 0.22 0.10 0000 --- --- --- --- 028248* 028278 00000 ------------ G 0.87 0.96 0.72 0.70 0.59 0.74 A 0.13 0.04 0.28 0.30 0.41 0.26 0000 --- --- --- --- 028887 01425 3' UTR G 0.87 0.96 0.93 0.89 0.79 0.88 A 0.13 0.04 0.07 0.11 0.21 0.12 0000 --- --- --- --- 028924 01462 3' UTR G 1.00 1.00 1.00 1.00 0.88 0.97 A 0.00 0.00 0.00 0.00 0.12 0.03 0000 --- --- --- --- 029201* 029764 00000 ------------ A 0.75 0.71 0.82 0.91 0.94 0.85 G 0.25 0.29 0.18 0.09 0.06 0.15 0000 --- --- --- --- 029917 00000 ------------ G 0.86 0.96 0.95 0.89 0.82 0.89 C 0.14 0.04 0.05 0.11 0.18 0.11 0000 --- --- --- --- 029974 00000 ------------ G 0.82 0.88 0.74 0.68 0.57 0.71 A 0.18 0.12 0.26 0.32 0.43 0.29 0000 --- --- --- --- 029992 00000 ------------ C 0.89 0.96 0.74 0.93 0.95 0.89 T 0.11 0.04 0.26 0.07 0.05 0.11 0000 --- --- --- --- 030078 00000 ------------ G 0.65 0.58 0.57 0.59 0.50 0.57 A 0.35 0.42 0.42 0.41 0.50 0.43 0000 --- --- --- --- 030222 00000 ------------ A 0.88 0.62 0.71 0.59 0.61 0.67 G 0.12 0.38 0.29 0.41 0.39 0.33 0000 --- --- --- --- 030333 00000 ------------ G 1.00 1.00 1.00 0.95 1.00 0.99 T 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 030473 00000 ------------ C 0.86 0.62 0.71 0.57 0.61 0.66 T 0.14 0.38 0.29 0.42 0.39 0.34 0000 --- --- --- --- 030474 00000 ------------ G 0.86 0.62 0.71 0.55 0.61 0.66 A 0.14 0.38 0.29 0.45 0.39 0.34 0000 --- --- --- --- 030477 00000 ------------ C 0.86 0.62 0.69 0.55 0.59 0.65 G 0.14 0.38 0.31 0.45 0.41 0.35 0000 --- --- --- --- 030669 00000 ------------ C 0.89 1.00 0.98 1.00 1.00 0.98 T 0.11 0.00 0.02 0.00 0.00 0.02 0000 --- --- --- --- 030778 00000 ------------ G 0.89 1.00 0.98 1.00 1.00 0.98 C 0.11 0.00 0.02 0.00 0.00 0.02 0000 --- --- --- --- 030823 00000 ------------ A 1.00 1.00 1.00 1.00 0.88 0.97 C 0.00 0.00 0.00 0.00 0.12 0.03 0000 --- --- --- --- 030896 00000 ------------ C 0.93 0.95 0.86 0.97 0.95 0.93 T 0.07 0.05 0.14 0.03 0.05 0.07 0000 --- --- --- --- 030998 00000 ------------ G 0.89 0.68 0.84 0.65 0.73 0.76 A 0.11 0.32 0.16 0.35 0.27 0.24 0000 --- --- --- --- 031062 00000 ------------ G 0.86 0.95 0.79 0.95 0.88 0.88 C 0.14 0.05 0.21 0.05 0.12 0.12 0000 --- --- --- --- 031114 00000 ------------ G 0.89 0.68 0.90 0.70 0.84 0.81 A 0.11 0.32 0.10 0.30 0.16 0.19 0000 --- --- --- --- 031266 00000 ------------ C 0.93 0.68 0.90 0.70 0.84 0.82 T 0.07 0.32 0.10 0.30 0.16 0.18 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002668: AT 010097: CAATTATATA 015975: C 016545: T 017017: T 017049: A 026703: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele3 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq 016963 A 0.00 0.00 0.00 0.00 0.02 0.01 G 1.00 1.00 1.00 1.00 0.83 0.96 T 0.00 0.00 0.00 0.00 0.15 0.04 028248 C 0.40 0.50 0.16 0.20 0.33 0.30 G 0.47 0.46 0.58 0.55 0.39 0.49 T 0.13 0.04 0.26 0.25 0.28 0.21 029201 01739 3' UTR C 0.88 0.95 0.82 0.89 0.98 0.90 G 0.00 0.05 0.14 0.09 0.02 0.07 T 0.12 0.00 0.05 0.02 0.00 0.03 0000 --- --- --- --- --- ---