Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 000173 AA 20 11 11 18 60 AT 6 10 7 5 28 TT 0 0 2 0 2 0.442 2.051 0.299 0.342 0.371 000576 CC 20 9 11 17 57 CG 5 8 7 4 24 GG 0 0 2 0 2 0.309 1.609 0.299 0.233 0.080 000672 CC 24 16 22 21 83 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 000986 -- 25 20 18 22 85 +- 0 0 1 2 3 ++ 0 0 0 0 0 0.000 0.000 0.014 0.045 0.026 001022 AA 23 20 21 24 88 AC 2 0 0 0 2 CC 1 0 0 0 1 5.462 0.000 0.000 0.000 21.739 001023 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 26 19 19 23 87 0.000 0.000 0.000 0.011 0.003 001030 GG 25 20 21 24 90 GT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 001133 CC 0 0 2 0 2 CT 6 10 7 5 28 TT 20 10 13 19 62 0.442 2.222 0.505 0.324 0.323 003126 CC 0 0 0 0 0 CG 0 0 1 2 3 GG 25 20 19 20 84 0.000 0.000 0.013 0.050 0.027 003596 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 26 22 22 22 92 0.000 0.000 0.000 0.011 0.003 003846 CC 18 21 19 20 78 CG 6 0 1 0 7 GG 1 0 0 0 1 0.287 0.000 0.013 0.000 2.764 003851 CC 25 20 15 19 79 CG 0 0 5 0 5 GG 0 0 0 0 0 0.000 0.000 0.408 0.000 0.079 003950 AA 1 0 0 0 1 AG 6 0 1 0 7 GG 17 21 19 19 76 0.240 0.000 0.013 0.000 2.667 004115 AA 0 0 0 0 0 AG 0 2 1 0 3 GG 25 17 19 21 82 0.000 0.059 0.013 0.000 0.027 004470 AA 20 8 10 15 53 AG 2 8 6 5 21 GG 0 3 0 1 4 0.050 0.172 0.852 0.429 0.953 012345 AA 26 22 22 24 94 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 012538 CC 27 21 22 24 94 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 012814 -- 25 17 19 23 84 +- 2 0 0 0 2 ++ 0 0 0 0 0 0.040 0.000 0.000 0.000 0.012 012935 AA 25 22 22 23 92 AG 1 0 0 0 1 GG 1 0 0 0 1 11.304 0.000 0.000 0.000 41.103 012973 AA 27 21 22 22 92 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 013046 AA 26 22 22 17 87 AC 1 0 0 5 6 CC 0 0 0 1 1 0.010 0.000 0.000 0.571 4.413 014924 CC 25 19 18 21 83 CT 1 0 0 0 1 TT 1 0 0 0 1 11.304 0.000 0.000 0.000 37.102 015558 CC 1 0 0 0 1 CT 1 0 0 0 1 TT 25 20 22 23 90 11.304 0.000 0.000 0.000 40.214 015577 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 19 20 21 86 0.010 0.000 0.000 0.000 0.003 015800 AA 0 3 0 1 4 AT 1 8 8 5 22 TT 22 9 9 15 55 0.011 0.292 1.609 0.429 0.810 015881 -- 0 0 0 0 0 +- 1 0 0 1 2 ++ 21 17 21 22 81 0.012 0.000 0.000 0.011 0.012 024088 GG 0 3 0 1 4 GT 1 8 10 6 25 TT 26 10 11 16 63 0.010 0.429 2.051 0.195 0.544 024240 CC 0 0 0 0 0 CG 1 0 1 0 2 GG 26 21 19 23 89 0.010 0.000 0.013 0.000 0.011 024250 AA 1 0 0 0 1 AG 1 0 0 0 1 GG 25 21 20 23 89 11.304 0.000 0.000 0.000 39.769 024286 -- 0 0 0 0 0 +- 1 0 0 0 1 ++ 25 19 19 23 86 0.010 0.000 0.000 0.000 0.003 024392 CC 25 9 11 16 61 CG 2 9 9 6 26 GG 0 3 0 1 4 0.040 0.093 1.686 0.195 0.323 024717 AA 25 22 21 18 86 AG 1 0 1 4 6 GG 0 0 0 1 1 0.010 0.000 0.012 1.252 4.351 024799 AA 25 20 22 23 90 AC 1 0 0 0 1 CC 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 024947 CC 1 0 0 0 1 CT 6 0 1 0 7 TT 20 22 21 23 86 0.386 0.000 0.012 0.000 3.152 025495 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 26 21 21 24 92 0.010 0.000 0.000 0.000 0.003 025912 AA 0 0 0 0 0 AT 1 0 0 0 1 TT 26 21 21 23 91 0.010 0.000 0.000 0.000 0.003 025975 GG 13 21 20 23 77 GT 7 0 1 0 8 TT 3 0 0 0 3 1.431 0.000 0.012 0.000 12.653 026121 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 24 21 21 23 89 0.010 0.000 0.000 0.000 0.003 027514 CC 13 21 21 21 76 CT 8 0 1 0 9 TT 5 0 0 0 5 2.667 0.000 0.012 0.000 19.916 027721 AA 26 20 21 21 88 AG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 031846 AA 27 21 21 22 91 AG 0 0 0 2 2 GG 0 0 0 0 0 0.000 0.000 0.000 0.045 0.011 031849 GG 0 0 0 0 0 GT 2 0 0 0 2 TT 25 20 21 24 90 0.040 0.000 0.000 0.000 0.011 032314 AA 27 21 20 24 92 AG 0 1 1 0 2 GG 0 0 0 0 0 0.000 0.012 0.012 0.000 0.011 032533 AA 26 21 21 24 92 AC 1 0 0 0 1 CC 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 032627 CC 8 0 0 0 8 CG 13 0 2 0 15 GG 6 22 19 24 71 0.027 0.000 0.053 0.000 16.628 032825 GG 0 0 0 0 0 GT 0 0 0 1 1 TT 27 22 21 23 93 0.000 0.000 0.000 0.011 0.003 032859 CC 26 22 21 24 93 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 032941 AA 0 1 0 1 2 AG 1 6 6 6 19 GG 26 15 15 17 73 0.010 0.153 0.583 0.240 0.325 033148 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 21 23 92 0.010 0.000 0.000 0.000 0.003 033256 -- 0 0 0 0 0 +- 2 0 0 0 2 ++ 23 21 18 23 85 0.043 0.000 0.000 0.000 0.012 033285 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 26 22 21 23 92 0.010 0.000 0.000 0.000 0.003 033589 AA 26 22 20 24 92 AG 0 0 1 0 1 GG 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 033743 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 26 22 21 24 93 0.010 0.000 0.000 0.000 0.003 034006 CC 0 1 1 1 3 CT 1 6 5 6 18 TT 26 15 15 17 73 0.010 0.153 0.429 0.240 1.849 034713 AA 26 10 12 17 65 AG 1 9 8 6 24 GG 0 3 1 1 5 0.010 0.177 0.053 0.240 1.797 035067 AA 7 0 0 0 7 AG 14 0 2 0 16 GG 4 20 18 22 64 0.465 0.000 0.055 0.000 10.999 035110 GG 0 0 0 0 0 GT 0 1 0 0 1 TT 26 19 20 23 88 0.000 0.013 0.000 0.000 0.003 035519 AA 26 21 21 23 91 AG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 035555 AA 0 0 0 0 0 AG 3 0 0 0 3 GG 23 22 21 23 89 0.097 0.000 0.000 0.000 0.025 035685 CC 0 0 0 0 0 CT 6 13 7 5 31 TT 20 9 12 18 59 0.442 3.869 0.969 0.342 3.896 042366 AA 0 0 0 0 0 AG 0 0 1 1 2 GG 26 18 15 14 73 0.000 0.000 0.017 0.018 0.014 042466 AA 2 5 6 9 22 AG 9 10 6 5 30 GG 15 3 6 2 26 0.154 0.281 2.000 0.825 4.081 042546 AA 26 20 17 16 79 AT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 042558 CC 27 19 19 19 84 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.013 0.000 0.000 0.003 042832 AA 13 4 3 1 21 AT 6 9 8 3 26 TT 2 4 5 7 18 0.948 0.059 0.004 0.550 2.556 043131 AA 0 0 0 0 0 AG 2 1 0 5 8 GG 25 20 22 19 86 0.040 0.012 0.000 0.324 0.186 043643 CC 9 0 2 0 11 CG 9 13 8 5 35 GG 9 8 12 19 48 3.000 4.220 0.153 0.324 1.326 043914 AA 0 1 0 1 2 AG 2 6 6 6 20 GG 25 15 16 17 73 0.040 0.153 0.548 0.240 0.203 044080 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 27 21 21 24 93 0.000 0.012 0.000 0.000 0.003 044171 CC 27 22 21 24 94 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 044186 AA 0 1 0 1 2 AC 1 5 6 6 18 CC 26 15 16 17 74 0.010 0.429 0.548 0.240 0.506 044257 CC 27 22 22 23 94 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 044269 CC 27 21 22 23 93 CG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 044302 -- 3 5 7 11 26 +- 8 10 9 7 34 ++ 16 4 4 6 30 1.411 0.059 0.126 3.654 5.312 044422 AA 19 17 15 19 70 AG 1 0 0 0 1 GG 0 0 0 0 0 0.013 0.000 0.000 0.000 0.004 044574 CC 26 22 22 23 93 CT 1 0 0 1 2 TT 0 0 0 0 0 0.010 0.000 0.000 0.011 0.011 044701 AA 0 1 0 1 2 AG 1 6 6 6 19 GG 26 14 16 17 73 0.010 0.114 0.548 0.240 0.325 045143 AA 0 0 0 0 0 AG 0 2 1 0 3 GG 24 15 18 21 78 0.000 0.066 0.014 0.000 0.029 045438 AA 0 1 0 1 2 AG 1 4 4 5 14 GG 22 8 14 15 59 0.011 0.231 0.281 0.429 1.012 052337 AA 26 19 16 20 81 AG 0 1 1 0 2 GG 0 0 0 0 0 0.000 0.013 0.016 0.000 0.012 052747 AA 27 20 19 23 89 AT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 052783 -- 0 0 0 0 0 +- 0 0 1 0 1 ++ 27 19 16 19 81 0.000 0.000 0.016 0.000 0.003 053023 -- 0 0 0 0 0 +- 1 0 0 0 1 ++ 24 18 13 22 77 0.010 0.000 0.000 0.000 0.003 053514 CC 0 1 0 1 2 CT 1 4 5 5 15 TT 24 13 13 15 65 0.010 0.720 0.468 0.429 0.940 053533 CC 25 18 19 21 83 CG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.014 0.000 0.000 0.003 053550 CC 1 0 0 0 1 CT 1 0 0 0 1 TT 22 16 19 21 78 9.967 0.000 0.000 0.000 34.879 053576 AA 24 16 19 18 77 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.014 0.003 053966 CC 0 0 0 0 0 CT 5 0 0 0 5 TT 20 19 20 20 79 0.309 0.000 0.000 0.000 0.079 054143 CC 0 1 0 1 2 CG 1 5 6 5 17 GG 25 13 14 17 69 0.010 0.294 0.623 0.571 0.575 054294 AA 0 0 1 0 1 AG 5 11 6 5 27 GG 21 9 12 18 60 0.294 2.878 0.048 0.342 1.158 054406 CC 3 18 8 21 50 CT 12 1 1 0 14 TT 8 0 0 0 8 0.209 0.014 0.031 0.000 12.134 054569 AA 27 15 11 20 73 AG 0 0 0 2 2 GG 0 0 0 0 0 0.000 0.000 0.000 0.050 0.014 054840 AA 26 22 22 24 94 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 054966 AA 4 9 12 18 43 AG 8 13 7 6 34 GG 15 0 3 0 18 2.262 3.869 1.223 0.490 5.067 054998 CC 0 0 0 1 1 CG 1 0 1 5 7 GG 26 22 21 18 87 0.010 0.000 0.012 0.644 3.201 055090 GG 26 15 16 17 74 GT 1 6 6 6 19 TT 0 1 0 1 2 0.010 0.153 0.548 0.240 0.344 055101 GG 16 4 5 6 31 GT 8 13 10 9 40 TT 3 5 7 9 24 1.411 0.747 0.153 1.361 2.233 055408 AA 0 1 0 1 2 AT 1 2 5 5 13 TT 20 11 6 16 53 0.012 2.431 0.952 0.499 1.080 055718 AA 0 0 0 0 0 AT 1 6 0 0 7 TT 24 16 19 22 81 0.010 0.548 0.000 0.000 0.151 055732 AA 24 15 14 16 69 AG 1 6 6 5 18 GG 0 1 0 1 2 0.010 0.153 0.623 0.499 0.393 055882 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 25 22 21 22 90 0.000 0.000 0.000 0.011 0.003 055923 AA 24 22 21 22 89 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 056141 CC 0 0 0 0 0 CT 5 0 2 9 16 TT 19 22 19 9 69 0.324 0.000 0.053 2.000 0.918 060220 CC 0 0 0 0 0 CT 0 1 0 0 1 TT 22 17 19 23 81 0.000 0.015 0.000 0.000 0.003 060316 CC 0 0 0 0 0 CG 1 0 0 0 1 GG 20 19 18 24 81 0.012 0.000 0.000 0.000 0.003 060691 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 19 22 24 91 0.010 0.000 0.000 0.000 0.003 060805 AA 27 18 22 24 91 AG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.014 0.000 0.000 0.003 060818 AA 26 13 16 17 72 AG 1 5 6 6 18 GG 0 0 0 1 1 0.010 0.468 0.548 0.240 0.011 060903 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 25 18 22 24 89 0.010 0.000 0.000 0.000 0.003 061065 CC 27 21 22 22 92 CT 0 0 0 2 2 TT 0 0 0 0 0 0.000 0.000 0.000 0.045 0.011 061246 CC 3 5 7 8 23 CG 8 13 9 9 39 GG 16 4 4 6 30 1.411 0.747 0.126 1.028 1.994 061302 AA 27 21 21 24 93 AG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 061353 CC 25 15 15 17 72 CT 2 6 6 6 20 TT 0 1 0 1 2 0.040 0.153 0.583 0.240 0.188 061370 AA 27 22 20 23 92 AG 0 0 1 0 1 GG 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 062445 AA 25 19 21 23 88 AG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.013 0.000 0.000 0.003 062518 CC 0 0 0 0 0 CT 5 13 7 6 31 TT 21 8 13 18 60 0.294 4.220 0.900 0.490 3.835 062557 AA 0 0 0 0 0 AG 2 0 0 0 2 GG 24 21 21 24 90 0.042 0.000 0.000 0.000 0.011 062588 CC 3 5 5 9 22 CT 8 11 9 9 37 TT 15 3 4 6 28 1.236 0.555 0.000 1.361 1.838 062690 CC 0 0 0 0 0 CG 0 0 0 1 1 GG 25 21 18 23 87 0.000 0.000 0.000 0.011 0.003 062966 CC 25 15 15 17 72 CG 1 6 6 6 19 GG 0 1 0 1 2 0.010 0.153 0.583 0.240 0.306 063019 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 25 22 21 24 92 0.010 0.000 0.000 0.000 0.003 063115 AA 0 1 0 1 2 AG 1 6 6 6 19 GG 25 15 15 17 72 0.010 0.153 0.583 0.240 0.306 063491 AA 25 14 15 17 71 AC 1 6 6 6 19 CC 0 1 0 1 2 0.010 0.114 0.583 0.240 0.287 064003 AA 25 22 22 22 91 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 073015 CC 26 15 16 17 74 CG 1 6 6 6 19 GG 0 1 0 1 2 0.010 0.153 0.548 0.240 0.344 073037 AA 26 22 22 24 94 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 073056 AA 26 22 22 24 94 AT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 073124 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 073249 CC 24 22 22 24 92 CT 1 0 0 0 1 TT 1 0 0 0 1 10.859 0.000 0.000 0.000 41.103 073377 CC 0 0 0 1 1 CT 1 6 5 6 18 TT 25 15 16 16 72 0.010 0.583 0.383 0.195 0.011 073648 AA 5 0 0 0 5 AG 8 0 1 0 9 GG 13 22 20 23 78 2.667 0.000 0.012 0.000 20.476 073710 AA 27 16 18 24 85 AT 0 5 4 0 9 TT 0 1 0 0 1 0.000 0.499 0.220 0.000 1.644 073739 -- 0 0 0 0 0 +- 0 0 1 0 1 ++ 20 21 21 23 85 0.000 0.000 0.012 0.000 0.003 074318 CC 1 0 0 0 1 CT 6 0 1 0 7 TT 18 22 21 24 85 0.287 0.000 0.012 0.000 3.103 074642 CC 24 22 22 24 92 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 074706 CC 5 0 0 0 5 CT 7 0 1 0 8 TT 14 22 21 24 81 3.919 0.000 0.012 0.000 24.305 074892 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 18 20 20 23 81 0.014 0.000 0.000 0.000 0.003 075562 AA 0 0 0 1 1 AG 1 0 1 5 7 GG 22 22 21 17 82 0.011 0.000 0.012 0.571 2.958 076161 AA 5 22 20 22 69 AG 11 0 2 0 13 GG 7 0 0 0 7 0.030 0.000 0.050 0.000 16.642 076190 -- 0 0 0 0 0 +- 0 0 0 1 1 ++ 23 22 22 21 88 0.000 0.000 0.000 0.012 0.003 076694 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 25 22 22 24 93 0.010 0.000 0.000 0.000 0.003 076896 AA 0 0 0 0 0 AC 1 0 1 0 2 CC 26 22 21 23 92 0.010 0.000 0.012 0.000 0.011 076917 AA 25 22 22 23 92 AT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 077111 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 27 22 21 24 94 0.000 0.000 0.012 0.000 0.003 077194 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 077598 AA 9 2 3 1 15 AG 7 9 7 11 34 GG 3 4 7 10 24 0.626 0.737 0.279 0.889 0.214 084093 CC 25 22 22 23 92 CT 2 0 0 0 2 TT 0 0 0 0 0 0.040 0.000 0.000 0.000 0.011 084099 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 084895 AA 0 0 0 0 0 AT 1 0 0 0 1 TT 26 22 21 24 93 0.010 0.000 0.000 0.000 0.003 084896 AA 27 22 22 23 94 AT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 085328 AA 0 0 0 0 0 AC 1 0 0 0 1 CC 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 085707 CC 25 21 21 22 89 CT 2 0 0 0 2 TT 0 0 0 0 0 0.040 0.000 0.000 0.000 0.011 085776 CC 26 20 20 22 88 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 086658 -- 0 0 0 0 0 +- 1 0 0 0 1 ++ 25 20 18 24 87 0.010 0.000 0.000 0.000 0.003 086899 AA 22 22 21 24 89 AG 2 0 0 0 2 GG 0 0 0 0 0 0.045 0.000 0.000 0.000 0.011 086943 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 18 22 21 24 85 0.014 0.000 0.000 0.000 0.003 087017 AA 18 22 15 24 79 AG 0 0 6 0 6 GG 0 0 0 0 0 0.000 0.000 0.583 0.000 0.114 087245 AA 25 15 17 17 74 AG 1 6 5 6 18 GG 0 1 0 1 2 0.010 0.153 0.362 0.240 0.506 087289 CC 0 0 0 0 0 CT 2 0 0 0 2 TT 24 22 22 24 92 0.042 0.000 0.000 0.000 0.011 087666 CC 20 21 18 23 82 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 087694 AA 10 0 3 3 16 AG 9 13 7 6 35 GG 1 9 8 14 32 0.330 3.869 0.445 2.407 1.278 087933 AA 20 22 20 24 86 AG 1 0 0 0 1 GG 0 0 0 0 0 0.012 0.000 0.000 0.000 0.003 088021 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 088328 CC 26 22 22 23 93 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 088420 CC 24 22 22 23 91 CT 2 0 0 0 2 TT 0 0 0 0 0 0.042 0.000 0.000 0.000 0.011 088889 -- 15 6 5 2 28 +- 8 10 11 13 42 ++ 3 5 6 8 22 1.236 0.043 0.000 1.043 0.635 089177 AA 26 19 18 21 84 AG 0 0 1 0 1 GG 0 0 0 0 0 0.000 0.000 0.014 0.000 0.003 089656 CC 26 21 18 23 88 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 089715 AA 8 0 0 0 8 AG 13 0 2 0 15 GG 5 21 18 23 67 0.005 0.000 0.055 0.000 15.534 089750 AA 27 20 20 22 89 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 089905 GG 26 20 21 23 90 GT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 090546 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 25 18 14 17 74 0.010 0.000 0.000 0.000 0.003 090966 GG 0 0 0 0 0 GT 0 0 0 1 1 TT 26 19 15 16 76 0.000 0.000 0.000 0.016 0.003 091112 AA 25 17 17 14 73 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 093343 AA 25 21 22 23 91 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 093558 AA 25 21 21 23 90 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 093836 -- 24 17 18 21 80 +- 1 0 0 0 1 ++ 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 094466 CC 5 21 20 22 68 CG 13 0 2 0 15 GG 8 0 0 0 8 0.005 0.000 0.050 0.000 15.808 094510 CC 0 0 0 0 0 CT 0 1 0 0 1 TT 24 20 22 22 88 0.000 0.012 0.000 0.000 0.003 094855 CC 0 0 0 0 0 CT 0 1 0 0 1 TT 27 18 20 21 86 0.000 0.014 0.000 0.000 0.003 094969 AA 27 20 20 20 87 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.012 0.003 095010 AA 0 0 0 1 1 AG 1 0 1 5 7 GG 26 20 19 15 80 0.010 0.000 0.013 0.429 2.861 104229 CC 0 0 0 0 0 CG 1 0 0 0 1 GG 24 22 22 21 89 0.010 0.000 0.000 0.000 0.003 104256 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 23 21 22 21 87 0.011 0.000 0.000 0.000 0.003 104257 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 24 22 22 21 89 0.010 0.000 0.000 0.000 0.003 104617 AA 0 0 0 0 0 AG 2 0 0 0 2 GG 23 19 22 23 87 0.043 0.000 0.000 0.000 0.011 104621 CC 25 19 22 20 86 CT 0 0 0 3 3 TT 0 0 0 0 0 0.000 0.000 0.000 0.112 0.026 104939 CC 24 19 14 21 78 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.013 0.000 0.000 0.003 105249 AA 0 0 0 0 0 AC 0 0 0 3 3 CC 27 22 19 20 88 0.000 0.000 0.000 0.112 0.026 105745 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 17 21 16 80 0.010 0.000 0.000 0.000 0.003 105752 GG 0 0 0 0 0 GT 0 0 0 1 1 TT 27 18 21 15 81 0.000 0.000 0.000 0.017 0.003 106013 CC 27 22 21 22 92 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 106910 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 107109 CC 0 0 0 0 0 CT 0 0 0 1 1 TT 27 22 22 23 94 0.000 0.000 0.000 0.011 0.003 107802 AA 23 21 22 21 87 AC 1 0 0 0 1 CC 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 108130 CC 13 0 2 1 16 CT 9 11 6 5 31 TT 5 9 6 14 34 1.956 2.878 0.062 0.360 3.074 108168 AA 0 2 0 0 2 AG 2 8 7 6 23 GG 25 10 7 14 56 0.040 0.045 1.556 0.623 0.040 108186 -- 0 0 0 0 0 +- 0 0 0 2 2 ++ 27 19 14 18 78 0.000 0.000 0.000 0.055 0.013 109208 AA 0 0 0 0 0 AG 0 0 0 3 3 GG 27 21 18 15 81 0.000 0.000 0.000 0.149 0.028 109714 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 27 21 15 18 81 0.000 0.000 0.017 0.000 0.003 109960 AA 24 22 20 23 89 AG 2 0 0 0 2 GG 0 0 0 0 0 0.042 0.000 0.000 0.000 0.011 109965 AA 21 12 9 18 60 AG 5 10 7 5 27 GG 0 0 4 0 4 0.294 1.903 1.284 0.342 0.183 110549 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 110924 AA 26 22 22 24 94 AT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 112297 AA 0 0 4 0 4 AG 1 9 6 0 16 GG 25 12 11 24 72 0.010 1.562 2.679 0.000 5.009 112442 AA 26 20 21 24 91 AG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 112689 AA 23 15 19 22 79 AG 1 0 0 0 1 GG 1 0 0 0 1 10.413 0.000 0.000 0.000 35.324 112996 AA 1 0 0 0 1 AC 1 0 0 0 1 CC 21 12 14 23 70 9.521 0.000 0.000 0.000 31.323 113105 -- 0 0 3 0 3 +- 1 7 5 0 13 ++ 24 12 11 24 71 0.010 0.969 2.466 0.000 4.679 113365 AA 25 20 20 24 89 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 113623 CC 25 21 20 21 87 CG 0 0 0 2 2 GG 0 0 0 0 0 0.000 0.000 0.000 0.048 0.011 113681 AA 0 0 0 0 0 AG 0 0 0 2 2 GG 25 20 20 21 86 0.000 0.000 0.000 0.048 0.012 113688 CC 0 0 0 0 0 CG 0 0 0 1 1 GG 25 20 20 22 87 0.000 0.000 0.000 0.011 0.003 113700 AA 0 0 0 0 0 AG 0 0 0 2 2 GG 25 21 20 21 87 0.000 0.000 0.000 0.048 0.011 113701 CC 0 0 0 0 0 CT 0 1 1 0 2 TT 25 20 19 23 87 0.000 0.012 0.013 0.000 0.011 113768 CC 0 0 0 0 0 CT 0 0 0 2 2 TT 25 21 20 21 87 0.000 0.000 0.000 0.048 0.011 113992 -- 26 21 20 21 88 +- 0 0 0 3 3 ++ 0 0 0 0 0 0.000 0.000 0.000 0.107 0.026 114193 AA 0 0 0 0 0 AT 0 1 0 0 1 TT 27 20 22 24 93 0.000 0.012 0.000 0.000 0.003 114338 AA 23 21 21 24 89 AG 3 0 0 0 3 GG 0 0 0 0 0 0.097 0.000 0.000 0.000 0.025 114402 CC 0 0 0 0 0 CT 0 0 0 3 3 TT 26 20 21 21 88 0.000 0.000 0.000 0.107 0.026 114447 CC 0 0 0 0 0 CG 0 0 0 3 3 GG 26 20 20 19 85 0.000 0.000 0.000 0.118 0.026 114547 CC 24 19 19 17 79 CG 0 0 0 3 3 GG 0 0 0 0 0 0.000 0.000 0.000 0.131 0.028 114638 -- 27 22 22 21 92 +- 0 0 0 3 3 ++ 0 0 0 0 0 0.000 0.000 0.000 0.107 0.024 114834 CC 19 9 7 5 40 CT 7 11 13 14 45 TT 1 2 2 5 10 0.120 0.279 1.333 0.667 0.260 114835 CC 0 0 0 0 0 CG 0 0 0 3 3 GG 27 22 22 21 92 0.000 0.000 0.000 0.107 0.024 114942 CC 0 0 0 0 0 CT 0 0 0 2 2 TT 27 22 22 21 92 0.000 0.000 0.000 0.048 0.011 118543 CC 0 0 0 0 0 CT 0 0 0 2 2 TT 27 22 21 21 91 0.000 0.000 0.000 0.048 0.011 118598 -- 26 22 21 21 90 +- 0 0 0 3 3 ++ 0 0 0 0 0 0.000 0.000 0.000 0.107 0.025 118719 CC 26 21 20 21 88 CT 0 1 1 0 2 TT 0 0 0 0 0 0.000 0.012 0.012 0.000 0.011 118814 -- 0 0 0 0 0 +- 0 0 0 3 3 ++ 26 21 21 21 89 0.000 0.000 0.000 0.107 0.025 118837 AA 0 0 0 0 0 AG 0 0 0 2 2 GG 26 22 21 21 90 0.000 0.000 0.000 0.048 0.011 118923 AA 26 22 20 21 89 AG 0 0 0 3 3 GG 0 0 0 0 0 0.000 0.000 0.000 0.107 0.025 119078 AA 0 0 0 0 0 AG 1 1 0 0 2 GG 22 21 20 22 85 0.011 0.012 0.000 0.000 0.012 119143 AA 0 0 0 0 0 AG 3 0 0 0 3 GG 20 22 18 22 82 0.112 0.000 0.000 0.000 0.027 119416 CC 0 0 0 0 0 CT 0 0 0 2 2 TT 27 22 21 21 91 0.000 0.000 0.000 0.048 0.011 119613 AA 27 22 21 20 90 AG 0 0 0 3 3 GG 0 0 0 0 0 0.000 0.000 0.000 0.112 0.025 119673 CC 0 0 0 0 0 CT 0 0 0 3 3 TT 27 22 21 20 90 0.000 0.000 0.000 0.112 0.025 119681 CC 1 3 0 1 5 CT 3 10 9 9 31 TT 23 9 12 13 57 3.099 0.007 1.562 0.130 0.084 119896 AA 25 22 21 21 89 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 119901 -- 0 0 0 0 0 +- 0 0 0 2 2 ++ 26 22 21 21 90 0.000 0.000 0.000 0.048 0.011 119983 AA 1 0 4 0 5 AT 6 10 7 5 28 TT 20 12 10 19 61 0.386 1.903 1.577 0.324 0.550 120361 AA 26 22 21 21 90 AC 0 0 0 3 3 CC 0 0 0 0 0 0.000 0.000 0.000 0.107 0.025 120581 -- 5 0 0 0 5 +- 10 1 1 0 12 ++ 11 21 19 23 74 0.914 0.012 0.013 0.000 13.109 120623 AA 8 21 19 23 71 AG 11 1 1 0 13 GG 7 0 0 0 7 0.605 0.012 0.013 0.000 17.192 120668 AA 25 22 20 23 90 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 120705 AA 0 0 0 0 0 AG 2 0 0 0 2 GG 22 21 21 22 86 0.045 0.000 0.000 0.000 0.012 120826 CC 26 22 21 24 93 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 120827 AA 21 12 10 18 61 AG 5 10 7 5 27 GG 1 0 4 1 6 0.868 1.903 1.577 0.644 1.504 120899 AA 0 0 0 0 0 AG 0 0 0 3 3 GG 25 22 21 20 88 0.000 0.000 0.000 0.112 0.026 121139 CC 0 0 0 0 0 CT 0 0 0 3 3 TT 25 22 21 20 88 0.000 0.000 0.000 0.112 0.026 121177 GG 25 22 21 20 88 GT 0 0 0 3 3 TT 0 0 0 0 0 0.000 0.000 0.000 0.112 0.026 121199 CC 0 0 0 0 0 CG 0 0 0 3 3 GG 25 22 21 20 88 0.000 0.000 0.000 0.112 0.026 121259 AA 0 0 0 0 0 AG 0 0 0 3 3 GG 25 22 21 20 88 0.000 0.000 0.000 0.112 0.026 121295 AA 0 0 0 0 0 AG 0 0 0 3 3 GG 25 22 21 20 88 0.000 0.000 0.000 0.112 0.026 122343 AA 24 10 12 19 65 AG 0 0 0 2 2 GG 0 0 0 0 0 0.000 0.000 0.000 0.053 0.015 122356 -- 19 9 11 12 51 +- 1 1 0 6 8 ++ 0 0 0 0 0 0.013 0.028 0.000 0.720 0.312 122394 CC 0 0 0 0 0 CG 1 0 0 0 1 GG 21 11 15 14 61 0.012 0.000 0.000 0.000 0.004 122956 AA 1 0 3 0 4 AG 5 6 6 5 22 GG 20 11 11 16 58 0.793 0.781 1.633 0.383 0.966 123942 AA 23 19 20 22 84 AG 0 0 1 2 3 GG 0 0 0 0 0 0.000 0.000 0.012 0.045 0.027 124019 CC 0 0 0 0 0 CT 0 0 1 0 1 TT 23 18 19 24 84 0.000 0.000 0.013 0.000 0.003 124292 -- 24 20 21 23 88 +- 1 0 0 0 1 ++ 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 124908 CC 1 0 0 0 1 CG 4 0 0 0 4 GG 22 21 22 22 87 1.688 0.000 0.000 0.000 8.890 124983 CC 2 0 0 0 2 CT 5 0 0 0 5 TT 20 22 22 24 88 3.000 0.000 0.000 0.000 16.505 125156 AA 15 2 1 0 18 AC 11 10 11 3 35 CC 1 10 10 21 42 0.354 0.050 0.889 0.107 4.307 125166 AA 22 9 12 24 67 AT 4 12 9 0 25 TT 1 1 1 0 3 1.688 1.455 0.182 0.000 0.125 125190 GG 0 0 0 0 0 GT 0 1 0 0 1 TT 27 21 22 24 94 0.000 0.012 0.000 0.000 0.003 125218 CC 0 0 0 0 0 CT 0 1 0 0 1 TT 27 21 22 24 94 0.000 0.012 0.000 0.000 0.003 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000986: CAAG 012814: T 015881: aaata 024286: actt 033256: ac 044302: A 052783: aa 053023: t 073739: t 076190: TT 086658: GA 088889: TTGTA 093836: TC 108186: AT 113105: AAAG 113992: A 114638: TCTA 118598: GGTTAGGGATGCTGACCCCCTGT 118814: tatat 119901: attt 120581: G 122356: G 124292: t