Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq ED-freq ED-freq Total-freq Allele2 AD-freq AD-freq ED-freq ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000166 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000287 00000 ------------ C 1.00 1.00 0.97 1.00 1.00 0.99 T 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 000314 00000 ------------ C 0.87 1.00 1.00 1.00 0.96 0.97 T 0.13 0.00 0.00 0.00 0.04 0.03 0000 --- --- --- --- 000340 00000 ------------ T 1.00 1.00 0.97 0.98 1.00 0.99 C 0.00 0.00 0.03 0.02 0.00 0.01 0000 --- --- --- --- 000478 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000523 00000 ------------ - 0.17 0.29 0.33 0.23 0.12 0.22 + 0.83 0.71 0.68 0.77 0.88 0.78 0000 --- --- --- --- 000567 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000572 00000 ------------ C 0.83 0.71 0.60 0.66 0.69 0.69 A 0.17 0.29 0.40 0.34 0.31 0.31 0000 --- --- --- --- 000790 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000907 00000 ------------ C 1.00 1.00 0.98 0.95 1.00 0.98 T 0.00 0.00 0.02 0.05 0.00 0.02 0000 --- --- --- --- 000930 00000 ------------ - 0.90 0.96 1.00 1.00 1.00 0.98 + 0.10 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 000945 00000 ------------ T 1.00 1.00 1.00 1.00 0.96 0.99 G 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 000983 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000991 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 001043 00000 ------------ G 0.88 0.88 0.71 0.57 0.65 0.70 A 0.12 0.12 0.29 0.43 0.35 0.30 0000 --- --- --- --- 001080 00000 ------------ - 0.14 0.12 0.29 0.43 0.35 0.30 + 0.86 0.88 0.71 0.57 0.65 0.70 0000 --- --- --- --- 001450 00000 ------------ T 0.93 0.88 1.00 1.00 1.00 0.97 C 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 001698 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002779 00000 ------------ C 0.92 0.89 1.00 0.97 1.00 0.97 T 0.08 0.11 0.00 0.03 0.00 0.03 0000 --- --- --- --- 002791 00000 ------------ A 0.88 1.00 1.00 1.00 0.86 0.94 G 0.12 0.00 0.00 0.00 0.14 0.06 0000 --- --- --- --- 003017 00000 ------------ C 1.00 0.94 1.00 1.00 1.00 0.99 A 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 003155 00000 ------------ C 0.83 0.78 0.71 0.68 0.65 0.71 T 0.17 0.22 0.29 0.32 0.35 0.29 0000 --- --- --- --- 003213 00000 ------------ T 1.00 1.00 1.00 0.86 1.00 0.96 G 0.00 0.00 0.00 0.14 0.00 0.04 0000 --- --- --- --- 003561 00264 SYNON G 0.85 0.78 0.62 0.76 0.88 0.78 A 0.15 0.22 0.38 0.24 0.12 0.22 0088 GCG GCA ALA(A) ALA(A) 003581 00284 NON-SYN C 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0095 GCG GAG ALA(A) GLU(E) 003588 00291 SYNON G 1.00 1.00 0.97 1.00 1.00 0.99 T 0.00 0.00 0.03 0.00 0.00 0.01 0097 GCG GCT ALA(A) ALA(A) 003641 00344 NON-SYN C 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0115 CCG CAG PRO(P) GLN(Q) 003684 00387 SYNON C 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0129 GCC GCA ALA(A) ALA(A) 003869 00572 NON-SYN C 0.81 0.78 0.76 0.57 0.69 0.70 T 0.19 0.22 0.24 0.43 0.31 0.30 0191 GCG GTG ALA(A) VAL(V) 004004 00000 ------------ C 1.00 1.00 0.97 1.00 1.00 0.99 G 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 004201 00000 ------------ - 0.14 0.00 0.00 0.00 0.02 0.03 + 0.86 1.00 1.00 1.00 0.98 0.97 0000 --- --- --- --- 004472 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 004693 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 004984 00000 ------------ G 1.00 1.00 1.00 1.00 0.93 0.98 A 0.00 0.00 0.00 0.00 0.07 0.02 0000 --- --- --- --- 005047 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 005109 00732 SYNON G 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0244 GGG GGC GLY(G) GLY(G) 005395 00000 ------------ G 1.00 0.94 1.00 1.00 1.00 0.99 T 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 005412 00000 ------------ A 1.00 1.00 1.00 1.00 0.84 0.96 G 0.00 0.00 0.00 0.00 0.16 0.04 0000 --- --- --- --- 005442 00000 ------------ C 0.88 0.94 0.62 0.82 0.93 0.83 A 0.12 0.06 0.38 0.17 0.07 0.17 0000 --- --- --- --- 005525 00897 SYNON C 1.00 1.00 1.00 0.97 1.00 0.99 T 0.00 0.00 0.00 0.03 0.00 0.01 0299 TCC TCT SER(S) SER(S) 005641 00000 ------------ C 0.87 0.82 0.67 0.70 0.80 0.76 T 0.13 0.18 0.33 0.30 0.20 0.24 0000 --- --- --- --- 005664 00000 ------------ A 1.00 0.91 1.00 1.00 1.00 0.99 G 0.00 0.09 0.00 0.00 0.00 0.01 0000 --- --- --- --- 005772 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 005888 00000 ------------ - 0.07 0.14 0.00 0.00 0.00 0.03 + 0.93 0.86 1.00 1.00 1.00 0.97 0000 --- --- --- --- 006419 00000 ------------ T 0.87 0.95 1.00 1.00 0.93 0.96 A 0.13 0.05 0.00 0.00 0.07 0.04 0000 --- --- --- --- 006764 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 006790 00000 ------------ - 0.87 0.96 1.00 1.00 0.96 0.96 + 0.13 0.04 0.00 0.00 0.04 0.04 0000 --- --- --- --- 007206 00000 ------------ A 1.00 1.00 1.00 0.82 0.98 0.95 C 0.00 0.00 0.00 0.18 0.02 0.05 0000 --- --- --- --- 007301 01046 NON-SYN A 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0349 GAG GGG GLU(E) GLY(G) 007683 00000 ------------ G 0.93 0.88 1.00 1.00 1.00 0.97 T 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 007801 00000 ------------ C 1.00 1.00 1.00 1.00 0.96 0.99 T 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 007833 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 008251 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 008308 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 008572 00000 ------------ C 0.90 0.79 1.00 1.00 1.00 0.96 A 0.10 0.21 0.00 0.00 0.00 0.04 0000 --- --- --- --- 008577 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 008620 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 008641 00000 ------------ G 0.97 1.00 0.82 0.59 1.00 0.85 A 0.03 0.00 0.18 0.41 0.00 0.15 0000 --- --- --- --- 008735 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 008952 00000 ------------ - 0.00 0.00 0.02 0.00 0.00 0.01 + 1.00 1.00 0.98 1.00 1.00 0.99 0000 --- --- --- --- 009225 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 009369 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 009372 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 C 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009478 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 009589 00000 ------------ G 1.00 1.00 1.00 0.98 0.85 0.96 A 0.00 0.00 0.00 0.02 0.15 0.04 0000 --- --- --- --- 009769 00000 ------------ G 0.93 0.88 1.00 1.00 1.00 0.97 C 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 010101 00000 ------------ C 0.88 0.89 1.00 0.98 1.00 0.97 T 0.12 0.11 0.00 0.02 0.00 0.03 0000 --- --- --- --- 010245 01361 NON-SYN C 0.85 0.83 1.00 0.98 1.00 0.95 T 0.15 0.17 0.00 0.02 0.00 0.05 0454 GCG GTG ALA(A) VAL(V) 010402 00000 ------------ G 0.88 0.94 1.00 0.98 1.00 0.97 A 0.12 0.06 0.00 0.02 0.00 0.03 0000 --- --- --- --- 010415 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 010529 00000 ------------ C 0.85 0.89 1.00 0.98 1.00 0.96 T 0.15 0.11 0.00 0.02 0.00 0.04 0000 --- --- --- --- 010550 00000 ------------ T 1.00 0.94 1.00 1.00 1.00 0.99 C 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010671 00000 ------------ - 0.90 0.94 0.98 0.98 1.00 0.97 + 0.10 0.06 0.02 0.02 0.00 0.03 0000 --- --- --- --- 010683 00000 ------------ A 1.00 0.88 1.00 1.00 1.00 0.99 G 0.00 0.12 0.00 0.00 0.00 0.01 0000 --- --- --- --- 011138 01683 SYNON C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0561 GAC GAT ASP(D) ASP(D) 011212 01757 3' UTR T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 011308 01853 3' UTR A 0.87 0.86 1.00 0.98 1.00 0.96 C 0.13 0.14 0.00 0.02 0.00 0.04 0000 --- --- --- --- 011366 01911 3' UTR T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 011376 00000 ------------ - 1.00 1.00 1.00 1.00 0.98 0.99 + 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 011382 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 011578 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 011842 00000 ------------ A 0.86 1.00 1.00 1.00 0.93 0.96 C 0.14 0.00 0.00 0.00 0.07 0.04 0000 --- --- --- --- 011862 00000 ------------ T 1.00 1.00 1.00 0.97 1.00 0.99 C 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 012285 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 012611 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 012874 00000 ------------ G 0.96 0.88 1.00 0.98 1.00 0.97 A 0.04 0.12 0.00 0.02 0.00 0.03 0000 --- --- --- --- 012975 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 013198 00000 ------------ G 0.96 0.96 1.00 1.00 1.00 0.99 T 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013211 00000 ------------ - 0.04 0.00 0.00 0.00 0.00 0.01 + 0.96 1.00 1.00 1.00 1.00 0.99 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000523: T 000930: G 001080: AAG 004201: ACT 005888: G 006790: T 008952: GACT 010671: G 011376: A 013211: GTC