Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000093 00000 ------------ A 1.00 0.88 1.00 0.95 1.00 0.97 G 0.00 0.12 0.00 0.05 0.00 0.03 0000 --- --- --- --- 000187 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000322 00000 ------------ G 0.83 0.96 0.25 0.64 0.52 0.59 T 0.17 0.04 0.75 0.36 0.48 0.41 0000 --- --- --- --- 000586 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000587 00000 ------------ C 1.00 0.92 0.95 0.98 0.98 0.97 T 0.00 0.08 0.05 0.02 0.02 0.03 0000 --- --- --- --- 000675 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000764 00042 5' UTR - 0.97 0.96 1.00 1.00 1.00 0.99 + 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000915 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 000920 00000 ------------ G 0.97 0.96 1.00 1.00 1.00 0.99 T 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000993 00000 ------------ G 1.00 0.92 0.97 0.98 0.98 0.97 T 0.00 0.08 0.03 0.02 0.02 0.03 0000 --- --- --- --- 001086 00000 ------------ T 1.00 1.00 1.00 0.91 1.00 0.98 G 0.00 0.00 0.00 0.09 0.00 0.02 0000 --- --- --- --- 001110 00000 ------------ - 0.00 0.00 0.00 0.02 0.00 0.01 + 1.00 1.00 1.00 0.98 1.00 0.99 0000 --- --- --- --- 001220 00000 ------------ A 1.00 1.00 1.00 0.95 0.98 0.98 T 0.00 0.00 0.00 0.05 0.02 0.02 0000 --- --- --- --- 001357 00000 ------------ C 0.97 1.00 1.00 1.00 0.98 0.99 A 0.03 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 001580 00000 ------------ C 0.91 0.95 1.00 0.98 1.00 0.98 T 0.09 0.05 0.00 0.02 0.00 0.02 0000 --- --- --- --- 001704 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 001789 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 001924 00000 ------------ A 1.00 1.00 1.00 0.95 1.00 0.99 G 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 002139 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 002156 00000 ------------ C 1.00 0.92 1.00 0.97 1.00 0.98 T 0.00 0.08 0.00 0.03 0.00 0.02 0000 --- --- --- --- 002175 00000 ------------ T 0.94 1.00 1.00 1.00 1.00 0.99 C 0.06 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002404 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 002423 00000 ------------ - 0.00 0.00 0.00 0.00 0.02 0.01 + 1.00 1.00 1.00 1.00 0.98 0.99 0000 --- --- --- --- 002652 00000 ------------ G 0.92 0.96 0.95 0.95 0.98 0.96 C 0.08 0.04 0.05 0.05 0.02 0.04 0000 --- --- --- --- 002943 00000 ------------ G 0.86 0.54 1.00 0.98 0.98 0.91 T 0.14 0.46 0.00 0.02 0.02 0.09 0000 --- --- --- --- 003809 00184 NON-SYN G 0.92 0.96 1.00 0.98 1.00 0.98 C 0.08 0.04 0.00 0.02 0.00 0.02 0008 GCC CCC ALA(A) PRO(P) 004324 00699 SYNON G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0179 ACG ACA THR(T) THR(T) 004589 00964 NON-SYN G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0268 GCC ACC ALA(A) THR(T) 004668 01043 NON-SYN A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0294 GAC GGC ASP(D) GLY(G) 004706 01081 SYNON T 1.00 1.00 1.00 1.00 0.85 0.96 C 0.00 0.00 0.00 0.00 0.15 0.04 0307 TTG CTG LEU(L) LEU(L) 005008 01383 SYNON G 0.80 0.75 1.00 0.89 0.83 0.87 A 0.20 0.25 0.00 0.11 0.17 0.13 0407 ACG ACA THR(T) THR(T) 005215 01590 SYNON C 0.90 1.00 1.00 1.00 1.00 0.98 T 0.10 0.00 0.00 0.00 0.00 0.02 0476 ATC ATT ILE(I) ILE(I) 005223 01598 NON-SYN C 0.97 0.92 1.00 1.00 1.00 0.98 T 0.03 0.08 0.00 0.00 0.00 0.02 0479 ACG ATG THR(T) MET(M) 005230 01605 SYNON C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0481 GAC GAT ASP(D) ASP(D) 005265 01640 NON-SYN T 0.97 1.00 0.61 0.93 0.85 0.85 C 0.03 0.00 0.39 0.07 0.15 0.15 0493 ATG ACG MET(M) THR(T) 005460 01835 NON-SYN A 1.00 0.92 0.95 0.98 0.98 0.97 C 0.00 0.08 0.05 0.02 0.02 0.03 0558 GAA GCA GLU(E) ALA(A) 005591 01966 NON-SYN G 0.96 1.00 0.70 0.75 0.67 0.77 A 0.04 0.00 0.30 0.25 0.33 0.23 0602 GAG AAG GLU(E) LYS(K) 005766 02141 3' UTR - 0.17 0.23 0.00 0.09 0.17 0.12 + 0.83 0.77 1.00 0.91 0.83 0.88 0000 --- --- --- --- 005850 02225 3' UTR G 1.00 0.88 1.00 0.95 1.00 0.97 A 0.00 0.12 0.00 0.05 0.00 0.03 0000 --- --- --- --- 005896 02271 3' UTR G 1.00 0.88 1.00 0.93 1.00 0.97 A 0.00 0.12 0.00 0.07 0.00 0.03 0000 --- --- --- --- 006906 00000 ------------ G 1.00 0.91 1.00 1.00 1.00 0.99 A 0.00 0.09 0.00 0.00 0.00 0.01 0000 --- --- --- --- 006933 00000 ------------ C 0.96 0.86 1.00 1.00 1.00 0.98 T 0.04 0.14 0.00 0.00 0.00 0.02 0000 --- --- --- --- 007195 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 007296 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 007309 00000 ------------ T 1.00 0.92 1.00 1.00 1.00 0.99 G 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007408 00000 ------------ T 1.00 0.88 1.00 0.95 1.00 0.97 C 0.00 0.12 0.00 0.05 0.00 0.03 0000 --- --- --- --- 007414 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007518 00000 ------------ - 0.00 0.00 0.00 0.00 0.02 0.01 + 1.00 1.00 1.00 1.00 0.98 0.99 0000 --- --- --- --- 007553 00000 ------------ A 0.96 1.00 1.00 0.98 1.00 0.99 G 0.04 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 007556 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000764: TGGGGGG 001110: AAGGCGGGGTAAGGGG 002423: AG 005766: C 007518: CTGT