Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000064 00000 ------------ T 1.00 1.00 1.00 0.93 0.98 0.97 G 0.00 0.00 0.00 0.07 0.02 0.03 0000 --- --- --- --- 000237 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000450 00000 ------------ C 1.00 0.96 0.93 1.00 0.98 0.97 T 0.00 0.04 0.07 0.00 0.02 0.03 0000 --- --- --- --- 000590 00000 ------------ A 0.90 0.95 1.00 1.00 1.00 0.98 G 0.10 0.05 0.00 0.00 0.00 0.02 0000 --- --- --- --- 000774 00000 ------------ G 1.00 1.00 0.92 1.00 0.97 0.98 A 0.00 0.00 0.08 0.00 0.03 0.02 0000 --- --- --- --- 000785 00000 ------------ G 0.95 1.00 1.00 1.00 1.00 0.99 A 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000802 00000 ------------ G 0.95 0.94 1.00 0.93 0.97 0.96 A 0.05 0.06 0.00 0.07 0.03 0.04 0000 --- --- --- --- 000894 00000 ------------ A 0.73 0.40 0.68 0.72 0.96 0.74 C 0.27 0.60 0.32 0.28 0.04 0.26 0000 --- --- --- --- 001020 00000 ------------ C 0.81 0.96 1.00 1.00 1.00 0.97 T 0.19 0.04 0.00 0.00 0.00 0.03 0000 --- --- --- --- 001066 00000 ------------ T 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001530 00000 ------------ G 1.00 0.90 1.00 1.00 1.00 0.99 A 0.00 0.10 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001746 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001819 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001901 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 002022 00044 NON-SYN C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0010 TCT TGT SER(S) CYS(C) 002350 00372 SYNON C 0.91 0.94 1.00 1.00 1.00 0.98 T 0.09 0.06 0.00 0.00 0.00 0.02 0119 TTC TTT PHE(F) PHE(F) 002565 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002618 00000 ------------ G 1.00 0.92 1.00 1.00 1.00 0.99 C 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002797 00000 ------------ G 0.77 0.46 0.67 0.75 0.93 0.74 A 0.23 0.54 0.33 0.25 0.07 0.26 0000 --- --- --- --- 002842 00000 ------------ G 0.97 1.00 0.98 0.98 1.00 0.98 A 0.03 0.00 0.02 0.02 0.00 0.02 0000 --- --- --- --- 003161 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 003177 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 003257 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 003287 00000 ------------ C 0.96 0.79 0.80 0.78 0.98 0.86 T 0.04 0.21 0.20 0.23 0.02 0.14 0000 --- --- --- --- 003338 00000 ------------ T 1.00 1.00 0.90 1.00 0.98 0.97 C 0.00 0.00 0.10 0.00 0.02 0.03 0000 --- --- --- --- 003512 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 003542 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 003550 00000 ------------ C 0.93 0.83 0.81 0.89 1.00 0.89 G 0.07 0.17 0.19 0.11 0.00 0.11 0000 --- --- --- --- 003556 00000 ------------ T 0.96 0.96 0.98 1.00 1.00 0.98 C 0.04 0.04 0.02 0.00 0.00 0.02 0000 --- --- --- --- 003696 00000 ------------ G 1.00 0.92 0.82 0.85 1.00 0.91 A 0.00 0.08 0.17 0.15 0.00 0.09 0000 --- --- --- --- 004036 00000 ------------ G 0.93 0.79 0.82 0.80 0.98 0.87 A 0.07 0.21 0.18 0.20 0.02 0.13 0000 --- --- --- --- 004223 00000 ------------ T 0.93 0.73 0.88 0.95 0.96 0.91 C 0.07 0.27 0.12 0.05 0.04 0.09 0000 --- --- --- --- 004483 00000 ------------ C 0.96 0.92 1.00 1.00 1.00 0.98 G 0.04 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 004625 00000 ------------ T 0.73 0.46 0.68 0.76 0.94 0.74 C 0.27 0.54 0.32 0.24 0.06 0.26 0000 --- --- --- --- 004751 00000 ------------ G 1.00 1.00 1.00 0.93 0.98 0.98 C 0.00 0.00 0.00 0.07 0.02 0.02 0000 --- --- --- --- 004773 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 004778 00000 ------------ T 1.00 0.92 1.00 1.00 1.00 0.99 C 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 004788 00000 ------------ C 0.71 0.46 0.68 0.78 0.94 0.74 T 0.29 0.54 0.32 0.23 0.06 0.26 0000 --- --- --- --- 004894 00000 ------------ - 0.00 0.00 0.00 0.02 0.00 0.01 + 1.00 1.00 1.00 0.98 1.00 0.99 0000 --- --- --- --- 004936 00000 ------------ - 0.04 0.00 0.00 0.00 0.00 0.01 + 0.96 1.00 1.00 1.00 1.00 0.99 0000 --- --- --- --- 005183 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 005353 00000 ------------ C 0.96 0.88 1.00 1.00 1.00 0.98 T 0.04 0.12 0.00 0.00 0.00 0.02 0000 --- --- --- --- 005368 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 005401 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 137659 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 137753 00000 ------------ T 0.92 0.92 1.00 1.00 1.00 0.98 G 0.08 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 137782 00000 ------------ C 1.00 0.92 1.00 1.00 1.00 0.99 A 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 138065 00000 ------------ T 1.00 0.92 1.00 1.00 1.00 0.99 C 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 138180 00000 ------------ G 1.00 1.00 1.00 0.97 1.00 0.99 T 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 138190 00000 ------------ C 0.88 0.92 0.68 0.72 0.88 0.80 T 0.12 0.08 0.32 0.28 0.12 0.20 0000 --- --- --- --- 138201 00000 ------------ A 0.88 0.92 0.68 0.72 0.88 0.80 G 0.12 0.08 0.32 0.28 0.12 0.20 0000 --- --- --- --- 138473 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 138629 00669 SYNON T 1.00 1.00 1.00 0.95 1.00 0.99 G 0.00 0.00 0.00 0.05 0.00 0.01 0218 GTT GTG VAL(V) VAL(V) 138668 00708 SYNON T 1.00 1.00 0.98 1.00 0.92 0.97 C 0.00 0.00 0.02 0.00 0.08 0.03 0231 GGT GGC GLY(G) GLY(G) 138683 00723 SYNON C 1.00 1.00 1.00 0.95 1.00 0.99 T 0.00 0.00 0.00 0.05 0.00 0.01 0236 ACC ACT THR(T) THR(T) 139241 00000 ------------ A 1.00 1.00 1.00 0.97 1.00 0.99 T 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 139337 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 139338 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 139352 00000 ------------ G 0.70 0.58 1.00 0.97 1.00 0.89 A 0.30 0.42 0.00 0.03 0.00 0.11 0000 --- --- --- --- 139442 00000 ------------ A 0.20 0.29 0.73 0.75 0.71 0.59 G 0.80 0.71 0.27 0.25 0.29 0.41 0000 --- --- --- --- 139622 00000 ------------ G 0.92 0.92 0.95 0.93 1.00 0.95 T 0.08 0.08 0.05 0.07 0.00 0.05 0000 --- --- --- --- 139702 00000 ------------ G 0.19 0.29 0.73 0.75 0.70 0.59 A 0.81 0.71 0.27 0.25 0.30 0.41 0000 --- --- --- --- 140071 00000 ------------ C 1.00 1.00 1.00 0.98 0.98 0.99 A 0.00 0.00 0.00 0.02 0.02 0.01 0000 --- --- --- --- 140241 00000 ------------ T 1.00 1.00 1.00 1.00 0.96 0.99 C 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 140814 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 141554 00000 ------------ A 0.95 1.00 1.00 1.00 1.00 0.99 T 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 141682 00000 ------------ C 1.00 0.88 1.00 1.00 1.00 0.99 G 0.00 0.12 0.00 0.00 0.00 0.01 0000 --- --- --- --- 142089 00000 ------------ G 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 142162 00000 ------------ G 0.20 0.29 0.76 0.75 0.77 0.61 A 0.80 0.71 0.24 0.25 0.23 0.39 0000 --- --- --- --- 142294 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 142391 00000 ------------ G 0.97 1.00 0.98 0.91 1.00 0.97 A 0.03 0.00 0.02 0.09 0.00 0.03 0000 --- --- --- --- 142413 00000 ------------ T 0.93 1.00 1.00 1.00 1.00 0.99 C 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 143140 00000 ------------ G 0.79 1.00 0.81 0.93 0.77 0.85 A 0.21 0.00 0.19 0.07 0.23 0.15 0000 --- --- --- --- 143272 00000 ------------ A 0.96 1.00 0.95 0.91 1.00 0.96 C 0.04 0.00 0.05 0.09 0.00 0.04 0000 --- --- --- --- 143622 00000 ------------ G 0.96 0.96 1.00 1.00 1.00 0.99 C 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 143662 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 144281 00000 ------------ A 0.96 1.00 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 144306 00000 ------------ A 0.85 0.92 0.67 0.75 0.87 0.80 G 0.15 0.08 0.33 0.25 0.13 0.20 0000 --- --- --- --- 144446 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 144572 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 144684 00000 ------------ T 0.93 0.83 1.00 1.00 1.00 0.97 C 0.07 0.17 0.00 0.00 0.00 0.03 0000 --- --- --- --- 144808 00000 ------------ C 0.50 0.58 0.82 0.91 0.80 0.76 G 0.50 0.42 0.18 0.09 0.20 0.24 0000 --- --- --- --- 144838 00000 ------------ G 0.86 0.92 0.70 0.75 0.87 0.81 C 0.14 0.08 0.30 0.25 0.13 0.19 0000 --- --- --- --- 145093 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 145423 00000 ------------ G 0.97 0.96 1.00 1.00 1.00 0.99 T 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 145486 00000 ------------ G 0.93 0.91 1.00 0.98 1.00 0.97 A 0.07 0.09 0.00 0.02 0.00 0.03 0000 --- --- --- --- 145494 00000 ------------ - 0.00 0.00 0.00 0.00 0.02 0.01 + 1.00 1.00 1.00 1.00 0.98 0.99 0000 --- --- --- --- 145561 00000 ------------ C 0.97 0.85 1.00 1.00 1.00 0.98 T 0.03 0.15 0.00 0.00 0.00 0.02 0000 --- --- --- --- 146284 00000 ------------ G 0.97 0.96 0.59 0.52 0.45 0.65 A 0.03 0.04 0.41 0.48 0.55 0.35 0000 --- --- --- --- 146711 00000 ------------ A 0.70 0.58 1.00 0.98 1.00 0.89 G 0.30 0.42 0.00 0.02 0.00 0.11 0000 --- --- --- --- 148296 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 148348 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 148359 00000 ------------ G 0.97 0.96 0.60 0.50 0.42 0.63 A 0.03 0.04 0.40 0.50 0.58 0.37 0000 --- --- --- --- 148367 00000 ------------ C 0.70 0.58 1.00 0.98 1.00 0.89 T 0.30 0.42 0.00 0.02 0.00 0.11 0000 --- --- --- --- 148456 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 148595 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 149259 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 149699 00000 ------------ C 0.96 0.92 1.00 0.98 1.00 0.98 T 0.04 0.08 0.00 0.02 0.00 0.02 0000 --- --- --- --- 149766 00000 ------------ C 0.89 0.88 0.91 0.84 1.00 0.91 G 0.11 0.12 0.09 0.16 0.00 0.09 0000 --- --- --- --- 149776 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 150358 00000 ------------ G 1.00 0.92 1.00 1.00 1.00 0.99 A 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 150391 00000 ------------ A 0.93 0.92 1.00 0.98 1.00 0.97 G 0.07 0.08 0.00 0.02 0.00 0.03 0000 --- --- --- --- 339249 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 339301 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 339391 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 339416 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 339437 00000 ------------ T 1.00 1.00 0.89 0.90 0.83 0.91 C 0.00 0.00 0.11 0.10 0.17 0.09 0000 --- --- --- --- 339620 00000 ------------ C 0.93 0.96 1.00 1.00 1.00 0.98 T 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 339629 00000 ------------ T 0.93 0.96 1.00 1.00 1.00 0.98 C 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 340581 00809 NON-SYN T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0265 ATT ACT ILE(I) THR(T) 341010 00000 ------------ A 0.87 0.86 0.75 0.85 0.97 0.86 G 0.13 0.14 0.25 0.15 0.03 0.14 0000 --- --- --- --- 341218 01025 FRAME SHIFT - 0.00 0.00 0.00 0.02 0.00 0.01 + 1.00 1.00 1.00 0.98 1.00 0.99 0337 T-A TCA --- --- 341240 00000 ------------ G 0.93 0.96 0.61 0.55 0.96 0.78 A 0.07 0.04 0.39 0.45 0.04 0.22 0000 --- --- --- --- 341387 00000 ------------ T 1.00 0.92 1.00 1.00 1.00 0.99 C 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 341806 00000 ------------ - 0.00 0.00 0.00 0.00 0.05 0.01 + 1.00 1.00 1.00 1.00 0.95 0.99 0000 --- --- --- --- 341898 00000 ------------ G 0.93 1.00 1.00 1.00 1.00 0.99 T 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 341900 00000 ------------ C 0.93 1.00 1.00 1.00 1.00 0.99 T 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 342096 00000 ------------ G 0.90 0.88 1.00 1.00 1.00 0.97 C 0.10 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 342194 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 342253 00000 ------------ A 0.93 0.96 0.75 0.66 0.98 0.84 T 0.07 0.04 0.25 0.34 0.02 0.16 0000 --- --- --- --- 342436 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 342445 00000 ------------ A 0.93 1.00 1.00 1.00 1.00 0.99 G 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 342585 01100 NON-SYN T 1.00 1.00 0.89 0.91 0.81 0.91 A 0.00 0.00 0.11 0.09 0.19 0.09 0362 TTC TAC PHE(F) TYR(Y) 342603 01118 NON-SYN G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0368 GGC GAC GLY(G) ASP(D) 343016 00000 ------------ A 0.63 0.92 0.59 0.59 0.31 0.57 G 0.37 0.08 0.41 0.41 0.69 0.43 0000 --- --- --- --- 343186 00000 ------------ - 0.27 0.60 0.16 0.11 0.27 0.24 + 0.73 0.40 0.84 0.89 0.73 0.76 0000 --- --- --- --- 343384 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 343451 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 343502 00000 ------------ A 0.97 0.88 1.00 1.00 1.00 0.98 C 0.03 0.12 0.00 0.00 0.00 0.02 0000 --- --- --- --- 343621 00000 ------------ G 0.83 0.96 0.76 0.66 0.98 0.83 A 0.17 0.04 0.24 0.34 0.02 0.17 0000 --- --- --- --- 343739 00000 ------------ T 0.57 0.83 0.60 0.59 0.33 0.55 C 0.43 0.17 0.40 0.41 0.67 0.45 0000 --- --- --- --- 343935 00000 ------------ A 0.90 0.92 0.81 0.86 0.98 0.89 G 0.10 0.08 0.19 0.14 0.02 0.11 0000 --- --- --- --- 344180 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 473404 00000 ------------ T 0.67 0.42 1.00 1.00 1.00 0.87 C 0.33 0.58 0.00 0.00 0.00 0.13 0000 --- --- --- --- 473521 00000 ------------ G 0.90 0.92 1.00 1.00 1.00 0.97 A 0.10 0.08 0.00 0.00 0.00 0.03 0000 --- --- --- --- 473601 00000 ------------ A 0.64 0.42 1.00 1.00 1.00 0.87 G 0.36 0.58 0.00 0.00 0.00 0.13 0000 --- --- --- --- 473907 00000 ------------ - 0.00 0.12 0.00 0.00 0.00 0.02 + 1.00 0.88 1.00 1.00 1.00 0.98 0000 --- --- --- --- 474022 00000 ------------ T 1.00 1.00 0.98 0.98 1.00 0.99 A 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 474032 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 474069 00000 ------------ G 1.00 1.00 1.00 1.00 0.96 0.99 A 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 474617 00000 ------------ - 0.03 0.00 0.00 0.00 0.02 0.01 + 0.97 1.00 1.00 1.00 0.98 0.99 0000 --- --- --- --- 474870 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 474965 00000 ------------ C 0.83 0.88 0.84 0.77 0.62 0.77 T 0.17 0.12 0.16 0.23 0.38 0.23 0000 --- --- --- --- 475081 00000 ------------ C 0.75 0.75 0.64 0.68 0.92 0.75 G 0.25 0.25 0.36 0.32 0.08 0.25 0000 --- --- --- --- 475130 00000 ------------ C 0.86 0.92 0.93 1.00 1.00 0.95 A 0.14 0.08 0.07 0.00 0.00 0.05 0000 --- --- --- --- 475264 01303 NON-SYN C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0430 CTT TTT LEU(L) PHE(F) 475409 00000 ------------ C 1.00 1.00 0.98 0.98 0.98 0.98 A 0.00 0.00 0.02 0.02 0.02 0.02 0000 --- --- --- --- 475548 00000 ------------ - 0.33 0.08 0.45 0.32 0.10 0.27 + 0.67 0.92 0.55 0.68 0.90 0.73 0000 --- --- --- --- 475578 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 475779 00000 ------------ C 0.68 0.92 0.55 0.68 0.89 0.73 T 0.32 0.08 0.45 0.32 0.11 0.27 0000 --- --- --- --- 475860 00000 ------------ A 0.93 0.83 1.00 1.00 1.00 0.97 G 0.07 0.17 0.00 0.00 0.00 0.03 0000 --- --- --- --- 476188 00000 ------------ C 1.00 0.83 0.83 0.76 0.61 0.77 T 0.00 0.17 0.17 0.24 0.39 0.23 0000 --- --- --- --- 476213 00000 ------------ G 0.86 0.92 1.00 1.00 1.00 0.98 A 0.14 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 476523 00000 ------------ T 0.92 0.79 1.00 1.00 1.00 0.96 G 0.08 0.21 0.00 0.00 0.00 0.04 0000 --- --- --- --- 476896 00000 ------------ G 0.69 0.45 1.00 1.00 1.00 0.89 A 0.31 0.55 0.00 0.00 0.00 0.11 0000 --- --- --- --- 487444 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 487449 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 487844 00000 ------------ A 0.67 0.88 0.55 0.67 0.88 0.72 G 0.33 0.12 0.45 0.33 0.12 0.28 0000 --- --- --- --- 487862 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 488626 00000 ------------ T 0.93 0.79 1.00 1.00 1.00 0.96 C 0.07 0.21 0.00 0.00 0.00 0.04 0000 --- --- --- --- 488648 00000 ------------ G 0.67 0.88 0.55 0.68 0.88 0.72 C 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 488660 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 488747 00000 ------------ T 0.67 0.88 0.55 0.68 0.88 0.72 G 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 488922 00000 ------------ A 0.70 0.79 0.59 0.52 0.50 0.59 G 0.30 0.21 0.41 0.48 0.50 0.41 0000 --- --- --- --- 488960 00000 ------------ G 0.67 0.88 0.55 0.68 0.88 0.72 A 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 488996 00000 ------------ G 0.67 0.88 0.55 0.68 0.88 0.72 C 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 489160 00000 ------------ G 0.93 0.79 1.00 1.00 1.00 0.96 A 0.07 0.21 0.00 0.00 0.00 0.04 0000 --- --- --- --- 489446 00000 ------------ - 0.30 0.12 0.45 0.31 0.09 0.26 + 0.70 0.88 0.55 0.69 0.91 0.74 0000 --- --- --- --- 489451 00000 ------------ A 1.00 0.79 1.00 1.00 1.00 0.97 G 0.00 0.21 0.00 0.00 0.00 0.03 0000 --- --- --- --- 489579 00000 ------------ T 0.71 0.88 0.55 0.68 0.87 0.73 A 0.29 0.12 0.45 0.32 0.13 0.27 0000 --- --- --- --- 489627 00000 ------------ A 0.75 0.88 0.55 0.68 0.91 0.74 T 0.25 0.12 0.45 0.32 0.09 0.26 0000 --- --- --- --- 489846 00000 ------------ A 0.96 1.00 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 489898 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 489989 00000 ------------ G 1.00 1.00 1.00 1.00 0.96 0.99 A 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 490007 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 490057 00000 ------------ - 0.12 0.08 0.00 0.00 0.00 0.03 + 0.88 0.92 1.00 1.00 1.00 0.97 0000 --- --- --- --- 490162 00000 ------------ - 0.68 0.95 0.55 0.68 0.87 0.73 + 0.32 0.05 0.45 0.32 0.13 0.27 0000 --- --- --- --- 490846 00000 ------------ T 1.00 1.00 0.95 1.00 1.00 0.99 A 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 490892 00000 ------------ G 1.00 1.00 0.97 1.00 1.00 0.99 T 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 490894 00000 ------------ A 0.96 0.96 1.00 1.00 1.00 0.99 G 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 490974 00000 ------------ G 0.97 0.92 1.00 1.00 1.00 0.98 T 0.03 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 491022 00000 ------------ C 0.67 0.88 0.55 0.68 0.88 0.72 T 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 491037 00000 ------------ C 0.67 0.88 0.55 0.68 0.88 0.72 T 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 491038 00000 ------------ A 0.67 0.88 0.55 0.68 0.88 0.72 C 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 491079 00000 ------------ C 1.00 1.00 1.00 0.91 0.81 0.93 G 0.00 0.00 0.00 0.09 0.19 0.07 0000 --- --- --- --- 491130 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 491350 00000 ------------ C 0.97 1.00 0.98 0.98 1.00 0.98 T 0.03 0.00 0.02 0.02 0.00 0.02 0000 --- --- --- --- 491506 00000 ------------ A 0.93 0.92 1.00 1.00 1.00 0.98 G 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 491528 00000 ------------ A 0.67 0.88 0.55 0.68 0.88 0.72 G 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 491687 00000 ------------ A 0.63 0.71 0.55 0.68 0.88 0.69 C 0.37 0.29 0.45 0.32 0.12 0.31 0000 --- --- --- --- 491735 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 491781 00000 ------------ G 0.67 0.88 0.55 0.68 0.88 0.72 A 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 491789 00000 ------------ G 0.93 0.92 1.00 1.00 1.00 0.98 A 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 491795 00000 ------------ C 0.70 0.88 0.55 0.68 0.92 0.74 A 0.30 0.12 0.45 0.32 0.08 0.26 0000 --- --- --- --- 491807 00000 ------------ A 1.00 1.00 1.00 0.91 0.81 0.93 C 0.00 0.00 0.00 0.09 0.19 0.07 0000 --- --- --- --- 491876 00000 ------------ A 0.70 0.88 0.55 0.68 0.92 0.74 G 0.30 0.12 0.45 0.32 0.08 0.26 0000 --- --- --- --- 492078 00000 ------------ G 0.80 1.00 0.59 0.52 0.50 0.64 A 0.20 0.00 0.41 0.48 0.50 0.36 0000 --- --- --- --- 492119 00000 ------------ A 0.70 0.58 0.82 0.75 0.62 0.71 C 0.30 0.42 0.18 0.25 0.38 0.29 0000 --- --- --- --- 492239 00000 ------------ C 0.77 0.88 0.55 0.68 0.88 0.74 T 0.23 0.12 0.45 0.32 0.12 0.26 0000 --- --- --- --- 492372 00000 ------------ A 0.94 0.88 1.00 1.00 1.00 0.98 G 0.06 0.12 0.00 0.00 0.00 0.02 0000 --- --- --- --- 492476 00000 ------------ G 0.94 1.00 1.00 1.00 0.96 0.98 A 0.06 0.00 0.00 0.00 0.04 0.02 0000 --- --- --- --- 492888 00000 ------------ A 0.96 1.00 0.86 0.82 1.00 0.92 G 0.04 0.00 0.14 0.18 0.00 0.08 0000 --- --- --- --- 492971 00000 ------------ G 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 499018 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 499144 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 499190 00000 ------------ G 0.90 1.00 0.59 0.57 0.60 0.69 C 0.10 0.00 0.41 0.43 0.40 0.31 0000 --- --- --- --- 499313 00000 ------------ A 0.67 0.88 0.55 0.68 0.88 0.72 G 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 499435 00000 ------------ G 0.73 0.88 0.57 0.68 0.90 0.74 A 0.27 0.12 0.43 0.32 0.10 0.26 0000 --- --- --- --- 499508 00000 ------------ A 0.70 0.79 0.59 0.52 0.50 0.59 G 0.30 0.21 0.41 0.48 0.50 0.41 0000 --- --- --- --- 499527 00000 ------------ C 0.77 0.92 0.73 0.80 0.92 0.82 T 0.23 0.08 0.27 0.20 0.08 0.18 0000 --- --- --- --- 499605 00000 ------------ A 1.00 0.86 1.00 1.00 1.00 0.98 C 0.00 0.14 0.00 0.00 0.00 0.02 0000 --- --- --- --- 499654 00000 ------------ G 1.00 1.00 0.86 0.91 0.96 0.94 A 0.00 0.00 0.14 0.09 0.04 0.06 0000 --- --- --- --- 499669 00000 ------------ T 1.00 0.86 0.86 0.91 0.96 0.92 C 0.00 0.14 0.14 0.09 0.04 0.08 0000 --- --- --- --- 499686 00000 ------------ G 1.00 1.00 1.00 0.95 1.00 0.99 C 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 500018 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 500231 00000 ------------ - 0.61 0.67 0.55 0.69 0.89 0.69 + 0.39 0.33 0.45 0.31 0.11 0.31 0000 --- --- --- --- 500262 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 500267 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 500533 00000 ------------ A 0.89 0.92 1.00 1.00 1.00 0.98 C 0.11 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 500628 00000 ------------ T 1.00 1.00 0.95 0.97 1.00 0.98 G 0.00 0.00 0.05 0.03 0.00 0.02 0000 --- --- --- --- 500797 00000 ------------ G 0.93 0.91 1.00 1.00 1.00 0.98 A 0.07 0.09 0.00 0.00 0.00 0.02 0000 --- --- --- --- 500822 00000 ------------ C 0.67 0.86 0.55 0.67 0.88 0.72 T 0.33 0.14 0.45 0.33 0.12 0.28 0000 --- --- --- --- 500829 00000 ------------ C 0.97 0.91 1.00 1.00 1.00 0.98 T 0.03 0.09 0.00 0.00 0.00 0.02 0000 --- --- --- --- 501031 00000 ------------ C 0.67 0.86 0.55 0.67 0.88 0.72 T 0.33 0.14 0.45 0.33 0.12 0.28 0000 --- --- --- --- 501160 00000 ------------ T 0.67 0.88 0.55 0.67 0.88 0.72 G 0.33 0.12 0.45 0.33 0.12 0.28 0000 --- --- --- --- 501407 00000 ------------ G 0.57 0.71 0.58 0.67 0.88 0.69 T 0.43 0.29 0.42 0.33 0.12 0.31 0000 --- --- --- --- 501475 00000 ------------ C 0.97 1.00 1.00 1.00 0.96 0.98 T 0.03 0.00 0.00 0.00 0.04 0.02 0000 --- --- --- --- 501958 00000 ------------ C 0.67 0.90 0.56 0.65 0.87 0.72 G 0.33 0.10 0.44 0.35 0.13 0.28 0000 --- --- --- --- 502191 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 502241 00000 ------------ G 0.92 0.92 1.00 1.00 1.00 0.98 C 0.08 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 502248 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 502295 00000 ------------ G 0.58 0.62 0.55 0.69 0.88 0.68 C 0.42 0.38 0.45 0.31 0.12 0.32 0000 --- --- --- --- 502302 00000 ------------ A 0.81 0.92 0.55 0.68 0.92 0.76 G 0.19 0.08 0.45 0.32 0.08 0.24 0000 --- --- --- --- 502344 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 502700 00000 ------------ A 1.00 0.92 1.00 1.00 1.00 0.99 G 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 502725 00000 ------------ C 0.67 0.88 0.55 0.68 0.88 0.72 A 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 502786 00000 ------------ A 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 502875 00000 ------------ A 0.96 0.96 1.00 1.00 1.00 0.99 G 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 502998 00000 ------------ A 0.93 0.79 1.00 1.00 1.00 0.96 G 0.07 0.21 0.00 0.00 0.00 0.04 0000 --- --- --- --- 503073 00000 ------------ - 0.93 0.79 1.00 1.00 1.00 0.96 + 0.07 0.21 0.00 0.00 0.00 0.04 0000 --- --- --- --- 503276 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 503406 00000 ------------ A 0.93 0.96 1.00 1.00 1.00 0.98 T 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 503518 00000 ------------ T 1.00 1.00 0.93 1.00 1.00 0.98 G 0.00 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 503607 00000 ------------ T 0.67 0.88 0.55 0.68 0.88 0.72 C 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 503608 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 503616 00000 ------------ G 0.93 0.96 1.00 1.00 1.00 0.98 A 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 503626 00000 ------------ G 0.67 0.88 0.55 0.68 0.88 0.72 A 0.33 0.12 0.45 0.32 0.12 0.28 0000 --- --- --- --- 504017 00000 ------------ C 0.96 1.00 0.68 0.55 0.60 0.70 T 0.04 0.00 0.33 0.45 0.40 0.30 0000 --- --- --- --- 504107 00000 ------------ G 0.58 0.64 0.53 0.68 0.88 0.68 A 0.42 0.36 0.47 0.32 0.12 0.32 0000 --- --- --- --- 504419 00000 ------------ A 0.69 0.88 0.55 0.68 0.88 0.73 C 0.31 0.12 0.45 0.32 0.12 0.27 0000 --- --- --- --- 504472 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 504581 00000 ------------ A 0.88 0.88 1.00 1.00 1.00 0.97 T 0.12 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 504603 00000 ------------ A 0.92 0.92 1.00 1.00 1.00 0.98 G 0.08 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 504892 00000 ------------ A 0.67 0.88 0.55 0.65 0.87 0.71 G 0.33 0.12 0.45 0.35 0.13 0.29 0000 --- --- --- --- 505072 00000 ------------ A 1.00 0.75 1.00 1.00 1.00 0.97 C 0.00 0.25 0.00 0.00 0.00 0.03 0000 --- --- --- --- 505129 00000 ------------ G 0.95 0.95 1.00 1.00 1.00 0.99 A 0.05 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 505268 00000 ------------ A 0.85 0.82 1.00 1.00 1.00 0.95 G 0.15 0.18 0.00 0.00 0.00 0.05 0000 --- --- --- --- 541845 00000 ------------ C 1.00 1.00 0.91 0.91 0.75 0.89 A 0.00 0.00 0.09 0.09 0.25 0.11 0000 --- --- --- --- 541905 00000 ------------ C 1.00 1.00 0.91 0.91 0.75 0.89 T 0.00 0.00 0.09 0.09 0.25 0.11 0000 --- --- --- --- 542085 00000 ------------ T 1.00 1.00 1.00 1.00 0.96 0.99 G 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 542275 00000 ------------ G 1.00 1.00 1.00 1.00 0.96 0.99 A 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 542751 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 542868 00000 ------------ - 0.08 0.00 0.07 0.09 0.00 0.05 + 0.92 1.00 0.93 0.91 1.00 0.95 0000 --- --- --- --- 542910 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 543001 00000 ------------ C 0.96 0.92 1.00 1.00 1.00 0.98 T 0.04 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 543226 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 543524 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 543539 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 543590 00000 ------------ C 0.90 1.00 1.00 0.98 0.90 0.95 T 0.10 0.00 0.00 0.02 0.10 0.05 0000 --- --- --- --- 543782 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 543871 00000 ------------ C 0.93 0.92 1.00 1.00 1.00 0.98 T 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 549771 00000 ------------ C 0.90 0.88 1.00 1.00 1.00 0.97 T 0.10 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 550142 00000 ------------ A 1.00 1.00 1.00 0.98 0.90 0.97 G 0.00 0.00 0.00 0.02 0.10 0.03 0000 --- --- --- --- 550541 00000 ------------ C 0.87 0.75 0.91 0.80 0.71 0.81 T 0.13 0.25 0.09 0.20 0.29 0.19 0000 --- --- --- --- 550603 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 G 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 551034 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 551050 00000 ------------ - 0.87 0.96 0.75 0.83 0.94 0.86 + 0.13 0.04 0.25 0.17 0.06 0.14 0000 --- --- --- --- 551104 00000 ------------ - 0.90 0.83 1.00 0.97 1.00 0.96 + 0.10 0.17 0.00 0.03 0.00 0.04 0000 --- --- --- --- 551201 00000 ------------ T 0.90 0.88 1.00 1.00 1.00 0.97 C 0.10 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 551240 00000 ------------ - 1.00 1.00 0.98 0.83 0.83 0.91 + 0.00 0.00 0.02 0.17 0.17 0.09 0000 --- --- --- --- 551266 00000 ------------ C 0.93 0.92 1.00 1.00 1.00 0.98 A 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 551294 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 551395 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 551456 00000 ------------ A 0.96 0.95 1.00 1.00 1.00 0.99 G 0.04 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 551689 00000 ------------ A 0.73 0.83 0.64 0.55 0.46 0.61 T 0.27 0.17 0.36 0.45 0.54 0.39 0000 --- --- --- --- 551729 00000 ------------ A 0.93 0.88 1.00 1.00 1.00 0.97 G 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 551931 00000 ------------ T 0.88 1.00 0.88 0.91 1.00 0.93 G 0.12 0.00 0.12 0.09 0.00 0.07 0000 --- --- --- --- 552100 00000 ------------ A 0.90 0.88 1.00 1.00 1.00 0.97 T 0.10 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 552264 00000 ------------ T 1.00 1.00 0.98 0.98 1.00 0.99 C 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 552384 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 552506 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 552747 00000 ------------ A 0.90 0.86 1.00 1.00 1.00 0.97 T 0.10 0.14 0.00 0.00 0.00 0.03 0000 --- --- --- --- 552971 00000 ------------ A 1.00 1.00 0.90 0.82 0.73 0.87 T 0.00 0.00 0.10 0.18 0.27 0.13 0000 --- --- --- --- 553249 00000 ------------ C 0.93 0.92 1.00 1.00 1.00 0.98 A 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 553281 00000 ------------ A 0.93 0.92 1.00 1.00 1.00 0.98 G 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 553285 00000 ------------ T 0.83 0.83 0.75 0.84 0.94 0.84 C 0.17 0.17 0.25 0.16 0.06 0.16 0000 --- --- --- --- 553531 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 634645 00000 ------------ C 0.96 0.96 1.00 1.00 1.00 0.99 T 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 634727 00000 ------------ G 1.00 1.00 0.95 1.00 1.00 0.99 A 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 634786 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 634857 00000 ------------ A 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 634999 00000 ------------ A 0.79 0.95 0.62 0.64 0.50 0.66 G 0.21 0.05 0.38 0.36 0.50 0.34 0000 --- --- --- --- 635107 00000 ------------ T 0.96 1.00 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 635168 00000 ------------ A 0.79 0.96 0.59 0.64 0.50 0.65 C 0.21 0.04 0.41 0.36 0.50 0.35 0000 --- --- --- --- 635474 00000 ------------ C 1.00 1.00 0.98 0.86 0.75 0.90 T 0.00 0.00 0.02 0.14 0.25 0.10 0000 --- --- --- --- 635489 00000 ------------ T 0.80 0.96 0.59 0.64 0.50 0.66 C 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 635518 00000 ------------ G 1.00 1.00 1.00 1.00 0.96 0.99 A 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 635526 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 635527 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 635826 01550 3' UTR C 1.00 1.00 0.98 0.98 0.98 0.98 T 0.00 0.00 0.02 0.02 0.02 0.02 0000 --- --- --- --- 636031 00000 ------------ - 0.81 0.68 0.87 0.94 0.90 0.86 + 0.19 0.32 0.13 0.06 0.10 0.14 0000 --- --- --- --- 636082 00000 ------------ T 1.00 1.00 1.00 0.97 1.00 0.99 C 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 636083 00000 ------------ C 0.80 1.00 0.54 0.59 0.42 0.60 T 0.20 0.00 0.46 0.41 0.58 0.40 0000 --- --- --- --- 636099 00000 ------------ C 1.00 1.00 0.93 0.94 0.97 0.96 A 0.00 0.00 0.07 0.06 0.03 0.04 0000 --- --- --- --- 636233 00000 ------------ A 1.00 1.00 0.84 0.93 0.93 0.93 T 0.00 0.00 0.16 0.07 0.07 0.07 0000 --- --- --- --- 636699 00000 ------------ T 0.93 0.86 1.00 1.00 1.00 0.97 C 0.07 0.14 0.00 0.00 0.00 0.03 0000 --- --- --- --- 636754 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 636831 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 636889 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 637045 00000 ------------ C 0.93 1.00 0.84 0.93 1.00 0.94 T 0.07 0.00 0.16 0.07 0.00 0.06 0000 --- --- --- --- 637091 00000 ------------ G 0.53 0.50 0.75 0.70 0.88 0.71 A 0.47 0.50 0.25 0.30 0.12 0.29 0000 --- --- --- --- 637146 00000 ------------ C 0.82 0.96 0.59 0.64 0.45 0.65 A 0.18 0.04 0.41 0.36 0.55 0.35 0000 --- --- --- --- 637208 00000 ------------ G 0.96 0.96 1.00 1.00 0.98 0.98 A 0.04 0.04 0.00 0.00 0.02 0.02 0000 --- --- --- --- 637369 00000 ------------ G 0.82 0.96 0.59 0.64 0.50 0.66 C 0.18 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 637402 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 637424 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 638109 00000 ------------ G 0.83 0.96 0.62 0.64 0.50 0.67 A 0.17 0.04 0.38 0.36 0.50 0.33 0000 --- --- --- --- 638297 00000 ------------ T 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 638497 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 638773 00000 ------------ A 1.00 1.00 1.00 1.00 0.96 0.99 C 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 639306 00000 ------------ G 1.00 1.00 1.00 0.95 1.00 0.99 A 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 639332 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 639357 00000 ------------ A 0.93 0.88 1.00 1.00 1.00 0.97 G 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 639361 00000 ------------ - 1.00 0.96 1.00 1.00 0.98 0.99 + 0.00 0.04 0.00 0.00 0.02 0.01 0000 --- --- --- --- 639490 00000 ------------ G 1.00 1.00 1.00 0.97 1.00 0.99 T 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 639633 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 639890 00000 ------------ C 0.80 0.95 0.59 0.62 0.50 0.65 T 0.20 0.05 0.41 0.38 0.50 0.35 0000 --- --- --- --- 639891 00000 ------------ G 1.00 1.00 0.95 1.00 1.00 0.99 A 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 639907 00000 ------------ A 0.80 0.95 0.59 0.62 0.50 0.65 G 0.20 0.05 0.41 0.38 0.50 0.35 0000 --- --- --- --- 639949 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 640008 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 640112 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 640114 00000 ------------ A 0.80 0.96 0.59 0.64 0.50 0.66 T 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 640266 00000 ------------ A 1.00 1.00 1.00 0.98 0.90 0.97 G 0.00 0.00 0.00 0.02 0.10 0.03 0000 --- --- --- --- 640582 00000 ------------ - 0.20 0.04 0.41 0.36 0.50 0.34 + 0.80 0.96 0.59 0.64 0.50 0.66 0000 --- --- --- --- 640657 00000 ------------ G 0.80 0.96 0.59 0.64 0.50 0.66 A 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 640945 00000 ------------ T 0.80 0.96 0.59 0.64 0.50 0.66 C 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 640995 00000 ------------ A 0.93 0.88 1.00 1.00 1.00 0.97 T 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 641077 00000 ------------ A 0.80 0.96 0.59 0.64 0.50 0.66 G 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 674682 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 674683 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 674736 00000 ------------ T 0.90 0.75 1.00 0.98 1.00 0.95 C 0.10 0.25 0.00 0.02 0.00 0.05 0000 --- --- --- --- 674768 00000 ------------ T 0.80 0.96 0.59 0.64 0.50 0.66 C 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 674801 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 674892 00000 ------------ C 0.57 0.50 0.75 0.70 0.88 0.71 T 0.43 0.50 0.25 0.30 0.12 0.29 0000 --- --- --- --- 674924 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 675116 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 675629 00000 ------------ T 0.80 0.96 0.59 0.64 0.50 0.66 A 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 675667 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 675783 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 675789 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 675798 00000 ------------ T 0.80 0.96 0.59 0.64 0.50 0.66 G 0.20 0.04 0.41 0.36 0.50 0.34 0000 --- --- --- --- 676071 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 676399 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 676758 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 676819 00000 ------------ C 0.88 0.73 0.70 0.64 0.50 0.66 G 0.12 0.27 0.30 0.36 0.50 0.34 0000 --- --- --- --- 676828 00000 ------------ C 0.96 1.00 0.98 1.00 0.98 0.98 T 0.04 0.00 0.02 0.00 0.02 0.02 0000 --- --- --- --- 676969 00000 ------------ G 0.88 0.73 0.84 0.76 0.87 0.82 A 0.12 0.27 0.16 0.24 0.13 0.18 0000 --- --- --- --- 708997 00000 ------------ T 1.00 1.00 1.00 1.00 0.97 0.99 A 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 709296 00000 ------------ C 1.00 1.00 0.97 1.00 1.00 0.99 T 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 709685 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 709840 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 709874 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 710072 00000 ------------ G 1.00 1.00 1.00 1.00 0.96 0.99 A 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 710216 00000 ------------ C 0.90 1.00 1.00 1.00 1.00 0.98 G 0.10 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 710428 00000 ------------ T 0.63 0.50 0.76 0.64 0.76 0.68 A 0.37 0.50 0.24 0.36 0.24 0.32 0000 --- --- --- --- 710456 00000 ------------ T 0.63 0.67 0.60 0.64 0.54 0.61 C 0.37 0.33 0.40 0.36 0.46 0.39 0000 --- --- --- --- 710482 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 710736 00000 ------------ G 0.92 0.96 0.81 0.84 0.91 0.88 A 0.08 0.04 0.19 0.16 0.09 0.12 0000 --- --- --- --- 710848* 710941 00000 ------------ A 0.97 1.00 0.86 0.86 0.85 0.89 G 0.03 0.00 0.14 0.14 0.15 0.11 0000 --- --- --- --- 711012 00000 ------------ A 0.97 0.96 0.86 0.86 0.85 0.89 C 0.03 0.04 0.14 0.14 0.15 0.11 0000 --- --- --- --- 711325 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 711373 01620 3' UTR C 0.93 0.83 1.00 0.98 1.00 0.96 G 0.07 0.17 0.00 0.02 0.00 0.04 0000 --- --- --- --- 711861 02108 3' UTR C 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 712464 00000 ------------ C 1.00 1.00 1.00 1.00 0.97 0.99 T 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 712690 00000 ------------ C 0.93 0.96 0.98 1.00 1.00 0.98 T 0.07 0.04 0.02 0.00 0.00 0.02 0000 --- --- --- --- 712754 00000 ------------ A 0.68 0.54 0.60 0.69 0.54 0.61 G 0.32 0.46 0.40 0.31 0.46 0.39 0000 --- --- --- --- 712896 00000 ------------ - 0.04 0.00 0.00 0.00 0.00 0.01 + 0.96 1.00 1.00 1.00 1.00 0.99 0000 --- --- --- --- 713845 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 714211 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004894: T 004936: G 145494: G 341218: C 341806: AT 343186: T 473907: A 474617: AT 475548: AATAA 489446: AGAA 490057: AAT 490162: GATACA 500231: CAA 503073: AT 542868: GT 551050: T 551104: AGTT 551240: A 636031: T 639361: AT 640582: AGCC 712896: C The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele3 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq 710848 A 0.00 0.00 0.00 0.00 0.06 0.02 G 0.73 0.75 0.57 0.64 0.50 0.62 T 0.27 0.25 0.43 0.36 0.44 0.37