Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000288 00000 ------------ C 0.95 1.00 0.97 1.00 1.00 0.99 T 0.05 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 000307 00000 ------------ - 0.80 0.95 0.95 0.97 1.00 0.95 + 0.20 0.05 0.05 0.03 0.00 0.05 0000 --- --- --- --- 000534 00000 ------------ T 0.38 0.67 0.84 0.61 0.50 0.61 A 0.62 0.33 0.16 0.39 0.50 0.39 0000 --- --- --- --- 000728 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000814 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000835 00000 ------------ A 0.73 0.88 0.98 1.00 0.94 0.92 T 0.27 0.12 0.02 0.00 0.06 0.08 0000 --- --- --- --- 000918 00000 ------------ C 0.96 0.96 0.98 1.00 0.94 0.97 T 0.04 0.04 0.02 0.00 0.06 0.03 0000 --- --- --- --- 000955 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 001058 00000 ------------ A 0.88 1.00 0.98 0.79 0.61 0.84 G 0.12 0.00 0.02 0.21 0.39 0.16 0000 --- --- --- --- 001161 00000 ------------ T 0.75 0.94 0.98 1.00 0.92 0.93 G 0.25 0.06 0.02 0.00 0.08 0.07 0000 --- --- --- --- 001228 00000 ------------ G 1.00 0.96 0.83 0.89 0.77 0.87 A 0.00 0.04 0.17 0.11 0.23 0.13 0000 --- --- --- --- 001429 00000 ------------ G 0.75 0.88 0.98 1.00 0.93 0.92 C 0.25 0.12 0.02 0.00 0.07 0.08 0000 --- --- --- --- 001436 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 001458 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001604 00000 ------------ A 1.00 0.92 0.98 1.00 1.00 0.98 G 0.00 0.08 0.02 0.00 0.00 0.02 0000 --- --- --- --- 001653 00000 ------------ C 0.93 0.96 0.98 1.00 1.00 0.98 G 0.07 0.04 0.02 0.00 0.00 0.02 0000 --- --- --- --- 001913 00000 ------------ C 0.96 1.00 0.98 1.00 1.00 0.99 G 0.04 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001915 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001919 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001951 00000 ------------ T 0.95 1.00 1.00 1.00 1.00 0.99 A 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002182 00082 5' UTR G 0.86 1.00 1.00 1.00 1.00 0.99 A 0.14 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002198 00098 5' UTR A 1.00 1.00 1.00 1.00 0.96 0.99 C 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 002530 00000 ------------ G 1.00 0.94 1.00 1.00 1.00 0.99 T 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002591 00000 ------------ C 0.92 0.85 0.95 1.00 0.94 0.95 T 0.08 0.15 0.05 0.00 0.06 0.05 0000 --- --- --- --- 002780 00000 ------------ A 1.00 1.00 0.97 0.98 1.00 0.99 G 0.00 0.00 0.03 0.02 0.00 0.01 0000 --- --- --- --- 002796 00000 ------------ - 1.00 1.00 0.97 0.98 1.00 0.99 + 0.00 0.00 0.03 0.02 0.00 0.01 0000 --- --- --- --- 002878 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 002999 00000 ------------ T 0.75 0.88 0.95 1.00 0.96 0.92 C 0.25 0.12 0.05 0.00 0.04 0.08 0000 --- --- --- --- 003147 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 003151 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 003311 00000 ------------ - 0.00 0.05 0.02 0.00 0.00 0.01 + 1.00 0.95 0.98 1.00 1.00 0.99 0000 --- --- --- --- 003363 00000 ------------ A 0.96 0.96 0.98 1.00 1.00 0.98 G 0.04 0.04 0.02 0.00 0.00 0.02 0000 --- --- --- --- 003507 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 003544 00000 ------------ C 1.00 1.00 0.98 0.98 1.00 0.99 A 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 003602 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 003835 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 003889 00000 ------------ A 0.93 0.95 0.80 0.98 0.88 0.90 G 0.07 0.05 0.20 0.02 0.12 0.10 0000 --- --- --- --- 003918 00000 ------------ G 0.75 0.86 0.95 1.00 0.94 0.92 T 0.25 0.14 0.05 0.00 0.06 0.08 0000 --- --- --- --- 004516 00000 ------------ - 0.04 0.04 0.02 0.00 0.04 0.03 + 0.96 0.96 0.98 1.00 0.96 0.97 0000 --- --- --- --- 004517 00000 ------------ T 0.96 1.00 0.98 1.00 1.00 0.99 A 0.04 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 004828 00000 ------------ C 1.00 1.00 1.00 0.93 1.00 0.98 G 0.00 0.00 0.00 0.07 0.00 0.02 0000 --- --- --- --- 004996 00000 ------------ C 0.86 0.92 0.93 0.86 0.98 0.91 T 0.14 0.08 0.07 0.14 0.02 0.09 0000 --- --- --- --- 005014 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 G 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 005053 00000 ------------ G 0.96 0.92 0.95 0.83 0.98 0.93 T 0.04 0.08 0.05 0.17 0.02 0.07 0000 --- --- --- --- 005394 00000 ------------ C 0.86 0.95 0.95 1.00 0.94 0.95 A 0.14 0.05 0.05 0.00 0.06 0.05 0000 --- --- --- --- 005645 00000 ------------ - 0.68 0.86 0.93 1.00 0.93 0.91 + 0.32 0.14 0.07 0.00 0.07 0.09 0000 --- --- --- --- 006180 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 006317 00000 ------------ T 0.89 0.96 0.93 0.79 0.58 0.81 C 0.11 0.04 0.07 0.21 0.42 0.19 0000 --- --- --- --- 006671 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 006678 00000 ------------ T 0.86 0.91 0.91 0.78 0.60 0.79 C 0.14 0.09 0.09 0.23 0.40 0.21 0000 --- --- --- --- 007150 00000 ------------ T 0.93 1.00 1.00 1.00 1.00 0.99 C 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007239 00000 ------------ A 0.96 1.00 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007316 00000 ------------ A 0.96 1.00 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007502 00000 ------------ A 1.00 0.91 0.97 1.00 1.00 0.98 G 0.00 0.09 0.03 0.00 0.00 0.02 0000 --- --- --- --- 007557 00000 ------------ A 0.95 0.95 1.00 1.00 1.00 0.99 G 0.05 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007657 00000 ------------ T 0.91 1.00 1.00 1.00 1.00 0.99 C 0.09 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007783 00000 ------------ G 0.80 0.95 0.95 1.00 0.93 0.94 A 0.20 0.05 0.05 0.00 0.07 0.06 0000 --- --- --- --- 007795 00000 ------------ T 0.95 0.95 1.00 1.00 1.00 0.99 G 0.05 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007813 00000 ------------ T 0.36 0.68 0.79 0.62 0.52 0.61 A 0.64 0.32 0.21 0.38 0.48 0.39 0000 --- --- --- --- 009025 00000 ------------ A 0.96 0.96 1.00 0.98 1.00 0.98 G 0.04 0.04 0.00 0.02 0.00 0.02 0000 --- --- --- --- 009086 00000 ------------ C 0.43 0.67 0.83 0.60 0.52 0.62 G 0.57 0.33 0.17 0.40 0.48 0.38 0000 --- --- --- --- 009102 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 009270 00000 ------------ C 0.68 0.83 0.95 1.00 0.94 0.90 T 0.32 0.17 0.05 0.00 0.06 0.10 0000 --- --- --- --- 011506 00000 ------------ T 1.00 1.00 0.98 0.98 1.00 0.99 C 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 011583* 011787 00000 ------------ - 0.00 0.00 0.05 0.00 0.00 0.01 + 1.00 1.00 0.95 1.00 1.00 0.99 0000 --- --- --- --- 011946 00316 SYNON G 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0033 GCG GCA ALA(A) ALA(A) 012173 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 012283 00000 ------------ A 0.93 1.00 0.93 0.79 0.63 0.83 G 0.07 0.00 0.07 0.21 0.37 0.17 0000 --- --- --- --- 012461 00000 ------------ T 0.67 0.79 1.00 1.00 0.95 0.91 A 0.33 0.21 0.00 0.00 0.05 0.09 0000 --- --- --- --- 012544 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 012633 00000 ------------ T 1.00 1.00 1.00 1.00 0.96 0.99 G 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 012734 00000 ------------ - 0.62 0.42 0.16 0.29 0.48 0.37 + 0.38 0.58 0.84 0.71 0.52 0.63 0000 --- --- --- --- 012796 00000 ------------ G 1.00 0.92 1.00 1.00 1.00 0.99 T 0.00 0.08 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013250 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 C 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013570 00000 ------------ A 1.00 0.83 1.00 0.86 0.98 0.94 G 0.00 0.17 0.00 0.14 0.02 0.06 0000 --- --- --- --- 013809 00000 ------------ G 0.75 0.79 1.00 1.00 0.94 0.92 T 0.25 0.21 0.00 0.00 0.06 0.08 0000 --- --- --- --- 014049 00000 ------------ C 0.79 0.77 1.00 1.00 0.94 0.92 T 0.21 0.23 0.00 0.00 0.06 0.08 0000 --- --- --- --- 014165 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014351 00000 ------------ G 1.00 0.95 1.00 0.98 1.00 0.99 A 0.00 0.05 0.00 0.02 0.00 0.01 0000 --- --- --- --- 014393 00000 ------------ A 0.90 1.00 1.00 1.00 1.00 0.98 G 0.10 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 014454 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014525 00000 ------------ A 0.90 1.00 1.00 1.00 1.00 0.98 T 0.10 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 014622 00000 ------------ - 0.14 0.09 0.00 0.00 0.00 0.03 + 0.86 0.91 1.00 1.00 1.00 0.97 0000 --- --- --- --- 014703 00000 ------------ C 0.68 0.82 1.00 1.00 0.94 0.91 T 0.32 0.18 0.00 0.00 0.06 0.09 0000 --- --- --- --- 014783 00000 ------------ A 0.96 0.95 1.00 0.98 1.00 0.98 G 0.04 0.05 0.00 0.02 0.00 0.02 0000 --- --- --- --- 014798 00000 ------------ T 0.89 0.82 0.93 0.77 0.58 0.78 C 0.11 0.18 0.07 0.23 0.42 0.22 0000 --- --- --- --- 014990 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015018 00000 ------------ C 0.93 1.00 1.00 1.00 1.00 0.99 T 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015019 00000 ------------ G 1.00 0.88 1.00 0.86 0.98 0.95 C 0.00 0.12 0.00 0.14 0.02 0.05 0000 --- --- --- --- 015020 00000 ------------ A 1.00 0.88 1.00 0.86 0.98 0.95 T 0.00 0.12 0.00 0.14 0.02 0.05 0000 --- --- --- --- 015093 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015792 00481 SYNON A 1.00 1.00 0.97 1.00 1.00 0.99 G 0.00 0.00 0.03 0.00 0.00 0.01 0088 ACA ACG THR(T) THR(T) 015864 00000 ------------ A 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015891 00000 ------------ A 1.00 1.00 0.97 1.00 1.00 0.99 G 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 016166 00000 ------------ A 1.00 0.85 1.00 0.85 0.98 0.94 G 0.00 0.15 0.00 0.15 0.02 0.06 0000 --- --- --- --- 016196 00000 ------------ A 0.87 0.90 0.95 0.78 0.62 0.81 G 0.13 0.10 0.05 0.23 0.38 0.19 0000 --- --- --- --- 016287 00000 ------------ C 0.87 0.85 1.00 1.00 0.95 0.95 T 0.13 0.15 0.00 0.00 0.05 0.05 0000 --- --- --- --- 016725 00000 ------------ A 0.86 0.79 0.72 0.79 0.88 0.81 G 0.14 0.21 0.28 0.21 0.12 0.19 0000 --- --- --- --- 016855 00000 ------------ A 0.50 0.71 0.88 0.74 0.52 0.67 G 0.50 0.29 0.12 0.26 0.48 0.33 0000 --- --- --- --- 016990 00000 ------------ A 0.93 1.00 1.00 1.00 1.00 0.99 G 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 017209 00000 ------------ A 1.00 1.00 0.97 1.00 1.00 0.99 G 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 017496 00000 ------------ A 0.79 0.95 0.92 0.79 0.63 0.81 C 0.21 0.05 0.08 0.21 0.37 0.19 0000 --- --- --- --- 017633 00000 ------------ A 0.93 0.88 1.00 1.00 1.00 0.97 G 0.07 0.12 0.00 0.00 0.00 0.03 0000 --- --- --- --- 017740 00000 ------------ T 0.97 1.00 1.00 1.00 1.00 0.99 C 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 017753 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 018048 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 018356 00000 ------------ C 0.93 1.00 1.00 1.00 1.00 0.99 T 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 018466 00000 ------------ G 0.97 1.00 1.00 0.98 1.00 0.99 C 0.03 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 018536 00000 ------------ G 0.86 0.91 0.93 0.77 0.58 0.79 T 0.14 0.09 0.07 0.23 0.42 0.21 0000 --- --- --- --- 018577 00000 ------------ C 0.68 0.82 0.95 1.00 0.94 0.90 T 0.32 0.18 0.05 0.00 0.06 0.10 0000 --- --- --- --- 018632 00000 ------------ - 0.00 0.05 0.05 0.09 0.02 0.04 + 1.00 0.95 0.95 0.91 0.98 0.96 0000 --- --- --- --- 019222 00000 ------------ A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 019228 00000 ------------ C 0.54 0.75 0.86 0.77 0.52 0.69 T 0.46 0.25 0.14 0.23 0.48 0.31 0000 --- --- --- --- 019394 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 019451 00000 ------------ T 0.88 0.92 1.00 1.00 1.00 0.97 A 0.12 0.08 0.00 0.00 0.00 0.03 0000 --- --- --- --- 019468 00000 ------------ C 0.65 0.83 0.95 1.00 0.94 0.90 T 0.35 0.17 0.05 0.00 0.06 0.10 0000 --- --- --- --- 019653 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 019664 00000 ------------ G 0.90 1.00 1.00 1.00 1.00 0.98 T 0.10 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 019818 00000 ------------ C 0.97 0.95 1.00 0.97 1.00 0.98 T 0.03 0.05 0.00 0.03 0.00 0.02 0000 --- --- --- --- 020029 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 020315 00000 ------------ - 0.04 0.04 0.00 0.02 0.00 0.02 + 0.96 0.96 1.00 0.98 1.00 0.98 0000 --- --- --- --- 020337 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 020391 00000 ------------ C 1.00 1.00 1.00 0.98 0.98 0.99 T 0.00 0.00 0.00 0.02 0.02 0.01 0000 --- --- --- --- 020784 00000 ------------ C 0.50 0.58 0.93 0.73 0.54 0.67 G 0.50 0.42 0.07 0.27 0.46 0.33 0000 --- --- --- --- 020813 00000 ------------ A 0.87 0.83 0.93 0.77 0.59 0.79 G 0.13 0.17 0.07 0.23 0.41 0.21 0000 --- --- --- --- 020981 00000 ------------ - 0.67 0.79 1.00 1.00 0.95 0.91 + 0.33 0.21 0.00 0.00 0.05 0.09 0000 --- --- --- --- 021023 00000 ------------ C 1.00 1.00 1.00 1.00 0.95 0.99 G 0.00 0.00 0.00 0.00 0.05 0.01 0000 --- --- --- --- 021085 00000 ------------ C 1.00 1.00 1.00 1.00 0.95 0.99 A 0.00 0.00 0.00 0.00 0.05 0.01 0000 --- --- --- --- 021143 00000 ------------ T 0.96 0.94 1.00 0.89 0.97 0.95 A 0.04 0.06 0.00 0.11 0.03 0.05 0000 --- --- --- --- 022437 00000 ------------ C 0.94 1.00 1.00 1.00 1.00 0.99 T 0.06 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 022523 00000 ------------ T 0.39 0.73 0.85 0.71 0.50 0.65 A 0.61 0.27 0.15 0.29 0.50 0.35 0000 --- --- --- --- 022669 00000 ------------ A 0.72 0.86 0.97 1.00 0.94 0.93 G 0.28 0.14 0.03 0.00 0.06 0.07 0000 --- --- --- --- 022751 00000 ------------ T 1.00 0.92 0.98 1.00 1.00 0.98 C 0.00 0.08 0.02 0.00 0.00 0.02 0000 --- --- --- --- 022797 00000 ------------ T 0.75 0.88 0.95 1.00 0.94 0.92 C 0.25 0.12 0.05 0.00 0.06 0.08 0000 --- --- --- --- 022908 00000 ------------ - 0.14 0.30 0.31 0.31 0.21 0.25 + 0.86 0.70 0.69 0.69 0.79 0.75 0000 --- --- --- --- 023236 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 023498 00000 ------------ G 0.86 0.79 0.66 0.77 0.87 0.78 A 0.14 0.21 0.34 0.23 0.13 0.22 0000 --- --- --- --- 023978 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 024148 00000 ------------ A 1.00 0.94 1.00 1.00 1.00 0.99 G 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 024164 00000 ------------ - 0.25 0.71 0.53 0.39 0.19 0.39 + 0.75 0.29 0.47 0.61 0.81 0.61 0000 --- --- --- --- 024347 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 024405 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 025418 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 025535 00000 ------------ A 1.00 0.92 1.00 0.98 1.00 0.98 G 0.00 0.08 0.00 0.02 0.00 0.02 0000 --- --- --- --- 025745 00000 ------------ C 1.00 1.00 1.00 0.93 1.00 0.98 T 0.00 0.00 0.00 0.07 0.00 0.02 0000 --- --- --- --- 026058 00000 ------------ A 1.00 0.96 1.00 0.98 1.00 0.99 G 0.00 0.04 0.00 0.02 0.00 0.01 0000 --- --- --- --- 026171 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 026291 00000 ------------ A 0.96 1.00 1.00 0.98 1.00 0.99 G 0.04 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 026332 00000 ------------ A 0.96 1.00 1.00 0.98 1.00 0.99 G 0.04 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 026443 00000 ------------ - 0.00 0.00 0.03 0.00 0.00 0.01 + 1.00 1.00 0.97 1.00 1.00 0.99 0000 --- --- --- --- 026658 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 026930 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 027006 00000 ------------ T 0.50 0.68 0.82 0.64 0.50 0.63 C 0.50 0.32 0.18 0.36 0.50 0.37 0000 --- --- --- --- 027099 00000 ------------ G 1.00 0.94 1.00 1.00 1.00 0.99 A 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 027397 00000 ------------ A 0.91 1.00 1.00 1.00 1.00 0.99 G 0.09 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 027581 00000 ------------ - 0.96 0.95 0.95 0.89 0.97 0.94 + 0.04 0.05 0.05 0.11 0.03 0.06 0000 --- --- --- --- 027936 00000 ------------ C 1.00 0.95 1.00 1.00 1.00 0.99 G 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 028264 00000 ------------ A 1.00 0.95 1.00 1.00 1.00 0.99 G 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 028371 00000 ------------ T 0.91 1.00 1.00 1.00 1.00 0.99 A 0.09 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 028462 00000 ------------ T 1.00 1.00 1.00 1.00 0.97 0.99 G 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 028632 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 028742 00000 ------------ A 1.00 1.00 1.00 0.93 0.96 0.97 G 0.00 0.00 0.00 0.07 0.04 0.03 0000 --- --- --- --- 029228 00000 ------------ A 0.65 0.85 0.95 1.00 0.93 0.91 G 0.35 0.15 0.05 0.00 0.07 0.09 0000 --- --- --- --- 029297 00000 ------------ A 0.71 0.71 0.98 1.00 0.94 0.90 T 0.29 0.29 0.02 0.00 0.06 0.10 0000 --- --- --- --- 029510 00000 ------------ A 0.77 0.71 0.23 0.55 0.77 0.58 G 0.23 0.29 0.77 0.45 0.23 0.42 0000 --- --- --- --- 029968 00000 ------------ C 0.88 1.00 0.95 0.76 0.58 0.81 A 0.12 0.00 0.05 0.24 0.42 0.19 0000 --- --- --- --- 029994 00000 ------------ T 0.88 1.00 0.98 1.00 1.00 0.98 C 0.12 0.00 0.02 0.00 0.00 0.02 0000 --- --- --- --- 030286 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 030697 00000 ------------ G 1.00 0.95 1.00 1.00 1.00 0.99 T 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 030834 00000 ------------ G 0.94 1.00 0.97 0.95 1.00 0.98 A 0.06 0.00 0.03 0.05 0.00 0.02 0000 --- --- --- --- 031137 00000 ------------ G 0.89 1.00 1.00 1.00 1.00 0.98 C 0.11 0.00 0.00 0.00 0.00 0.02 0000 --- --- --- --- 031508 00000 ------------ A 0.77 0.79 1.00 1.00 0.94 0.92 T 0.23 0.21 0.00 0.00 0.06 0.08 0000 --- --- --- --- 031620 00000 ------------ - 0.62 0.59 0.07 0.27 0.48 0.36 + 0.38 0.41 0.93 0.73 0.52 0.64 0000 --- --- --- --- 031680 00000 ------------ - 0.50 0.41 0.07 0.25 0.48 0.32 + 0.50 0.59 0.93 0.75 0.52 0.68 0000 --- --- --- --- 031808 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 031980 00000 ------------ A 0.93 0.92 1.00 0.98 1.00 0.97 G 0.07 0.08 0.00 0.02 0.00 0.03 0000 --- --- --- --- 032047 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 032104 00000 ------------ G 0.89 1.00 0.93 0.77 0.59 0.81 A 0.11 0.00 0.07 0.23 0.41 0.19 0000 --- --- --- --- 032153 00000 ------------ C 0.96 0.96 1.00 0.98 1.00 0.98 T 0.04 0.04 0.00 0.02 0.00 0.02 0000 --- --- --- --- 032262 00000 ------------ C 1.00 1.00 1.00 1.00 0.96 0.99 T 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 032682 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 032739 00000 ------------ A 1.00 1.00 1.00 1.00 0.96 0.99 G 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 032812 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 033115 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 033474 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 033553 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 034086 00000 ------------ A 0.93 1.00 1.00 1.00 1.00 0.99 T 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 034181 00000 ------------ A 1.00 1.00 1.00 1.00 0.96 0.99 C 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 034258 00000 ------------ T 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 034445 00000 ------------ A 0.96 0.95 1.00 0.98 1.00 0.98 G 0.04 0.05 0.00 0.02 0.00 0.02 0000 --- --- --- --- 034682 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 034778 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 C 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 034832 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 G 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 034870 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 034880 00000 ------------ T 1.00 1.00 1.00 1.00 0.94 0.98 C 0.00 0.00 0.00 0.00 0.06 0.02 0000 --- --- --- --- 034920 00000 ------------ C 0.97 0.96 1.00 1.00 1.00 0.99 T 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 034942 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 035027 00000 ------------ C 0.92 0.96 1.00 1.00 1.00 0.98 A 0.08 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 035067 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 035164 00000 ------------ T 0.50 0.71 0.86 0.73 0.52 0.67 G 0.50 0.29 0.14 0.27 0.48 0.33 0000 --- --- --- --- 035271 00000 ------------ A 0.92 1.00 1.00 1.00 1.00 0.99 G 0.08 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 035281 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 035287 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 035503 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 035609 00000 ------------ A 0.92 0.95 1.00 1.00 1.00 0.98 G 0.08 0.05 0.00 0.00 0.00 0.02 0000 --- --- --- --- 035684 00000 ------------ - 0.12 0.09 0.21 0.16 0.31 0.19 + 0.88 0.91 0.79 0.84 0.69 0.81 0000 --- --- --- --- 035702 00000 ------------ A 0.75 0.88 0.90 0.76 0.57 0.76 G 0.25 0.12 0.10 0.24 0.43 0.24 0000 --- --- --- --- 036029 01658 3' UTR A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 036219 01848 3' UTR G 1.00 0.96 1.00 0.98 1.00 0.99 A 0.00 0.04 0.00 0.02 0.00 0.01 0000 --- --- --- --- 037092 02721 3' UTR T 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 037591 03220 3' UTR C 0.73 0.79 1.00 1.00 0.94 0.92 T 0.27 0.21 0.00 0.00 0.06 0.08 0000 --- --- --- --- 037689 03318 3' UTR G 0.75 0.79 1.00 1.00 0.94 0.92 A 0.25 0.21 0.00 0.00 0.06 0.08 0000 --- --- --- --- 037692 03321 3' UTR C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 037859 03488 3' UTR G 1.00 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 037958 03587 3' UTR A 0.75 0.77 1.00 1.00 0.94 0.91 G 0.25 0.23 0.00 0.00 0.06 0.09 0000 --- --- --- --- 038068 03697 3' UTR - 0.29 0.40 0.69 0.45 0.23 0.40 + 0.71 0.60 0.31 0.55 0.77 0.60 0000 --- --- --- --- 038245 03874 3' UTR C 1.00 0.88 1.00 1.00 1.00 0.98 T 0.00 0.12 0.00 0.00 0.00 0.02 0000 --- --- --- --- 038350 03979 3' UTR A 0.95 1.00 1.00 1.00 1.00 0.99 G 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 038359 03988 3' UTR A 0.96 0.92 1.00 1.00 0.94 0.97 G 0.04 0.08 0.00 0.00 0.06 0.03 0000 --- --- --- --- 038725 04354 3' UTR A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 039118 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 039360 00000 ------------ G 0.93 1.00 1.00 1.00 1.00 0.99 A 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 039584 00000 ------------ A 1.00 0.96 0.95 0.89 0.98 0.95 G 0.00 0.04 0.05 0.11 0.02 0.05 0000 --- --- --- --- 039784 00000 ------------ C 0.95 1.00 1.00 1.00 1.00 0.99 T 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 039864 00000 ------------ T 0.95 0.94 1.00 0.98 1.00 0.98 C 0.05 0.06 0.00 0.02 0.00 0.02 0000 --- --- --- --- 039877 00000 ------------ C 0.95 0.95 1.00 0.98 1.00 0.98 T 0.05 0.05 0.00 0.02 0.00 0.02 0000 --- --- --- --- 039927 00000 ------------ G 1.00 0.91 0.98 1.00 1.00 0.98 A 0.00 0.09 0.02 0.00 0.00 0.02 0000 --- --- --- --- 040198 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 040285 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000307: A 002796: T 003311: GTAA 004516: T 005645: A 011787: TGCC 012734: T 014622: TTTTT 018632: TAA 020315: TG 020981: A 022908: TTTT 024164: TCTT 026443: C 027581: T 031620: T 031680: T 035684: ATTT 038068: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele3 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq 011583 C 0.03 0.00 0.00 0.00 0.00 0.01 G 0.00 0.00 0.00 0.00 0.02 0.01 T 0.97 1.00 1.00 1.00 0.98 0.99