MARCKS Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

AGGACGCGTC TGGGAGAAAA TCTGAAAGCG AGCTAGCAGT CACCCCAATT 50 TAAAATAGGA GGGGGATGCG GAGGAAGGGG CATGATTCAC GTTGGGGGTG 100 GGGGGAAATC AAGAGCCTTA AATGGGCTTT TGGGAATCGC CTGGATGGTG 150 GTGTCGGATC AGCCCAGTTG GCTTTTCAAG TTGGAACTGC TAATACAAGG 200 GATTTGCGTC CATCCTGGCG GCTGGGGTCG TGGGCCAGGC CAGCGGGCTC 250 TCTTAAGGGT AATAACACGT TTGCTGGCAA GATGCATTTC TACGGAAACG 300 TCTTTACATC AGCTCTGGGG AATATGACCA TGGTCGAATA ATGCATCTGA 350 AGGAACTGGA CAGTGAGAAG ACGAAGCTTC ACGTAACAAT GTTCAGCTTG 400 GTGATTTTTA AAGCAACGCT TGAACAAAGA GTTACTGGCT TGAACCAACC 450 GTCTTTTTCA CTCAGAGTGT GACCTATTTC CCTACAATGA GCAGAAAATA 500 AAACTGTTTG AGAATTCAGA GCCAGCACCA GGAGAAATGA ACCATTCCCT 550 CGACTGCTTC TCACCTTCAT AAGCGAAAGA TTATTCCTTG CAAGATCACC 600 AAATGTAAAC GAGAAAAGGT GGTCTGATTT TGCCACGAGT GAAAACTTTG 650 GGAAGAAAAT GCTTATTAAG CTGTTTCCTT GGTTCCCCTC ACCCCTCATA 700 CTTTAAGTCA GTGCCTTGTC TCTCACGCAC AAAAAGCGTC TGGTACTTCG 750 GTGGCAAGGA GTGCAGTGAC AGATGGAGGT ATCCTGTGTA CCATTATAGA 800 | var(779):[A:0.01] AGCTTTTCCT CTAACCCAAG TTAGACTTGG AGAGCTCAGG GATCTTGCTA 850 | var(803):[G:0.10] TCTCTCAACA TACAGAACAT TTCTCCTTAG AACTGCAATC CGGTTTAGAA 900 TGTCATCGTT GCTGCTGCCT CCCTTCCTTT CAGGAGCACA TTCGCCTGCG 950 TGCGCACTCA CACACACGTT CAAAAAGAGT CCATTCGATT CTGGCAGTAG 1000 GCTGAAAACG ATCCATATTG ACGCGAATAA CATCCCAACT GTAAATATGG 1050 ATTCGTCTAC TCGAGGCTGT GTCTCATTTC ACCATAGAGG AAAATTATGT 1100 | NOT SCANNED CATTTAAAAC AGTGATAAAA CGCGAAGAGT TTCGATCTTC TGTAAATGGC 1150 TCTCACTTTG AATTGTGGGG GAAAAAAATC ACTAATTGGG AATAGCCAGA 1200 GAAGGGGGAA TTTGTTGAGC GCCCAAGGCC AATCTCAAAA TATTTTATTT 1250 CATGCCAATG TGGGAGAGGG AAGGGAGTGT GGCTTCGCTG TTTGCCGCTT 1300 TTGCATTTTC CACATCTGGC CTACAGACCT AATTCTAACT TGCGATCTCG 1350 CTTGATGAAA TTCGATCTTC GTGGTTTAAA TACCTTTCAA TTTGGGACGA 1400 TTTAACCATT GCAGCAGTTC AAAAAACAAA CCCTGAGCAT TATCTGTAAA 1450 | var(1432):[T:0.02] ACCAATATGG AAAAAAGAAA GAAAACATGC TGCAAACACA CAAATCGCAA 1500 CCATTGTCTT TAACACTCGC ATACACACAC ATACACATAA ACACACGGAA 1550 AGATGGGGGA GGGGAGCGAG TGGAGAGAGA GAGACACACG GATATAGACC 1600 | var(1583):[:0.12] GACGAGAGTC AATGCGAGTC AAGTTAACGC TTTCTCCGCC CCGATGCACA 1650 AGTACCCCCC TCCCGTGTTA ATTAATTCCA AACAAAGCAA GCCAATCAAG 1700 AAATGCATTA TTATTTTCAA GCAGAGAGAG ACGAGTGCCA TGTATTTTTT 1750 | var(1728):[C:0.01] AATTGATTTA TTTATTTGGA GGACATTAAT TCTCGGTCTG AGGCTGATTT 1800 TCAAACCGTT TGCAAAGCGC GGCTCCATTG TTCGCCAGGC GCGCAGACCC 1850 CGCCCCCTGC TTTGTGTGCG GCGCGCGGAT TGGCCGACGC GCGCGGGGGC 1900 CGCGTCAGCG CCCGCGAGCC CATTCATCTG TGCACTTGGG CGTTGGACCC 1950 CGCATCTTAT TAGCAACCAG GGAGATTTCT CCATTTTCCT CTTGTCTACA 2000 | Exon 1 | UTR GTGCGGCTAC AAATCTGGGA TTTTTTTATT ACTTCTTTTT TTTTCGAACT 2050 ACACTTGGGC TCCTTTTTTT GTGCTCGACT TTTCCACCCT TTTTCCCTCC 2100 CTCCTGTGCT GCTGCTTTTT GATCTCTTCG ACTAAAATTT TTTTATCCGG 2150 AGTGTATTTA ATCGGTTCTG TTCTGTCCTC TCCAACCCCC CCACCCCCAC 2200 | var(2199):[:0.99] CCCCCTCCCT CCGGTGTGTG TGCCGCTGCC GCTGTTGCCG CCGCCGCTGC 2250 | var(2219):[A:0.01] TGCTGCTGCT CGCCCCGTCG TTACACCAAC CCGAGGCTCT TTGTTTCCCC 2300 | var(2258):[:0.03] TCTTGGATCT GTTGAGTTTC TTTGTTGAAG AAGCCAGCAT GGGTGCCCAG 2350 | var(2337):[A:0.01] M G A Q 4 TTCTCCAAGA CCGCAGCGAA GGGAGAAGCC GCCGCGGAGA GGCCTGGGGA 2400 F S K T A A K G E A A A E R P G E 21 GGCGGCTGTG GCCTCGTCGC CTTCCAAAGC GAACGGACAG GTAAATTCTA 2450 A A V A S S P S K A N G Q 34 CCTGTGGTTG TGGTCATTTA TTTCGTGTCT TTCTCTCCTT CCCTCCTGGT 2500 GGCTCCCAAG GCTCATTCGT GGAGAGGAGT GTGGCTGGAT TCTAGTCTGA 2550 AAGTTGAATG GAAATGGATA GCCTAAATTG TGGATTTTTC ATAGCCGGGG 2600 TCCCCCCACA CCAAAGGAGT GGTTCCTTAG AATCCTGGAG AATTCTTGAG 2650 TAGACGGGAG GAAAGGAGTG ATAAATCGTC TAAAATGGCG TGGTTTGGAG 2700 ATTGGCAGAA CGTGACTAGC TAGGTGCCCT CCTTCCCCCG CCCCCAGCCA 2750 GGTTTCATTT GTGTTTGGGG GCACAATGGT GTTTGGGTGT CTCTCGGGTT 2800 | var(2790):[G:0.15] TGTTGTCGAA GCTGGATTGT CTTCGAGATT TCTGAACTGG TGGTGTGATT 2850 GTGTGTGGCG GGGGGGGGGA GTCGGGAAAG GGGGGCGCAA TGGGGATGGT 2900 | var(2869):[:0.84] GGTGGAGAAA GGCGAGGAGG GAAAGGCTGT CTTATTGTAT GCCGCGGCGG 2950 CGTGCCCTGG GTTCTTGGAA AGGTGGCTGG CTGGGGCCAG ACAGAGGGCT 3000 | var(2992):[:0.02] TCGGTACCTT TTGATGAGGC TTTCCCACTG TCCTAAATCT TTATTCGTAG 3050 CTGTCTGTGG AATTACACAT CCATTTGATT TTTAAATGGT ATCTGTGGGG 3100 TGGGAACACT CGGTGGGTCC TTTAAGAACC TTTCCAGATG GTCAAAAAGA 3150 | var(3117):[:0.01] GGCGGTTCGT GCCTTTCGGT CGGGATTGTT CTTGTGCGTG GCGCCTCGAC 3200 CACCCGCGAG GGGCCGCCCG GCGCTGCCCG GACCCAGGCA GATAGCCACG 3250 ATTGGGTGGA CCCGAGAGGT CGGCCATGGG TGGCTGCTTC GCAAACACTG 3300 GGCACCCACC ACGCCTCTTT TCCTAGAGAA GAGATCGTGT CGCTTCGCCT 3350 GCTCTAACCT ACTGGGGAAA GCGAGGTCTG CCAAGAGGCT TTAAACCCGT 3400 TAAAAATGCA AAATGAGCCG CCGAGGCGCG CCCAGGCTTC GCAGAATCGC 3450 AGGGGAAGGT GGGCGTGGAA GCAGAGGCGA GACCTCAGAA ATAATGGGTT 3500 | var(3479):[A:0.01] TCCCCCTGCC TTGTTGGTTT CAGCCCGACC GGCAGGCCAG GAAACCACCT 3550 GAGCTTTGTT TGCGGACTGT TGGGCTGCGC GATCCGGGCT CGGGGGCGCC 3600 TCGGCCTGCG GGCAGGGCCC GGCTGGGCAG GGCGGGGTGG CCCGGCGACT 3650 | var(3608):[T:0.01] CCGCCCCTCC TCGCCTGCCT GCGCCCAACG CGGCGCGGTG GAGACACAGC 3700 | var(3694):[G:0.43] GCCCCCTGCC GGTGCCAAAG GCCTGGGTGG GCGCAGGAGC TCGGAGGGCC 3750 CCGCGCGGGC GCTCCTGGCT CGAGTGCTGT GATCCCCCTG GGAATTCCTG 3800 GTATTTTGAA GAGGCCTTTA TGTATTTAGG GCGAAAGAGG GATGTGAAAC 3850 GTAGGCGCGA ACCACCAGCT CTGGCTCTGT GCCTTCTTCC AAAGGGCGTT 3900 TGCTGTGTCA ACTAGTCCCT GGCACCTTTT TTCCCCCAAG CCCCCGATAA 3950 AGCGAGGGCT GGCATGGTTA GCCTTTGCTT GCTACGTTTC GGACTTCGTC 4000 TTTAGGGCAC TTGCTGAATG GCTGGGAGGC CATTGCCGTA CTTGGGGGCT 4050 | var(4024):[A:0.01] ACAGTTGTGT TTTGGGGGGG TCTCCAGGCA GCGGTGCCTA TTTCCTCGTT 4100 | var(4064):[C:0.04] | var(4070):[C:0.01] | var(4089):[C:0.43] CGTGGGGCTC TCTTCTGGGC ATCCACCCGC GCCTCCCTCC CCACAACGGC 4150 GGGGGTGGGG TCTCGATGGC CACAGGGGCC TTAGGGGGAA GCGGGGCACT 4200 CCCGGTCCAG GGCTGGGGGC GGGAATGGCG GCGCCCCGGC CGCTTCAGTG 4250 ACGCTCCCGC TTTCTCTGCC CCTTAGGAGA ATGGCCACGT GAAGGTAAAC 4300 | Exon 2 E N G H V K V N 42 GGCGACGCTT CGCCCGCGGC CGCCGAGTCG GGCGCCAAGG AGGAGCTGCA 4350 G D A S P A A A E S G A K E E L Q 59 GGCCAACGGC AGCGCCCCGG CCGCCGACAA GGAGGAGCCC GCGGCCGCCG 4400 A N G S A P A A D K E E P A A A 75 GGAGCGGGGC GGCGTCGCCC TCCGCGGCCG AGAAAGGTGA GCCGGCCGCC 4450 G S G A A S P S A A E K G E P A A 92 GCCGCTGCCC CCGAGGCCGG GGCCAGCCCG GTAGAGAAGG AGGCCCCCGC 4500 A A A P E A G A S P V E K E A P A 109 GGAAGGCGAG GCTGCCGAGC CCGGCTCGCC CACGGCCGCG GAGGGAGAGG 4550 E G E A A E P G S P T A A E G E 125 CCGCGTCGGC CGCCTCCTCG ACTTCTTCGC CCAAGGCCGA GGACGGGGCC 4600 A A S A A S S T S S P K A E D G A 142 ACGCCCTCGC CCAGCAACGA GACCCCGAAA AAAAAAAAGA AGCGCTTTTC 4650 T P S P S N E T P K K K K K R F S 159 CTTCAAGAAG TCTTTCAAGC TGAGCGGCTT CTCCTTCAAG AAGAACAAGA 4700 F K K S F K L S G F S F K K N K 175 AGGAGGCTGG AGAAGGCGGT GAGGCTGAGG CGCCCGCTGC CGAAGGCGGC 4750 | var(4747):[T:0.02] K E A G E G G E A E A P A A E G G 192 AAGGACGAGG CCGCCGGGGG CGCAGCTGCG GCCGCCGCCG AGGCGGGCGC 4800 K D E A A G G A A A A A A E A G A 209 GGCCTCCGGG GAGCAGGCAG CGGCGCCGGG CGAGGAGGCG GCAGCGGGCG 4850 A S G E Q A A A P G E E A A A G 225 AGGAGGGGGC GGCGGGTGGC GACCCGCAGG AGGCCAAGCC CCAGGAGGCC 4900 E E G A A G G D P Q E A K P Q E A 242 GCTGTCGCGC CAGAGAAGCC GCCCGCCAGC GACGAGACCA AGGCCGCCGA 4950 | var(4923):[T:0.01] A V A P E K P P A S D E T K A A E 259 GGAGCCCAGC AAGGTGGAGG AGAAAAAGGC CGAGGAGGCC GGGGCCAGCG 5000 | var(4995):[T:0.01] E P S K V E E K K A E E A G A S 275 CCGCCGCCTG CGAGGCCCCC TCCGCCGCCG GGCCCGGCGC GCCCCCGGAG 5050 A A A C E A P S A A G P G A P P E 292 CAGGAGGCAG CCCCCGCGGA GGAGCCCGCG GCCGCCGCAG CCTCGTCAGC 5100 Q E A A P A E E P A A A A A S S A 309 CTGCGCAGCC CCCTCACAGG AGGCCCAGCC CGAGTGCAGT CCAGAAGCCC 5150 C A A P S Q E A Q P E C S P E A 325 CCCCAGCGGA GGCGGCAGAG TAAAAGAGCA AGCTTTTGTG AGATAATCGA 5200 | UTR P P A E A A E 332 AGAACTTTTC TCCCCCGTTT GTTTGTTGGA GTGGTGCCAG GTACTGGTTT 5250 TGGAGAACTT GTCTACAACC AGGGATTGAT TTTAAAGATG TCTTTTTTTA 5300 TTTTACTTTT TTTTAAGCAC CAAATTTTGT TGTTTTTTTT TTTTCTCCCC 5350 | var(5343):[:0.68] TCCCCACAGA TCCCATCTCA AATCATTCTG TTAACCACCA TTCCAACAGG 5400 TCGAGGAGAG CTTAAACACC TTCTTCCTCT GCCTTGTTTC TCTTTTATTT 5450 TTTATTTTTT CGCATCAGTA TTAATGTTTT TGCATACTTT GCATCTTTAT 5500 | var(5462):[T:0.01] TCAAAAGTGT AAACTTTCTT TGTCAATCTA TGGACATGCC CATATATGAA 5550 | var(5526):[G:0.02] GGAGATGGGT GGGTCAAAAA GGGATATCAA ATGAAGTGAT AGGGGTCACA 5600 ATGGGGAAAT TGAAGTGGTG CATAACATTG CCAAAATAGT GTGCCACTAG 5650 AAATGGTGTA AAGGCTGTCT TTTTTTTTTT TTTTTAAAGA AAAGTTATTA 5700 CCATGTATTT TGTGAGGCAG GTTTACAACA CTACAAGTCT TGAGTTAAGA 5750 AGGAAAGAGG AAAAAAGAAA AAACACCAAT ACCCAGATTT AAAAAAAAAA 5800 AAACGATCAT AGTCTTAGGA GTTCATTTAA ACCATAGGAA CTTTTCACTT 5850 ATCTCATGTT AGCTGTACCA GTCAGTGATT AAGTAGAACT ACAAGTTGTA 5900 TAGGCTTTAT TGTTTATTGC TGGTTTATGA CCTTAATAAA GTGTAATTAT 5950 | var(5950):[C:0.03] GTATTACCAG CAGGGTGTTT TTAACTGTGA CTATTGTATA AAAACAAATC 6000 TTGATATCCA GAAGCACATG AAGTTTGCAA CTTTCCACCC TGCCCATTTT 6050 TGTAAAACTG CAGTCATCTT GGACCTTTTA AAACACAAAT TTTAAACTCA 6100 ACCAAGCTGT GATAAGTGGA ATGGTTACTG TTTATACTGT GGTATGTTTT 6150 TGATTACAGC AGATAATGCT TTCTTTTCCA GTCGTCTTTG AGAATAAAGG 6200 AAAAAAAAAT CTTCAGATGC AATGGTTTTG TGTAGCATCT TGTCTATCAT 6250 | var(6209):[:0.70] GTTTTGTAAA TACTGGAGAA GCTTTGACCA ATTTGACTTA GAGATGGAAT 6300 GTAACTTTGC TTACAAAAAT TGCTATTAAA CTCCTGCTTA AGGTGTTCTA 6350 ATTTTCTGTG AGCACACTAA AAGCGAAAAA TAAATGTGAA TAAAATGTAC 6400 AAATTTGTTG TGTTTTTTTA TGTTCTAATA ATACTGAGAC TTCTAGGTCT 6450 TAGGTTAATT TTTAGGAAGA TCTTGCATGC CATCAGGAGT AAATTTTATT 6500 GTGGTTCTTA ATCTGAAGTT TTCAAGCTCT GAAATTCATA ATCCGCAGTG 6550 TCAGATTACG TAGAGGAAGA TCTTACAACA TTTCCATGTC AAATCTGTTA 6600 | var(6559):[T:0.05] | var(6583):[:0.96] CCATTTATTG GCATTTAGTT TTCATTTAAG AATTGAACAT AATTATTTTT 6650 ATTGTAGCTA TATAGCATGT CAGATTAAAT CATTTACAAC AAAAGGGGTG 6700 TGAACCTAAG ACTATTTAAA TGTCTTATGA GAAAATTTCA TAAAGCCATT 6750 CTCTTGTCAT TCAGGTCCAG AAACAAATTT TAAACTGAGT GAGAGTCTAT 6800 AGAATCCATA CTGCAGATGG GTCATGAAAT GTGACCAAAT GTGTTTCAAA 6850 | var(6804):[T:0.09] AATTGATGGT GTATTACCTG CTATTGTAAT TGCTTAGTGC TTGGCTAATT 6900 TCCAAATTAT TGCATAATAT GTTCTACCTT AAGAAAACAG GTTTATGTAA 6950 CAAAGTAATG GTGTTGAATG GATGATGTCA GTTCATGGGC CTTTAGCATA 7000 GTTTTAAGCA TCCTTTTTTT TTTTTTTTTT GAAAGTGTGT TAGCATCTTG 7050 | var(7013):[A:0.30] TTACTCAAAG GATAAGACAG ACAATAATAC TTCACTGAAT ATTAATAATC 7100 | var(7091):[C:0.04] TTTACTAGTT TACCTCCTCT GCTCTTTGCC ACCCGATAAC TGGATATCTT 7150 TTCCTTCAAA GGACCCTAAA CTGATTGAAA TTTAAGATAT GTATCAAAAA 7200 CATTATTTCA TTTAATGCAC ATCTGTTTTG CTGTTTTTGA GCAGTGTGCA 7250 GTTTAGGGTT CATGATAAAT CATTGAACCA CATGTGTAAC AACTGAATGC 7300 | var(7293):[:0.01] CAAATCTTAA ACTCATTAGA AAAATAACAA ATTAGGTTTT GACACGCATT 7350 | var(7303):[G:0.27] CTTAATTGGA ATAATGGATC AAAAATAGTG GTTCATGACC TTACCAAACA 7400 CCCTTGCTAC TAATAAAATC AAATAACACT TAGAAGGGTA TGTATTTTTA 7450 GTTAGGGTTT CTTGATCTTG GAGGATGTTT GAAAGTTAAA AATTGAATTT 7500 GGTAACCAAA GGACTGATTT ATGGGTCTTT CCTATCTTAA CCAACGTTTT 7550 CTTAGTTACC TAGATGGCCA AGTACAGTGC CTGGTATGTA GTAAGACTCA 7600 | REPEAT GTAAAAAAGT GGATTTTTAA AAATAACTCC CAAAGTGAAT AGTCAAAAAT 7650 CCTGTTAGCA AACTGTTATA TATTGCTAAG TTTGTTCTTT TAACAGCTGG 7700 | var(7667):[C:0.14] AATTTATTAA GATGCATTAT TTTGATTTTA TTCACTGCCT AAAACACTTT 7750 GGGTGGTATT GATGGAGTTG GTGGATTTTC CTCCAAGTGA TTAAATGAAA 7800 TTTGACGTAT CTTTTCATCC AAAGTTTTGT ACATCATGTT TTCTAACGGA 7850 | var(7814):[C:0.01] AAAAAATGTT AATATGGCTT TTTTGTATTA CTAAAAATAG CTTTGAGATT 7900 AAGGAAAAAT AAATAACTCT TGTACAGTTC AGTATTGTCT ATTAAATCTG 7950 TATTGGCAGT ATGTATAATG GCATTTGCTG TGGTTACAAA ATACTTCCTC 8000 TGGGTTATAA TAATCATTTG ATCCAATTCC TATTGCTTGT AAAATAAAGT 8050 TTTACCAGTT GATATAATCA AGCCTGCTAA AATAGGATTT TTTTTTTACA 8100 | var(8097):[:0.99] AATTTTATTT TAAAATGCAA ATATTTTTAG AGAAAATTTT TAAATCTTAA 8150 GTGTTAAAGG TAAGCATTCA GTTTAAGAGA TTTAAATGAT ATGCTTGGCA 8200 TTATATTTAA CAAATAAAAT TATATCCATT GAAGGTGAGT TGTATGCCCC 8250 CAAGCCAATT AAAAATTTTA ACGATAGAAC TTGATAATAT ATTTGAGAAA 8300 CAATGCAATT TTTTTATCAT ATGAATATAA ACAATATATC TTTTCAAT