MMP13 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
TTTTAGCCTT CATTTCATTT CCATAGACAC TAGCATGGTA TCCTATATGG
50
TTGATGCTCA ATTAATATAT TCATTAAATT GATAGATAAA AAAGCTTCTT
100
TTCTTCTAGT TTGAAGTAGT AACATTTCTA CAAATA
T
GTG AAAATCTATA
150 |
var(137):[C:0.01]
AGAACAGTTA GCCTATTTGA TTCTTTTTCT CCACTTTCAA ATGTTTAATA
200
AAATGTTATT TGTTTTCCAG CTTCTTAAGC ACTTCTTATC T
A
ATGAGATT
250 |
var(242):[G:0.01]
TTAATATATT ATGAAAATTT ATTTGTAAAA ACAAATGCTT TCTAATAAAC
300
TAACTTTTAT AAGCTTAGTC GATGAATCAA ACTTTTTTGG ATAATTTTTC
350
ACTTAATCTC AAAATTAAAT
A
TTATGATAC ATGGAAGCAA CTTAAAATAA
400 |
var(371):[G:0.11]
ATTATTGCTT TGCATTCCTG ATTGAGCACC AATCTAATCT TGAACTCACT
450
GGAAACAATC TATTTGAAAG GGTATATTTG GCTGTATTTT GTTTGGATAA
500
AGGCATATAG TAAATTTCCC TCAAATGATC ACATACATGT TGTAGGCTTT
550
TCTGATTTTT CTCTAAGGCA CTGGCTACTC TAGATTATAG GATTTTACTC
600
ATATGTTAGG ATACCCATTT CGTACTCACC CTAAAGCTGT AT
T
CATGCTC
650 |
var(643):[A:0.35]
CTTCTCTTTG TCTTACTATG TTCCTGACCT
G
AGCAGCATT TTCTTTCTGA
700 |
var(681):[A:0.02]
CTCTTAGTCA CTCAAATTAA CCTGCATTTC CAATCATTTA TTTAAAGAAG
750
TCCAATAAAT CCAAAGATCA TGGCCTATAT TGCTCTACCC ATTTACTTCT
800
GCAGGGGACC AAAGATGGCA CTTTGATTTC ACGGTACTGA ATGTGTGATG
850
TTCTGAAAGG AATAATAGGG TAGAGGCC
C
C TAGGACTATT TTCCTGATGG
900 |
var(879):[T:0.03]
TTGGACCAAG ATTACTTCTA TTATTCAAAC TTAAAAATTG AGAAACTTGA
950
AATTGGCCTA CTGCAGCCCT AGTTTTCTTG GGCACTCCCT GAGGTGTAGG
1000
AACCAAACAG CTCAGCTTTT AAGAAAATAT CTGAGAATGG AAAGGGTGGA
1050
GGTCATAATT AGACAGGGAC G
G
T
G
G
T
C
A
A
G
A
A
C
A
T
T
G
A
G
T
T
T
T
G
A
G
T
T
A
T
1100 |
REPEAT
T
G
G
C
C
T
A
G
G
T
T
C
A
A
A
T
C
C
T
G
G
T
A
T
C
A
T
T
T
A
T
A
A
A
C
T
A
T
A
T
G
A
C
C
G
T
A
T
A
C
1150 |
var(1145):[A:0.01]
A
A
G
T
A
T
T
T
A
A
C
T
T
C
T
C
A
G
T
G
T
A
T
C
A
G
A
T
T
A
T
T
C
A
T
A
T
G
T
A
A
A
A
T
G
G
A
A
A
A
1200
C
A
A
G
C
T
T
T
C
T
G
A
C
A
G
C
A
C
C
T
A
T
G
T
G
G
C
T
G
T
T
G
T
A
A
G
G
A
T
T
A
A
A
T
G
A
G
A
T
A
1250
A
T
G
C
C
T
T
T
T
A
A
A
C
C
T
A
G
A
A
T
G
C
A
G
T
AATCC CTGTTTGTGC TAGCCATTAC
1300
AGTTGTTCCG TTCCAATGTA ATTCTTCTAC CTCTGTCTGA ATCTGTAGGG
1350
AATTTATGCA GGACTCCATA TTTGTCGAGA GGTCATGCCA GTGTGTTTAA
1400
ATTCCAACCA TGGGGCTCAA TCCTGCGGTT GTGCCGTAGC ACCTCCAAGT
1450
CATCAAGCTT GGTTTTGGTC CAATATCGTG AACTTCAGGT AGACACAAGA
1500
CATCTCTCTG TAG
A
TATTCT AGAGAA
A
A
TG CAGTTTATAA TTTACCAG
G
C
1550 |
var(1514):[T:0.39]
|
var(1527):[:0.28]
|
var(1549):[:0.61]
AGTAGTAAAC ATTCTAGAAT CAGTACTAAG TTTCTCTTTA TGGAAGTAAA
1600
CATGCCATCT TGATACACTT ATTATTCGAA GAAGCAAAAG TAGATACGTT
1650
CTTACAGAAG GCAAAAAAAA AAAATTTTTG CTAAGTGAAG TAAAAAATGT
1700
ACTACTCTCT GCTTCTTCCC ACAGTATCCA TAAATATGCT GAGGCCGTTT
1750
ATTTTGCCAG ATGGGTTTTG AGACCCTGCT GAAACAAGAG ATGCTCTC
A
T
1800 |
var(1799):[G:0.02]
TTATATTTCC CTCAAATTCT ACCACAAACC ACACTCGGGA GGGAAAAGAA
1850
AAAGTCGCCA CGTAAGCATG TTTACCTTCA AGTGACT
A
GG AAGTGGAAAC
1900 |
var(1888):[G:0.30]
CTATCCATAA GTGATGACTC ACCATTGCAG GCCTATAAAA GTAAAGGTAA
1950
TCTCTGCGGA AAGA
C
A
A
C
A
G
T
C
C
C
C
A
G
G
C
A
T
C
A
C
C
A
T
T
C
A
A
G
A
T
G
C
A
T
C
C
2000 | Exon 1 |
UTR
M H P 3
A
G
G
G
G
T
C
C
T
G
G
C
T
G
C
C
T
T
C
C
T
C
T
T
C
T
T
G
A
G
C
T
G
G
A
C
T
C
A
T
T
G
T
C
G
G
G
C
C
C
2050
G V L A A F L F L S W T H C R A 19
T
G
C
C
C
C
T
T
C
C
C
A
G
T
G
G
T
G
G
T
G
A
T
G
A
A
G
A
T
G
A
T
T
T
G
T
C
T
G
A
G
G
A
A
G
A
C
C
T
C
2100
L P L P S G G D E D D L S E E D L 36
C
A
G
T
T
T
G
C
A
G
A
G
GTAGAGTA TCTTGCCAAT CCTGATGATG CGGTTGGTAC
2150
Q F A E 40
ATCTCAGAAA TGTCCTTCTC TTTTAAACGC AGTTCATTTT GGTGTCTTTT
2200
CTAG
C
G
C
T
A
C
C
T
G
A
G
A
T
C
A
T
A
C
T
A
C
C
A
T
C
C
T
A
C
A
A
A
T
C
T
C
G
C
G
G
G
A
A
T
C
C
2250 | Exon 2 |
var(2219):[G:0.01]
R Y L R S Y Y H P T N L A G I 55
T
G
A
A
G
G
A
G
A
A
T
G
C
A
G
C
A
A
G
C
T
C
C
A
T
G
A
C
T
G
A
G
A
G
G
C
T
C
C
G
A
G
A
A
A
T
G
C
A
G
2300
L K E N A A S S M T E R L R E M Q 72
T
C
T
T
T
C
T
T
C
G
G
C
T
T
A
G
A
G
G
T
G
A
C
T
G
G
C
A
A
A
C
T
T
G
A
C
G
A
T
A
A
C
A
C
C
T
T
A
G
A
2350
S F F G L E V T G K L D D N T L D 89
T
G
T
C
A
T
G
A
A
A
A
A
G
C
C
A
A
G
A
T
G
C
G
G
G
G
T
T
C
C
T
G
A
T
G
T
G
G
G
T
G
A
A
T
A
C
A
A
T
G
2400
V M K K P R C G V P D V G E Y N 105
T
T
T
T
C
C
C
T
C
G
A
A
C
T
C
T
T
A
A
A
T
G
G
T
C
C
A
A
A
A
T
G
A
A
T
T
T
A
A
C
C
T
A
C
A
G
GTAA
2450
V F P R T L K W S K M N L T Y R 121
ATCATAGGCT ATCTTTCTTT CATATTTGTT AGCCTTTTCT TGTAGTATTA
2500
AATGTCTAAT ATTAAGTAGG CCTTATTATT TAATTGGCAG TTAAATTCCA
2550
GAATAGCTTT AATATGGTTG CCGAGAATAC CTCATA
A
CAT CTATTATTGT
2600 |
var(2587):[G:0.01]
TACATTAACT CAGCATTATT TTTTAGTGGG
C
ATCTCAAAG TATTTCTTTT
2650 |
var(2631):[A:0.01]
AGAGATGAAA TCAAAAGAGA AATAAAAGTA GGTTAAAGAA AATTTGCAAA
2700
CATAGTACAT TAGGTGTATT TATTACAACA GTGCTCAAGA TGAAGAGTTC
2750
CACTCTTTCT AGAAACTTTA CAGAGCTATT TCATTTATTT G
G
GCTTTATC
2800 |
var(2792):[A:0.32]
AATGTAATCT AAACTTTTAG CATGCAAAAT AAATTATATT AAACATTGGA
2850
ATATTTTAAA TTTAAGATGC CACATGGTCA GATATTTGGA GATACTCAAA
2900
TGTGGCTGAA TTTTTGACTT TTTATTCTTG TATGGCATCA TAATTAATAC
2950
ATTATTTGAA ACAATAAACC TCTAGTAGAA
C
TTTCAAAGA AATTATTGCA
3000 |
var(2981):[T:0.01]
TTTTGAATT
G
AAAAGCAATA TACCAAGAAA ATGTATTCTA AAATAGCTGT
3050 |
var(3010):[A:0.02]
CACTTTCCAA AAAGTTCATT GAAACTTTCT CTGTTAAATA G
A
A
T
T
G
T
G
A
A
3100 | Exon 3
I V N 124
T
T
A
C
A
C
C
C
C
T
G
A
T
A
T
G
A
C
T
C
A
T
T
C
T
G
A
A
G
T
C
G
A
A
A
A
G
G
C
A
T
T
C
A
A
A
A
A
A
G
3150
Y T P D M T H S E V E K A F K K 140
C
C
T
T
C
A
A
A
G
T
T
T
G
G
T
C
C
G
A
T
G
T
A
A
C
T
C
C
T
C
T
G
A
A
T
T
T
T
A
C
C
A
G
A
C
T
T
C
A
C
3200 |
var(3167):[T:0.01]
A F K V W S D V T P L N F T R L H 157
G
A
T
G
G
C
A
T
T
G
C
T
G
A
C
A
T
C
A
T
G
A
T
C
T
C
T
T
T
T
G
G
A
A
T
T
A
A
G
G
GTAATGATGC
3250
D G I A D I M I S F G I K 170
ACATTTATTT TACAAACATT TTTATATTCT AATTCTTGGT TCCATTTTAA
3300
AATTATTTAT TTCAGTCATT CATTACTTTT TAAAG
C
ATTC AACACTAATT
3350 |
var(3336):[A:0.30]
TACCAAACAC CTGTGCTAAG TACTCCTGGA TGTGATAAGA CTCCTAACCC
3400
TTGCTTTTGT GTGTAG
A
G
C
A
T
G
G
C
G
A
C
T
T
C
T
A
C
C
C
A
T
T
T
G
A
T
G
G
G
C
C
C
T
C
3450 | Exon 4
E H G D F Y P F D G P S 182
T
G
G
C
C
T
G
C
T
G
G
C
T
C
A
T
G
C
T
T
T
T
C
C
T
C
C
T
G
G
G
C
C
A
A
A
T
T
A
T
G
G
A
G
G
A
G
A
T
G
3500
G L L A H A F P P G P N Y G G D 198
C
C
C
A
T
T
T
T
G
A
T
G
A
T
G
A
T
G
A
A
A
C
C
T
G
G
A
C
A
A
G
T
A
G
T
T
C
C
A
A
A
G
GTAATGTT
3550
A H F D D D E T W T S S S K 212
TCTTATAAAG ATATCATTTA TGTGTTATTA GATTAGACAG TGAACACACT
3600
G
GTATGAAGT TAAAACACAT AAAAGTTAAA TATATTTGGT ATTTGACTAT
3650 |
var(3601):[A:0.31]
ATTTTCTTAA ATAAAGTTTA TCTTAGATGT ATTAGTGTCT CTACAAGTGA
3700
CATTTCTACA AATTGATATC AACATTAAAA AATGAACAAA ATCTACTTAA
3750
TCTGTCACTG TGGCTTGAGG GATACTAATG AACTTTGAAG TAGGACCAAA
3800
ATGTTTATGT CTGTCAGCCA ACATGTTATT ACTGCAAATT ACCTTTTGGC
3850
ATGTTGAGGA AGTACAGTTT ATTAGAAATA TCTAACTAAA AACTACCAGG
3900
GCTGGATCTA TGGGTCATAC ATGAATTAGA TGTGAATTGA AATAGTTTTT
3950
TGCTTGGTAG AAATATGTTC AATCAAATTT CTGTTTCCCA TTATATGAGT
4000
TGCTTGATTC AGTCTTGTCT
A
TATATTGTA AACACTATTC TTAAAAACCT
4050 |
var(4021):[G:0.08]
AGACAGACTC TTACTCCAAA CAGCATGAAA CAGACAAGAT GATGGTTGTA
4100
TTTACAAGAG CAAAATGAAA CTGAATGTTG AATGAGATCA GTTAGTAGTT
4150
AAATCTTCAA GTCTCAAAAT AATTGGGAAT GTTAACTTAG GAAGAAAAGC
4200
CATAGATTGT TCTAACTAGG ACTTAGTTAT GACAAGTAGA TGTTGTCTTC
4250
ATAGACAGCT GAGTTTTATT TTTCATTTAA ATAAAAAAGA TTATTTCTCC
4300
AAAGAATAAA ACTGGGCCTT ACATGATCAG TGTCTCAAAT CTAATACCTC
4350
CAATCTGTCT ATGGAG
A
GAA AAGTGAAAAT TTACATATTT ATGTTCTGGG
4400 |
var(4367):[G:0.12]
TATTTCACAG GTAAGAATGG TTTCAGGAAG AAGAAATAAT ATCCAGCATT
4450
GTTAAGGTAG AATCACAGTA AGCCTCAAAT TTAGGTTCCT TTATAAATTC
4500
TGGGTTTGAA ATATTTAATT GAAGTGAATA AAAACATCCA CAAACAAGTC
4550
TGGATTCATT TTTCAGTGGA AGGCCAAGAG GGGTATCCAT TACTAGTCAT
4600
TCA
A
TGAAGA ATTAGTTAAC ACTCAGATTA TGTGACCTCT AATTGCTCTC
4650 |
var(4604):[G:0.04]
ATGGTCTGCA AGGTTTGCTA GGATGGTTCA TTTTCTTCAT G
C
ACAGGCTA
4700 |
var(4692):[G:0.01]
CAATAGCAGA GGGTATTTAA GGTCAAATGG AATCCACTGG CTCTAGTTTT
4750
CAGGTAATCT AAGCACAGGT AACAACAATC CTATTGCCTT GCAC
G
TCTTA
4800 |
var(4795):[T:0.04]
TTTTTCTTT
T
AGTTTTTTAT TTTCTTTTTT CCAGTTT
G
AA ATACCTGCAT
4850 |
var(4810):[C:0.01]
|
var(4838):[C:0.01]
TAGGAGGCTC AAAATTGGCA GACAGAATGC TTAGAGGGAA CAATGTAAAT
4900
ACAGTGACAT AGTAGTCTTC TAGAGTAGAG AAAAGATGGC TAATCATGTC
4950
TAGAGTTTCT GTTTCTCCAG AACCCAGAGT CTAGAGACAT TCTGGAAAAA
5000
ATCATTTGGT TGGAATTTGC TCCCAAGAGT AAACACAGAG AACCTATTTA
5050
GTGCATCCTC CA
T
CCTTGGT ACCATCCCTT TGGATGCTGC CTCCTGATTG
5100 |
var(5063):[C:0.01]
GAGGATGTTC TGGGCAGCAC CCTAGCTAGG TACCACCCTA TGTGATTTCC
5150
CCACTCCT
C
G TTTAAGGTAA TCTCTGTCCA CTTCCCTCAC CTGACCTGAG
5200 |
var(5159):[T:0.01]
AATACTAAGC GCAAATCAGG AGTTCTAATG TATTCACAGT AAATCCTTAT
5250
TAATTACTAA TTACATGAGA GTAATCTGTT GACATTCTAA TTGTGTAGGC
5300
AGCTATAATC AAAAGAACAC TAAATTATTT ATAAGGATTA AATCAATACT
5350
TTGAATCTTC CTTCAAGCAA CTGAATATTG ATTTTAAAAA GTAGGAGACT
5400
GAAGAAAGAG AAAAGAAAGT ATATAGCCAA GAAAGAAACA TACCAGATAG
5450
ATAAAATGAT ATTCCTTTCA TTACCTGGTC ACTGGAATTC CTTTTTTTCT
5500
CATTGTTTCT TTGTTTTCTT ACAG
G
C
T
A
C
A
A
C
T
T
G
T
T
T
C
T
T
G
T
T
G
C
T
G
C
G
5550 | Exon 5
G Y N L F L V A A 221
C
A
T
G
A
G
T
T
C
G
G
C
C
A
C
T
C
C
T
T
A
G
G
T
C
T
T
G
A
C
C
A
C
T
C
C
A
A
G
G
A
C
C
C
T
G
G
A
G
C
5600
H E F G H S L G L D H S K D P G A 238
A
C
T
C
A
T
G
T
T
T
C
C
T
A
T
C
T
A
C
A
C
C
T
A
C
A
C
C
G
G
C
A
A
A
A
G
C
C
A
C
T
T
T
A
T
G
C
T
T
C
5650
L M F P I Y T Y T G K S H F M L 254
C
T
G
A
T
G
A
C
G
A
T
G
T
A
C
A
A
G
G
G
A
T
C
C
A
G
T
C
T
C
T
C
T
A
T
G
GTAA CTC
G
GTTATA
5700 |
var(5694):[A:0.12]
P D D D V Q G I Q S L Y 266
GAAATAGAAT ATGAT
C
AGTT ATAAAAGCAG AAGAAACCCA TGCATTTATT
5750 |
var(5716):[A:0.01]
TTCTAAATTG
C
A
G
T
C
A
T
G
C
T
G
C
A
T
A
A
T
A
A
T
G
T
T
T
T
G
G
T
A
C
A
G
T
G
A
A
G
C
G
C
5800 |
REPEAT
|
var(5778):[G:0.12]
A
T
G
C
A
T
G
A
C
A
A
A
G
G
T
T
T
C
A
T
A
A
T
A
C
T
G
T
A
A
T
A
C
A
G
T
A
T
T
T
T
T
A
A
T
G
T
A
C
C
5850
T
T
T
C
T
T
A
T
A
T
T
T
A
G
A
T
A
C
A
C
T
T
A
A
T
A
C
T
C
A
C
C
A
T
T
G
T
G
T
T
A
C
A
T
G
T
G
C
C
T
5900
G
C
A
G
T
A
C
T
C
A
G
A
A
C
A
G
T
A
A
T
A
T
G
C
T
G
G
A
C
A
G
G
T
T
T
C
T
A
G
C
C
T
A
G
G
A
G
A
C
A
5950
T
G
G
G
C
T
G
T
T
C
C
A
T
A
T
A
G
C
C
T
A
T
A
T
C
T
G
T
A
G
T
A
G
G
T
T
A
T
A
T
A
T
C
T
A
G
G
T
T
T
6000
G
T
G
T
A
A
G
T
A
C
A
C
G
C
T
A
C
A
A
T
A
T
T
C
A
C
C
C
A
A
T
G
A
C
A
A
A
A
T
C
T
C
C
T
A
A
C
A
A
C
6050
A
C
A
T
T
T
T
T
C
A
G
A
A
T
G
T
A
T
C
C
C
T
G
T
T
G
T
T
A
A
G
C
A
A
C
A
C
A
T
G
A
C
T
CTACTAA
6100
TTGAATTCAC CACTGCCAAT GCTGCTTTCT TGGTTTTGTT GTTAAAACCT
6150
AGGAAAACAT ACCCATTTTT TCTTTCCAAA TCTAACTACC CACTCAAATA
6200
GAAAAGATTT CATTCTCCAA ATTTTTGCAG ACTATAACTC CTCGTATTTG
6250
TACTTTA
T
AC ATTGCAATGT G
C
A
T
T
T
G
A
T
A
T
C
C
T
C
C
A
A
A
C
A
C
C
T
C
T
G
C
A
A
6300 |
var(6258):[C:0.08]
|
REPEAT
T
A
A
G
A
A
A
G
A
A
A
A
A
T
A
T
T
T
T
G
T
T
C
C
C
C
A
T
T
T
A
A
C
C
A
A
T
G
A
A
G
A
A
A
C
A
A
A
G
C
6350
C
C
T
G
T
A
G
A
G
T
T
T
A
A
G
T
A
G
C
A
T
A
C
C
T
A
T
A
G
T
A
A
C
A
A
G
G
T
T
G
G
T
G
G
T
G
A
A
A
G
6400
T
G
A
G
A
T
C
C
T
A
A
GGCTTTTAG AAATTCCAAG TACTCTTTCA ACCAGTCCAA
6450
TCTGGCACAG TAGAAACCTC TCAAGTGGCC TGTGGTAGTT TTTAATCAAC
6500
ATCTACAGTA ACCATTGTAA AAAAAAAATT CTTCCTTTTC ACTTC
C
CCCC
6550 |
var(6546):[G:0.01]
C
CAAGTTTTC AATAATATTT ACAAAATTAT TAAACTTCAA CCCAAGTATT
6600 |
var(6551):[T:0.01]
TATTTATAGA TGACCTGTTA TAGAGTTAAA GCCACAGTAC ACAGTCATCA
6650
GTGTAAACAC TTCTAGAGCA CATAGCTCAG AAAACTTGCT CATAGCATCC
6700
AA
C
CCATTCT TTTACCCTCT AGATTTCAAT CTATCACAGT AGCTAGCATA
6750 |
var(6703):[T:0.01]
GCCATGGGCA TGAACTTG
A
A GATGGCAAAG GGAATTTGCA AATTTATTTT
6800 |
var(6769):[G:0.01]
GCAATTATTA TTTCTACATT GTTATGACTC AGGGACTGAT GAAAGAACTA
6850
ATAAAAACTA GACAGAAAGA AAAACAGTGT AGGATTATTA TTATTATATA
6900
CTGCACCCCC ATCCTGTCTG CACTCATGG
G
AGACGGTTGG AAATTTACCA
6950 |
var(6930):[A:0.01]
ACATGTCGCA AGTCACATAA GTGCTGAAGG CCTGGTTTGT CACAGCTGAG
7000
ATA
C
AGCTGC ACCATGGCAA AC
T
GGTGAAG CAACATTAGC TGATGTTGAC
7050 |
var(7004):[T:0.01]
|
var(7023):[C:0.08]
AGCTGGTAAA ATAGTCAAGA GGAGGAGGCA AGATGAGGGC TTTTGCAGGA
7100
AAAATAC
G
CC ATCAAAAATG GCTTTAAGGG GAATCTAGTT TTCAAGAGCA
7150 |
var(7108):[A:0.01]
ATCTGTCAAT AGATTGTGCA AGGTGTAGGG AAAATTTCTC AAATTCTGTT
7200
GCTTTTTTCC CTCCTTTTTA TCATCAACCT CAAGAAACCT AAGTTTATAC
7250
TTCTAAAGAA TCTCGAGAGG TCTTGAAGGA TGGAAGTGGA GGGGAGGAAG
7300
GAAGTAAGAT TACACGGTAC TTGCACCATG ATGTAGGAGC CCCAGGACCT
7350
A
CAGCTTTTC CTGGAGAAAC CCTCTCCCAC TGTCCAT
C
AG CAGATCAGCC
7400 |
var(7351):[G:0.01]
|
var(7388):[T:0.01]
TGTTGTACTG TGACTCAGGT TATCAGTAAT GTCACACTCA TAACTTCTCT
7450
CTTGCCTTTC A
C
GACTACAG
G
T
C
C
A
G
G
A
G
A
T
G
A
A
G
A
C
C
C
C
A
A
C
C
C
T
A
A
A
C
7500 |
var(7462):[T:0.02]
| Exon 6
G P G D E D P N P K 276
A
T
C
C
A
A
A
A
A
C
G
C
C
A
G
A
C
A
A
A
T
G
T
G
A
C
C
C
T
T
C
C
T
T
A
T
C
C
C
T
T
G
A
T
G
C
C
A
T
T
7550
H P K T P D K C D P S L S L D A I 293
A
C
C
A
G
T
C
T
C
C
G
A
G
G
A
G
A
A
A
C
A
A
T
G
A
T
C
T
T
T
A
A
A
G
A
C
A
G
GT ACTCTTGAGA
7600
T S L R G E T M I F K D R 306
TTCTTTCATA AAGTCTGTAT GCGACAAACA TCTGTGAAGC TGCTTCTGCA
7650
TATTGCCAAA ACATCCTGTC AGACTTCCAA AGGCGAAGTT AGCAGTAAAA
7700
ATGGGCAGGC AGTTTATTTA CATATTTCAG ATCAAATAAA TGACTGATGG
7750
ATAAATGTTT TACTTTTCAA
C
G
TATAACCT TGACATTGTG TAGCTTCCTT
7800 |
var(7771):[T:0.01]
|
var(7772):[A:0.11]
TTACATCTCT AGTTACAGTC TTTCTTATAA ATATAACCAA GAAAATCTAG
7850
AAATCCCATT TGTTTTAAAA ACAGACAAGC ATTGAAAGTA AC
T
GCTGTAT
7900 |
var(7893):[G:0.01]
TAATAAATGG TTACTC
G
TTA GGCCCACA
C
G GATTCGTTTT GGTATGGAAA
7950 |
var(7917):[A:0.03]
|
var(7929):[T:0.02]
GACTTTGATT CTAGATACAT GTTGGAATTT GAGGGATGAA ATGAAATGAA
8000
CCCAGAAATG CAATATAAAA TTTTAATTTC TACACTGTTC CAGTATGCTT
8050
GTTTATTCAT TCATTCATTG ATCCCTCATC TGTGATCCAA TAGCATGTTT
8100
ATCCCCTCTG TTATAACTCT AATTACATTG TACTCGTGGG GCGGGGGGTG
8150
TTTCTCATGT ATGTTTTCCC AGGCCATGAG ACCATGGAAG ACATAGTTCA
8200
TATAACTCAT ATCTTCTCTC TGGAGGCCAA CACAA
T
GCCT GGCACATTTG
8250 |
var(8236):[G:0.01]
CTTGCCCCTG GCAAGATACC CAAAATTGAG CAAGACTGTT TCAACCTGCA
8300
AAGAACTCAG AGACCTCACA CAGGCTCTGT GAGATTTCAA AGTTGAATAC
8350
CTTACGCTAG TTAGGATAGC ACAACTTGTC ACTGGCGCTT AAAGGGTAAT
8400
GGAATTTTTT TTCCCTTCAC AGGTGGGAGG TATTGGTTGT ATCTAACTTG
8450
TCTGTGTTGA TGTGGAGAGA GGTGACTAGC AGGATAGAAA TATTGCATTT
8500
AAAAATGTGA CAGAAAACTC CATTTTACTT TTGTGTTAG
A
T
T
C
T
T
C
T
G
G
C
8550 | Exon 7
F F W 309
G
C
C
T
G
C
A
T
C
C
T
C
A
G
C
A
G
G
T
T
G
A
T
G
C
G
G
A
G
C
T
G
T
T
T
T
T
A
A
C
G
A
A
A
T
C
A
T
T
T
8600
R L H P Q Q V D A E L F L T K S F 326
T
G
G
C
C
A
G
A
A
C
T
T
C
C
C
A
A
C
C
G
T
A
T
T
G
A
T
G
C
T
G
C
A
T
A
T
G
A
G
C
A
C
C
C
T
T
C
T
C
A
8650
W P E L P N R I D A A Y E H P S H 343
T
G
A
C
C
T
C
A
T
C
T
T
C
A
T
C
T
T
C
A
G
A
G
GTAAGCT TTCCACAGAG GAGTCCTCAC
8700
D L I F I F R 350
ACAAGACCAG GGGAGGCAGT GCTGAATTTG ATGCCACTAG AGATTCAGTA
8750
AAATGATCAC TACTGAAAAT ATACCTAAAT TAAAGACCAA GTATTAAAAA
8800
AATGGAAGCC AGAAAGTACC TGAAACCATT CTACCATGAA TCTCCAAATT
8850
GA
A
CATATAA AAGGTCTACA TTATTAGTCT TGTCATATCC ACTCTTTCTT
8900 |
var(8853):[G:0.11]
TCATATGAAT CATGTCAGTT TTTTCTCTTA GTTCTGCTTA AAAATTGTTT
8950
ATTGAGAAAA CATTATACCA A
T
ATATTCTG AAAAAGTGGA AAAAATATTA
9000 |
var(8972):[C:0.01]
TGAATCATTC TTCCTTCTGA AAACTCAGTT TATTTCATTT GCTCATTTTC
9050
ATTATGTAAT ACAAATTTTT ACATATTTAT TTTCATAGTA TAGATACATT
9100
TTTATATTCT ACTGCTTTCC TTGACATAAA ATTATG
A
CCA ATTTCCAAAT
9150 |
var(9137):[G:0.01]
TGCTACTTTA TCTTTATGAC CATAATTTAA AATGATTACA TAACTTCCTG
9200
CTGACACTGT TTGTATTGTT CAACTATTTA TAATATTAAT GTTATAATAA
9250
AGCTACTTTT TAGAGAATAA AATAACTTTC AAACTGGTGT AACGTTTGAG
9300
TTTTCAGTCT AATTTACTCT TCCTACTGTG TTGTTTGTTC ATGTACAAAT
9350
TTTAATGTAT TTTTTCCACC TAGCTTTAAA CTTAATATTC AGAGCTAATA
9400
AATTGCCAAG
T
TAA
C
TGTGA TATTTGATTA GCTATATTCA TAATTGGGAA
9450 |
var(9411):[C:0.03]
|
var(9415):[T:0.04]
GTTAAGATCC TAAATTTTAT TTTTTTGTTT CAAGAATGCT TATATTTTTA
9500
TGTTTCATAA ACATGATGAC TGTAAATACT AAATATTTTA TTAATATTTC
9550
TCAATGTAAA AGTGGGCCTG TCTTTAAGCA CATGTCTATA TATGTAAGTC
9600
CTAATAGATT CCCTTGGATA ATAGAACTGT TATTTCACTC ATTCCAG
G
T
A
9650 | Exon 8
G 351
G
A
A
A
A
T
T
T
T
G
G
G
C
T
C
T
T
A
A
T
G
G
T
T
A
T
G
A
C
A
T
T
C
T
G
G
A
A
G
G
T
T
A
T
C
C
C
A
A
A
9700
R K F W A L N G Y D I L E G Y P K 368
A
A
A
A
T
A
T
C
T
G
A
A
C
T
G
G
G
T
C
T
T
C
C
A
A
A
A
G
A
A
G
T
T
A
A
G
A
A
G
A
T
A
A
G
T
G
C
A
G
C
9750
K I S E L G L P K E V K K I S A A 385
T
G
T
T
C
A
C
T
T
T
G
A
G
G
A
T
A
C
A
G
G
C
A
A
G
A
C
T
C
T
C
C
T
G
T
T
C
T
C
A
G
G
A
A
A
C
C
A
G
G
9800 |
var(9765):[G:0.01]
V H F E D T G K T L L F S G N Q 401
T
C
T
G
G
A
G
GTA TGGCAGCAGT AGGTACTGAC CCATCTGTGT CATAGCCGCA
9850
V W R 404
AAGTGCCTCA AACATCTGTC A
C
TACTATAC ATTATTCCTA CACACTATTG
9900 |
var(9872):[T:0.01]
TAAATGTCAT ACTAGTCATT CATTTTCATT CCATGTCAGC TCTTTCAGGC
9950
AGACCCTCAG ACATGTATTT AAAAGTCTCA AGCTCTCTTG AACACACACA
10000
CACACACACA CACACACACA CACACACACA ATACTCAAAC ATTCCTCTTC
10050
TCAAACATTC TTTTCTTAGC CATTTGTTGT GCCTCTCAAC CATCTTTGGC
10100
ACCCCCTC
T
T
T
C
T
T
T
C
T
T
T
T
T
T
T
T
T
G
A
G
A
C
T
G
A
G
T
C
T
T
G
C
T
C
T
G
T
T
A
T
C
C
10150 |
REPEAT
A
G
G
C
T
T
G
A
G
T
G
T
A
G
T
G
G
C
A
T
G
A
T
C
T
T
G
G
C
T
C
A
C
T
G
T
A
A
C
C
T
C
T
G
C
C
T
C
C
T
10200
G
T
A
T
T
G
A
A
G
C
A
A
T
T
C
T
C
A
T
G
T
C
T
T
G
T
G
T
C
T
C
A
G
T
C
T
C
C
C
A
A
G
A
A
G
C
T
G
G
G
10250 |
var(10218):[G:0.03]
A
T
T
A
C
A
G
G
C
A
T
G
T
G
C
C
A
C
T
A
C
A
C
C
C
A
A
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
10300 |
var(10256):[C:0.27]
G
A
C
G
G
G
G
T
T
T
T
G
C
C
A
C
A
C
T
G
G
T
C
A
G
G
C
T
C
C
T
G
G
C
T
T
C
C
A
G
C
A
A
T
C
C
A
C
C
T
10350 |
var(10303):[T:0.01]
|
var(10325):[C:0.01]
G
C
C
T
C
A
G
C
C
T
C
C
C
A
A
A
A
T
G
G
T
G
G
A
A
T
T
A
C
A
G
T
C
G
T
G
A
G
C
C
A
C
C
A
C
A
C
C
C
A
10400
ATTGGCACCT TCTCTTTCTA ATCTTTCTCC TGTATTCTCT TTCTTGTCAC
10450
TTTCTCCTAA TTTACATGTA GCTCCATCTT CCGTGGCCAA AGAGGATACC
10500
AGCATGAGTA CAGGAAAAGA TTGGTTTAGA GAAGGCCCTC CTATCTGCAG
10550
AGTTAGCTGA TCCACTGGAG AGGTTGACCA GGAAGCTGAC AGGCCCATAG
10600
TTTATAAAGT GAAACTTTCT GAAGGGCGAG TGAAGCTGGA ATGTTTAAAA
10650
CACATGTAAA GATTTAGGCA GCATTGACAT CAACAACATT TAAGAGTCCA
10700
GATTCAAGTC TATATTTGGG AATGGGAATA TCTCATCAGT ACCCTACAT
T
10750 |
var(10750):[C:0.01]
CTAAATGTTT AAAGTGGAAA CTTTCCTCCA TCTCTACATA CACACAGTCT
10800
CACACACACA CATGCATACC CGCACACACG CACATACCTG TATATATCAT
10850
CTTTGCCTTT TGACTTATTT CTGACAATGA CATTTACAAC ATTCTAGAAA
10900
TCACTGCCAG CTTCTACCAG GTACCGCATT TCATTCCCTA CCTCCATAAG
10950
AAGTATATTG TTCAGTCAGG ATTAATTG
C
T
T
A
C
T
G
C
A
T
C
T
C
A
G
A
T
A
T
G
C
T
11000 |
REPEAT
G
T
T
T
T
T
T
A
T
A
T
C
C
C
C
T
T
A
A
G
C
T
T
C
T
C
T
T
A
G
G
C
A
A
T
T
T
T
T
T
T
T
T
G
C
C
A
G
A
A
11050
G
A
T
C
C
T
T
C
C
C
T
G
C
A
T
C
T
C
T
C
C
C
T
C
T
T
G
A
A
A
T
T
C
T
A
T
C
C
A
T
T
G
T
T
T
A
A
A
G
T
11100
T
C
A
T
T
C
G
A
A
A
T
A
T
C
T
T
T
T
C
A
T
C
T
A
C
A
A
A
G
C
C
T
C
T
T
T
T
G
A
T
T
T
C
C
C
C
A
T
T
C
11150
A
G
G
G
G
T
T
A
T
T
G
C
C
C
G
G
C
T
T
C
C
T
G
T
A
C
T
C
C
C
ATGACATTTC ATGATTACTC
11200 |
var(11165):[A:0.02]
TCTCATGCTT GACTTCTATT GCCTGGCGTT GCAGTTATGT GTATACACAT
11250
GCCTTAGCTT TATTGGTAGT TTAGTGGTTC TTATCTTTTA CTTGTTGGAA
11300
CATACCTCCA AGATATTCAA AAAGCTCTCA TCAGTAACAG TAGTGGCACC
11350
TTATGGGAGC CTGTTTTCCT AGGTTAATTT TAGGATATGT TTGCCTGGTT
11400
AGGGTGTGGC TGTGGG
C
AGG GGAGAAGGAG CTTGAAATAT GCAGTTATGG
11450 |
var(11417):[A:0.01]
AGGGGGAAAG CTATGCTTCC CTTCCTACCT TTAGTATTAC CATATGCCCC
11500
TACAACTTTT TAGTACAGAA ATTAAACCTT AAATATTTTT GTAGCCATTA
11550
CTGTACACTA AGTAAGTGCA AGTAAGTGCA AGTTGTCTTA CACATAGTGA
11600
GAGATCAACA GCTAATTGTT CTATGCACAA ACATGCATTT ATTTCATGCT
11650
TAAGAACATG TTCCTAATGA CATACTTTTA TAACAGATAT ATCA
T
TTGTG
11700 |
var(11695):[C:0.02]
AAATGGAAAT GAGCTTGTAA CTCTCTTTAA AAAGATGGCC TTTGGGCAAG
11750
TCAACAAATA CTC
G
TCAAGC ATCCACTGTA CACTCAGTAT TCTCATTCCT
11800 |
var(11764):[A:0.03]
AATTTTAAAA AGCTACCAGA TGCTTTAAAT GGACTGAAAA TTTTAAAATT
11850
CTTGTCAATT TTGAAAGATG CCATTGTATC TATTGTATTA TTTCTAAGGT
11900
ACTTTCTAAG AAATATAACT GACTTAGGAG TTTTTTTTCT TTAAATAG
A
T
11950 | Exon 9
404
A
T
G
A
T
G
A
T
A
C
T
A
A
C
C
A
T
A
T
T
A
T
G
G
A
T
A
A
A
G
A
C
T
A
T
C
C
G
A
G
A
C
T
A
A
T
A
G
A
A
12000
Y D D T N H I M D K D Y P R L I E 421
G
A
A
G
A
C
T
T
C
C
C
A
G
G
A
A
T
T
G
G
T
G
A
T
A
A
A
G
T
A
G
A
T
G
C
T
G
T
C
T
A
T
G
A
G
A
A
A
A
A
12050
E D F P G I G D K V D A V Y E K N 438
T
G
GTAAGTAG TTACATTGCA
C
TGACTTTAA AGA
G
GAGCTT CTGTAGCCCC
12100 |
var(12071):[T:0.03]
|
var(12084):[C:0.01]
438
TCAAAACTCT TTTCTGTACA AAGCATTTTT ATATAGGACC TAGATGTGTT
12150
AATAAATGTA TGGCAGTTAA GGAATTAATT GTTCCTGTGT GACTACCTAC
12200
AAAGACAG
C
A AACCAAAAAA AACATGGTTA GAATAAATAA GAATTTTACT
12250 |
var(12209):[A:0.01]
TAATGATTGC TAATTCTATA AATACGAGAT GCTAAACCTT CAACATTACC
12300
TTAATCTATG CTTAAAGATG CCAAAATGCA AGGATATTGC CAGAATTCAA
12350
ACTGGCTGTG GAGTGGGAAG TAATTTATAT ATAAAGACTC ATAACTACCT
12400
TAACTATATA GTGACTTTTT ACTTTAATTA TGTTCTCAAC C
T
T
T
T
T
T
T
T
T
12450 |
REPEAT
|
NOT SCANNED
T
T
T
T
T
T
G
A
C
A
G
A
G
T
C
T
C
A
C
T
C
T
G
T
C
A
C
C
C
A
G
G
C
T
G
G
A
G
T
T
C
A
T
T
G
T
C
G
C
A
12500
A
T
C
T
G
A
G
C
T
C
G
C
T
G
C
A
A
C
C
T
C
C
G
C
C
T
C
C
T
G
G
G
T
T
C
A
A
G
A
G
A
T
T
C
T
C
C
T
G
C
12550
C
T
C
A
G
C
C
T
C
T
G
G
A
G
T
A
G
C
T
G
G
G
A
T
T
A
C
A
G
G
T
G
C
C
T
G
C
C
A
C
C
A
T
G
C
C
T
G
G
C
12600
T
G
A
T
T
T
T
T
G
C
A
T
T
T
T
T
A
G
T
A
G
A
G
A
T
G
G
A
G
T
T
T
C
G
C
C
A
T
G
T
T
G
G
C
T
A
G
G
C
T
12650
G
G
T
C
T
T
G
A
A
C
T
C
C
T
G
G
C
C
T
C
A
A
G
C
G
A
T
T
C
A
C
C
C
G
C
C
T
C
G
G
C
C
T
C
C
C
A
A
A
G
12700
T
G
C
T
C
A
G
A
T
T
A
C
A
G
G
C
C
T
G
A
C
C
T
C
A
C
C
G
A
C
C
T
C
C
T
T
T
A
A
C
T
A
T
G
A
A
A
A
G
A
12750
G
A
T
A
T
T
A
T
T
G
A
T
A
A
C
T
T
A
T
A
A
C
A
A
A
T
A
G
G
C
T
G
G
G
T
G
C
G
G
T
G
G
C
T
C
A
T
G
C
C
12800 |
REPEAT
T
G
C
A
A
T
C
T
G
A
G
C
A
C
T
T
T
G
G
G
A
A
G
C
T
G
A
G
G
T
G
G
G
C
G
G
A
T
C
A
C
T
T
G
A
G
G
T
C
A
12850
G
G
A
G
T
T
C
A
A
G
A
C
C
A
G
C
C
T
G
A
C
C
A
A
C
A
T
G
G
C
G
A
A
A
C
C
C
C
A
T
C
T
C
T
A
C
T
A
A
A
12900
A
A
T
C
C
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
G
C
T
G
G
G
A
G
T
G
G
T
G
G
C
A
T
G
C
A
C
C
T
G
12950
T
A
A
T
C
C
C
A
G
C
T
A
G
T
C
A
G
G
A
G
G
C
T
G
A
G
G
C
A
G
G
A
G
A
A
T
C
A
C
T
T
G
A
A
C
T
T
A
G
G
13000
A
G
T
C
A
G
A
G
G
T
T
G
C
A
G
T
G
A
G
C
C
A
A
G
A
T
C
A
C
T
G
C
C
A
C
T
G
C
A
C
T
C
T
A
G
C
C
T
G
G
13050
A
T
G
A
C
A
G
A
G
T
G
A
G
A
C
T
C
T
G
T
C
T
C
A
TATACG CACACAAAAA TCGATAATCC
13100
AAGTAGCAAA ACTGTGTAGG AGGATTCACA CCTTAAAAGA ACAACTAAAA
13150
AATAAAAATA AAAAAATAAA A
A
ATTTAAAA AGGAACAACT ATTAAAGAAC
13200 |
var(13172):[G:0.01]
TAATAGAGTT TAAAAAGAAA AAGTTTGAAA TTCCTACAAA TGGGATCTAA
13250
GAGATTGAAC CATTAATATT AACTGGATTA AAACCTTATT ATTTTCAAAC
13300
TCTGAAATTG TCTTTATGCT TTTTCTTATA G
G
T
T
A
T
A
T
C
T
A
T
T
T
T
T
T
C
A
A
13350 | Exon 10
G Y I Y F F N 445
C
G
G
A
C
C
C
A
T
A
C
A
G
T
T
T
G
A
A
T
A
C
A
G
C
A
T
C
T
G
G
A
G
T
A
A
C
C
G
T
A
T
T
G
T
T
C
G
C
G
13400
G P I Q F E Y S I W S N R I V R 461
T
C
A
T
G
C
C
A
G
C
A
A
A
T
T
C
C
A
T
T
T
T
G
T
G
G
T
G
T
T
A
A
G
T
G
T
C
T
T
T
T
T
A
A
A
A
A
T
T
G
13450 |
UTR
V M P A N S I L W C 471
T
T
A
T
T
T
A
A
A
T
C
C
T
G
A
A
G
A
G
C
A
T
T
T
G
G
G
G
T
A
A
T
A
C
T
T
C
C
A
G
A
A
G
T
G
C
G
G
G
G
13500
T
A
G
G
G
G
A
A
G
A
A
G
A
G
C
T
A
T
C
A
G
G
A
G
A
A
A
G
C
T
T
G
G
T
T
C
T
G
T
G
A
A
C
A
A
G
C
T
T
C
13550
A
G
T
A
A
G
T
T
A
T
C
T
T
T
G
A
A
T
A
T
G
T
A
G
T
A
T
C
T
A
T
A
T
G
A
C
T
A
T
G
C
G
T
G
G
C
T
G
G
A
13600 |
var(13592):[A:0.01]
A
C
C
A
C
A
T
T
G
A
A
G
A
A
T
G
T
T
A
G
A
G
T
A
A
T
G
A
A
A
T
G
G
A
G
G
A
T
C
T
C
T
A
A
A
G
A
G
C
A
13650
T
C
T
G
A
T
T
C
T
T
G
T
T
G
C
T
G
T
A
C
A
A
A
A
G
C
A
A
T
G
G
T
T
G
A
T
G
A
T
A
C
T
T
C
C
C
A
C
A
C
13700
C
A
C
A
A
A
T
G
G
G
A
C
A
C
A
T
G
G
T
C
T
G
T
C
A
A
T
G
A
G
A
G
C
A
T
A
A
T
T
T
A
A
A
A
A
T
A
T
A
T
13750 |
var(13746):[C:0.02]
T
T
A
T
A
A
G
G
A
A
A
T
T
T
T
A
C
A
A
G
G
G
C
A
T
A
A
A
G
T
A
A
A
T
A
C
A
T
G
C
A
T
A
T
A
A
T
G
A
A
13800
T
A
A
A
T
C
A
T
T
C
T
T
A
C
T
A
A
A
A
A
G
T
A
T
A
A
A
A
T
A
G
T
A
T
G
A
A
A
A
T
G
G
A
A
A
T
T
T
G
G
13850
G
A
G
A
G
C
C
A
T
A
C
A
T
A
A
A
A
G
A
A
A
T
A
A
A
C
C
A
A
A
G
G
A
A
A
A
T
G
T
C
T
G
T
A
A
T
A
A
T
A
13900
G
A
C
T
G
T
A
A
C
T
T
C
C
A
A
A
T
A
A
A
T
A
A
T
T
T
T
C
A
T
T
T
T
G
C
A
C
T
G
A
G
G
A
T
A
T
T
C
A
G
13950
A
T
G
T
A
T
G
T
G
C
C
C
T
T
C
T
T
C
A
C
A
C
A
G
A
C
A
C
T
A
A
C
G
A
A
A
T
A
T
C
A
A
A
G
T
C
A
T
T
A
14000
A
A
G
A
C
A
G
G
A
G
A
C
A
A
A
A
G
A
G
C
A
G
T
G
G
T
A
A
G
A
A
T
A
G
T
A
G
A
T
G
T
G
G
C
C
T
T
T
G
A
14050
A
T
T
C
T
G
T
T
T
A
A
T
T
T
T
C
A
C
T
T
T
T
G
G
C
A
A
T
G
A
C
T
C
A
A
A
G
T
C
T
G
C
T
C
T
C
A
T
A
T
14100
A
A
G
A
C
A
A
A
T
A
T
T
C
C
T
T
T
G
C
A
T
A
T
T
A
T
A
A
A
G
G
A
T
A
A
A
G
A
A
G
G
A
T
G
A
T
G
T
C
T
14150
T
T
T
T
A
T
T
A
A
A
A
T
A
T
T
T
C
A
G
G
T
T
C
T
T
C
A
G
A
A
G
T
C
A
C
A
C
A
T
T
A
C
A
A
A
G
T
T
A
A
14200
A
A
T
T
G
T
T
A
T
C
A
A
A
A
T
A
G
T
C
T
A
A
G
G
C
C
A
T
G
G
C
A
T
C
C
C
T
T
T
T
T
C
A
T
A
A
A
T
T
A
14250
T
T
T
G
A
T
T
A
T
T
T
A
A
G
A
C
T
A
A
A
A
G
T
T
G
C
A
T
T
T
T
A
A
C
C
C
T
A
T
T
T
T
A
C
C
T
A
G
C
T
14300
A
A
T
T
A
T
T
T
A
A
T
T
G
T
C
C
A
G
T
T
T
G
T
C
T
T
G
G
A
T
A
T
A
T
A
G
G
C
T
A
T
T
T
T
C
T
A
A
A
G
14350 |
var(14317):[G:0.29]
A
C
T
T
G
T
A
T
A
G
C
A
T
G
A
A
A
T
A
A
A
A
T
A
T
A
T
C
T
T
A
T
A
A
A
G
T
G
G
A
A
G
T
A
T
G
T
A
T
A
14400
T
T
A
A
A
A
A
A
G
A
G
A
C
A
T
C
C
A
A
A
T
T
T
T
T
T
T
T
T
A
A
A
G
C
A
G
T
C
T
A
C
T
A
G
A
T
T
G
T
G
14450
A
T
C
C
C
T
T
G
A
G
A
T
A
T
G
G
A
A
G
G
A
T
G
C
C
T
T
T
T
T
T
T
C
T
C
T
G
C
A
T
T
T
A
A
A
A
A
A
A
T
14500 |
var(14496):[C:0.01]
C
C
C
C
C
A
G
C
A
C
T
T
C
C
C
A
C
A
G
T
G
C
C
T
A
T
T
G
A
T
A
C
T
T
G
G
G
G
A
G
G
G
T
G
C
T
T
G
G
C
14550
A
C
T
T
A
T
T
G
A
A
T
A
T
A
T
G
A
T
C
G
G
C
C
A
T
C
A
A
G
G
G
A
A
G
A
A
C
T
A
T
T
G
T
G
C
T
C
A
G
A
14600 |
var(14573):[G:0.01]
G
A
C
A
C
T
G
T
T
G
A
T
A
A
A
A
A
C
T
C
A
G
G
C
A
A
A
G
A
A
A
A
T
G
A
A
A
T
G
C
A
T
A
T
T
T
G
C
A
A
14650
A
G
T
G
T
A
T
T
A
G
G
A
A
G
T
G
T
T
T
A
T
G
T
T
G
T
T
T
A
T
A
A
T
A
A
A
A
A
T
A
T
A
T
T
T
T
C
A
A
C
14700
A
G
A
CAATTGC TATATGGTAC ATTGTCTTTA GGTATAATTT CAATCTTTCC
14750
TCACCCAAAG AGG
G
TTCATT GCCAATA
T
T
T
T
T
A
T
T
T
T
T
G
G
A
G
A
C
A
G
A
G
T
C
14800 |
var(14764):[:0.01]
|
REPEAT
T
C
T
C
T
C
A
G
T
T
G
C
C
C
A
G
G
C
T
T
G
A
A
T
G
C
A
G
T
G
G
T
G
T
G
A
T
T
C
C
A
G
C
T
C
A
C
T
G
C
14850
A
A
C
C
T
C
C
A
C
T
T
C
C
C
G
A
G
T
T
C
A
G
G
C
A
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
C
A
A
G
T
14900
A
G
C
T
G
G
G
A
T
T
A
C
A
G
G
T
G
A
G
C
G
C
C
A
C
C
A
T
G
C
C
C
G
G
C
T
A
G
T
T
T
T
T
G
T
A
T
T
T
T
14950
T
A
A
T
A
G
A
G
A
T
G
G
G
G
T
T
T
C
A
C
C
A
T
A
T
T
G
G
C
C
A
G
G
T
A
G
T
C
T
T
G
A
A
T
T
C
C
T
G
A
15000
T
C
T
C
A
G
G
T
G
A
T
C
T
G
C
C
T
G
C
C
T
C
A
G
C
T
T
C
C
C
A
A
A
G
T
C
C
T
G
G
G
A
T
T
A
C
A
G
G
T
15050
G
T
G
G
G
C
C
A
C
T
G
C
A
C
TGGACC CTTCTTTTTT TTTCTTTTTA AGAAAAGATG
15100
TTTA
G
G
C
C
A
G
G
T
T
C
A
G
T
G
G
C
T
C
A
T
G
T
T
T
G
C
A
C
T
C
C
C
A
G
C
A
C
T
T
T
G
G
G
A
G
A
15150 |
REPEAT
C
C
A
A
T
T
G
T
T
T
G
G
G
C
C
C
A
G
G
A
T
T
T
C
A
A
G
A
T
C
A
G
C
C
T
G
G
G
C
A
C
C
A
T
G
G
T
G
A
A
15200
A
C
A
C
A
G
T
C
T
C
T
A
C
A
AAAACA AAACAAAACA AAACAAAA
A
A AAA
A
C
A
A
A
T
T
15250 |
var(15239):[C:0.01]
|
REPEAT
A
G
C
T
G
G
G
G
G
T
G
G
T
G
G
T
A
T
G
T
G
C
C
T
G
T
A
G
T
C
T
C
A
G
C
T
A
C
T
A
G
G
G
A
G
G
C
T
A
A
15300
G
G
T
G
G
G
A
G
G
A
C
T
A
C
A
C
G
A
G
G
C
A
G
G
G
A
G
A
G
G
T
C
A
A
G
G
C
T
G
C
A
G
T
G
A
A
A
T
G
T
15350 |
var(15316):[T:0.03]
|
var(15337):[T:0.02]
G
A
T
C
A
C
A
C
C
A
C
T
G
C
A
C
T
C
C
A
G
C
C
T
G
G
G
T
G
A
C
A
G
A
G
C
A
A
G
A
C
C
T
A
G
T
C
GAA
15400
GAAGAAGGAG AAGGAGAAGA AGCCAG
G
T
C
C
C
A
G
C
T
A
C
T
C
A
G
T
A
G
G
C
T
G
A
G
15450 |
REPEAT
G
C
A
A
G
A
G
G
A
T
C
A
C
C
T
G
A
G
C
C
C
A
G
G
A
G
G
T
T
G
A
G
G
C
T
G
C
A
G
T
T
A
G
C
T
A
T
G
C
T
15500
T
A
C
A
C
C
A
C
T
G
C
A
C
T
C
C
A
T
C
C
T
G
G
G
T
G
A
T
A
G
A
G
T
G
A
G
A
C
C
C
C
G
T
C
T
C
A
A
A
A
15550 |
var(15542):[A:0.01]
A
A
T
A
A
A
C
A
A
A
C
A
A
A
A
A
T
A
G
A
A
A
A
GATGTTT CACTTGATTT CAGAAACATT
15600
TTCCCTATGT TTAACCATTT TCTTTCATGA TACTTCTCTC TCATGGATAG
15650
ACAGACAGAC AGACAGATAT ACATAAAGAT ATATAGATAT AAAGATATAC
15700
ATAAAGGTAT ATAGAAAATA TATATAGTCA AGATTGTTTC CTGACTTCCA
15750
CCTTTACTCC AGTCTCAATT CAAAATTCCA AATCCAATTG GTGTTACC
T
T
15800 |
var(15799):[C:0.01]
GATGAGTGTC CTTCCACAGT AACCAAAGCA TCGAATTCAA ATTATAGCAA
15850
ATGTCTATTT GGAGTTTACC ACTGGTGATA GGGGTAGCAT TAAAGAGAGC
15900
TGATTATGAA CTGAGCAGAT GGTCCTAATA GAATCTTCTA TGAAATAGGT
15950
TACAGGTAAA ATACAGATAG CCAGTTT
G
TA TAGATATTCA CGAATGGGGT
16000 |
var(15978):[C:0.01]
TGAGAAGACC AAATGAATGT TTTATGAGA
A
GTAATATTAT ATTCACAAAT
16050 |
var(16030):[G:0.01]
TAAAGTGAGA GTGCATTTAC CTAGAGCTAA TGTAC
T
AGGC AAATGCACTG
16100 |
var(16086):[G:0.01]
CCTTAAAATT GAATTGTA
G
C TAGTAATGGC CTCTTCATCA GATAATAAGG
16150 |
var(16119):[C:0.01]
G
TAAAAGGTT TGAAAAACTC CTCAAAGTGA ACCAATAGCA TACTTGTATT
16200 |
var(16151):[C:0.01]
TGGAATAGGA GAAACTGACA AGATCTTATA TTGGTGTAAC AAATTTTGCT
16250
CTTGGAATTA
T
CCTGGGAGA ACTTTTGTAT TAAAGCAAAA ATATTGTCCT
16300 |
var(16261):[C:0.08]
GGATTTCCAT ATCCTCATGT CAGAATAAAA ACACGAAAAC ATATATAACA
16350
GAAAGATAGC CACCATAAAA GCTACCAAGT TTAACTCAC
T
T
C
C
C
G
T
T
T
A
G
16400 |
REPEAT
A
A
A
A
A
A
A
A
G
T
G
C
A
G
C
T
C
T
C
T
G
C
ACGCACAG TTTTCTCGGA GCCAACAGGA
16450
GTGGATTAAG CCCTGGTCAC AGAAAATACC TTGATTTACG GATTCATC
A
C
16500 |
var(16499):[C:0.01]
GACGCTGTGA GATTTACAAT ACTTCCACTA GGTGGCACCA GCAACACCCT
16550
TTTTAAAAAG GTTGAACTGG TCAGAGAATT CAATTAAGTC ACAAAACCAG
16600
TGCTTTGTTC TTTAACATAA GGTTGAGGAA CTTAGCCACA TCGCTGATTG
16650
TTTAACTCCT GAC