LOCUS GADD45B 4536 bp DNA PRI 26-JUL-2002 DEFINITION Homo sapiens GADD45B: growth arrest and DNA-damage-inducible, beta (GADD45B) gene, complete cds. ACCESSION GADD45B VERSION KEYWORDS . SOURCE Homo sapiens. ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4536) AUTHORS Rieder,M.J., Livingston,R.J., Braun,A.C., Montoya,M.A., Chung,M.-W., Miyamoto,K.E., Nguyen,C.P., Nguyen,D.A., Poel,C.L., Robertson,P.D., Schackwitz,W.S., Sherwood,J.K., Witrak,L.A. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (26-JUL-2002) Genome Sciences, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478, Department of Genome Sciences, Seattle, WA (URL: http://egp.gs.washington.edu). FEATURES Location/Qualifiers source 1..4536 /organism="Homo sapiens" /db_xref="taxon:9606" repeat_region 1..61 /rpt_family="MER1_type?" /rpt_type=dispersed variation 75 /replace="G" /frequency="0.01" repeat_region 120..221 /rpt_family="Alu" /rpt_type=dispersed variation 142 /replace="C" /frequency="0.01" variation 278 /replace="C" /frequency="0.01" misc_feature 444..637 /note="Region not scanned for variation" variation 725 /replace="G" /frequency="0.01" repeat_region 729..869 /rpt_family="MIR" /rpt_type=dispersed variation 811 /replace="G" /frequency="0.01" variation 979 /replace="A" /frequency="0.07" misc_feature 1095..1278 /note="Region not scanned for variation" variation 1364 /replace="G" /frequency="0.02" variation 1375 /replace="A" /frequency="0.09" variation 1484 /replace="G" /frequency="0.01" mRNA join(1827..2090,2222..2323,2722..2944,3181..3951) /gene="GADD45B" /product="GADD45B" gene 1827..3951 /gene="GADD45B" variation 1837 /gene="GADD45B" /replace="T" /frequency="0.01" CDS join(2047..2090,2222..2323,2722..2944,3181..3294) /gene="GADD45B" /codon_start=1 /product="GADD45B: growth arrest and DNA-damage-inducible, beta" /translation="MTLEELVACDNAAQKMQTVTAAVEELLVAAQRQDRLTVGVYESA KLMNVDPDSVVLCLLAIDEEEEDDIALQIHFTLIQSFCCDNDINIVRVSGMQRLAQLL GEPAETQGTTEARDLHCLLVTNPHTDAWKSHGLVEVASYCEESRGNNQWVPYISLQER " variation 2136..2140 /gene="GADD45B" /replace="-" /frequency="0.98" variation 2411 /gene="GADD45B" /replace="A" /frequency="0.03" variation 2480 /gene="GADD45B" /replace="A" /frequency="0.01" variation 2485 /gene="GADD45B" /replace="T" /frequency="0.13" variation 2687 /gene="GADD45B" /replace="T" /frequency="0.01" variation 2972 /gene="GADD45B" /replace="T" /frequency="0.21" variation 3011 /gene="GADD45B" /replace="A" /frequency="0.40" variation 3366 /gene="GADD45B" /replace="-" /frequency="0.74" variation 3449 /gene="GADD45B" /replace="A" /frequency="0.01" variation 3516 /gene="GADD45B" /replace="A" /frequency="0.21" variation 3519 /gene="GADD45B" /replace="C" /frequency="0.13" variation 3527 /gene="GADD45B" /replace="C" /frequency="0.01" variation 3891 /gene="GADD45B" /replace="A" /frequency="0.01" variation 4027 /replace="-" /frequency="0.96" variation 4041 /replace="C" /frequency="0.29" variation 4449 /replace="-" /frequency="0.02" variation 4450 /replace="C" /frequency="0.37" variation 4451 /replace="A" /frequency="0.37" BASE COUNT 875 a 1493 c 1278 g 890 t ORIGIN 1 aaatcaatgc ccaagtatcc atgaggaaca aaatatcaaa attgtaaata aagacagaat 61 ctgactttgc acttatccca cccacctccc tgatcttcct tatcttcagc tcatgttggc 121 catgttggtc aggttggtct cgaactcctg acctcagttg atccgcccgc ctcggactcc 181 caaagtgctg ggattacagg cgtaagccac cgcgcccggc cgatttaact tttaaattga 241 aattataaaa tataaatatg tatgttgcat gcgtaaaaca ttgcataaag ttacataaaa 301 cgttgcaacc gccacggtcc ccttatcccc cgcctccagc ccagtgcccc gcccgtccgt 361 ccctctcttc cggcgctgag ggcgcagaaa ctcggcgcgg ccaccagatg gcgccaccgc 421 gcctcgcagc cccgggacat ttcgtgcccc agcggtgggc ggcgcggagg aggtgggatg 481 cgtcagccgg acccgcgggc cggggagccg ggcaactggg gaaagtgagc cgccgggcgg 541 aggccagacc ccaggctggc gggggagggg actcagatgt gagtcacccg ggagccccca 601 gtcgaccgtg ggagacgttg tcatgcgggg cctgccagcc tcgctcctga acagccttcc 661 cggggcggcg gagtcctgca ggcggccgtg cctggcgcac acgcgtggct ccaacacgaa 721 ctagcctatg gcctcaccaa gcctcagttt ccccttttgc ataatgcaca taagcatccc 781 ccctgcttcc caggtcttgg attaaatcat ccatgaatcc ggaggggtgg ggggtaccag 841 gtccgcacca cgcactcaat gcaggtcagc gcccaccccg gagtgagaaa taaaagtagc 901 cgtcatcctt gcacgtgggc cctgggtggc ggcgtgcagc cggagcctgc accattcccc 961 tcaacaatgg ctttctcccg ggcctggagg cctccgcacg ggcaaaggct ggaacgccag 1021 gcagccggcg ggggcggggc cgcgccacct gcacctccca cgcgcacccc accctgatac 1081 tcgcggggtc ggcgaggagg cgcccacttt cttctccaga gcgccccggg ctttgcaacc 1141 tcccactttc ggggccctcg aggaggcctc ccgcgaccac caggtgacag ctgatgtgta 1201 ttgggctctt actgtcagcc gtattttatg ccatgctctg caaaccagcg aggccggcgc 1261 tgcagaccca ttactcagac gggaacagag aggccgggag aagcgaaatc acccaggggc 1321 tggggtcgtc gcagccagga gagactccgg ccctcaccac cacctgggcg agatcacgct 1381 gcaaacgggg ccccttcccg gtgcagcccc tccaccccca gcagaacttg ggaaaggcgc 1441 ggtccgggac tctccgcgga tcgggagggg attccaggcc cccccgaaag tccgggccgc 1501 ctcgcgcgct ggaaatcccg cgcgcgcccc gaaccgcggc tcggctgccg ggaaatcagg 1561 agaaaaaaac ttctgctttt ttttcttttc tggcattcgc ggtcacctac ccggcccccg 1621 cgcgccctcc tcccggttct cgcccccacg tggggcgccc ccgcacgccg ctcctccccc 1681 tcccctccgt cggccaaccg cagagctagc tgcactcgcc cttgtctttc caccaatagg 1741 aggggcgaat gactccactg aggccacgcc caatgttcaa gtctataaaa gtcggtgccg 1801 gaggctccca gctcagatcg ccgaagcgtc ggactaccgt tggtttccgc aacttcctgg 1861 attatcctcg ccaaggactt tgcaatatat ttttccgcct tttctggaag gatttcgctg 1921 cttcccgaag gtcttggacg agcgctctag ctctgtggga aggttttggg ctctctggct 1981 cggattttgc aatttctccc tggggactgc cgtggagccg catccactgt ggattataat 2041 tgcaacatga cgctggaaga gctcgtggcg tgcgacaacg cggcgcagaa gtaagtagcc 2101 ggggctgccg ccgcctgagg tcagccggga cgggacggga tgggtcgggt tgggccgggc 2161 cgggagcgga acgtagcacc cggtggtccg cccgtcactg atccctcttt cctggtctca 2221 ggatgcagac ggtgaccgcc gcggtggagg agcttttggt ggccgctcag cgccaggatc 2281 gcctcacagt gggggtgtac gagtcggcca agttgatgaa tgtgtgagtc agaccccctt 2341 cccgggctgg gcgcgggtgg gacgggacct cccctccgct ctggacgctt tccgcacgct 2401 tgtcttgcat ggagctggga cttccccaag tgccccccgc tgtggatgca gagcttctct 2461 gccgttttgt ggatcggggg ctgccgtatc ctgatgtatc gtctgcaaac acccctcccg 2521 ccgtgggcct gtctccccct accccatact ttgaaccgtg tgccctcccc tccccccacc 2581 gtcaccagct tgcagaggca atcccctgca cccttgcagt ttctcttttg ctcttgcacg 2641 ctcctttttt gcaaactccc cctgcacggt ggcccctccc ctgtccccgg ctgacccatc 2701 cctacccttt ggccccctca gggacccaga cagcgtggtc ctctgcctct tggccattga 2761 cgaggaggag gaggatgaca tcgccctgca aatccacttc acgctcatcc agtccttctg 2821 ctgtgacaac gacatcaaca tcgtgcgggt gtcgggcatg cagcgcctgg cgcagctcct 2881 gggagagccg gccgagaccc agggcaccac cgaggcccga gacctgcatt gtctcctggt 2941 cacggtgagt cgggcctctg ccctgccccg ccacgcccgg gcacctgggc cggtgtttgt 3001 caacaaagtc gggctgactg gtcctgcaca gctcagcgct cagccacgtt tggcatgtcc 3061 cgtgggcagc cgggctgggg cctcctcacc caggaagcta ttttgagcct gactgttttc 3121 cccacacagg ggccccggga gagggaggct ccactaaacc ccttcttttc cctcctacag 3181 aaccctcaca cggacgcctg gaagagccac ggcttggtgg aggtggccag ctactgcgaa 3241 gaaagccggg gcaacaacca gtgggtcccc tacatctctc ttcaggaacg ctgaggccct 3301 tcccagcagc agaatctgtt gagttgctgc cacaaacaaa aaatacaata aatatttgaa 3361 cccccctccc ccccagcaca acccccccaa aacaacccaa cccacgagga ccatcggggg 3421 cagagtcgtt ggagactgaa gaggaagagg aggaggagaa ggggagtgag cggccgcccc 3481 cagggcggag atccaggagc tggcggccgc cgatccgatg gagaaggggg gacccaggcc 3541 agcaggagac aggacccccg aagctgaggc cttgggatgg agcagaagcc ggagtggcgg 3601 ggcacgctgc cgccttcccc atcacggagg gtccagactg tccactcggg ggtggagtga 3661 gactgactgc aagccccacc ctccttgaga ctggagctgg cgtctgcata cgagagactt 3721 ggttgaactt ggttggtcct tgtctgcacc ctcgacaaga ccacactttg ggacttggga 3781 gctggggctg aagttgctct gtacccatga actcccagtt tgcgaattat agagacaatc 3841 tattttgtta cttgcacttg ttattcgaac cactgagagc gagatgggaa gcatagatat 3901 ctatattttt atttctacta tgagggcctt gtaataaatt tctaaagcct ctggttgctt 3961 gtatgttttc ggcttctaga acaactagga cccctgcccc ctccccgggg acacgcttca 4021 cccccccaca acccccgcca gctcaccagg aagtgttact taagcccctg ttagcagctc 4081 caggctcccg tgcagaaaca gtaccccttc tctccgcagc aggcgccgcc accgactcca 4141 acaaatctat gcctcttttt ttttttcctt ctcctcctac cctgcagcaa ttaagagacc 4201 ggtttattac gaaacctggc cgccgtgcca ccactgttac tggctgtgca ggagccaacc 4261 ccaagctctg ggcacatatg gaggcatttc agcgggaggg ggtgctggct gcagcccctg 4321 accgcctagg cggccaccgc agcccaaggt ccggatcggt caagggggca cctggtacca 4381 cacagcgagg tgagctcagg gcttgcaagg aagagcgctt ttggaggctt ccccagggag 4441 tgccccccca gcccaccaca gccttctcca tcccaggata ggcctctctt ttgcactaaa 4501 gaaaaaaact ttttttattt ccgcaaacta aaatca //