Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 000105 AA 0 0 0 0 0 AT 0 0 1 0 1 TT 22 22 21 24 89 0.000 0.000 0.012 0.000 0.003 000163 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 22 21 22 24 89 0.000 0.012 0.000 0.000 0.003 000283 CC 22 22 22 22 88 CG 0 0 0 2 2 GG 0 0 0 0 0 0.000 0.000 0.000 0.045 0.011 000463 -- 2 13 13 11 39 +- 11 7 9 9 36 ++ 9 1 0 4 14 0.279 0.002 1.455 0.780 1.318 000493 AA 23 21 22 15 81 AG 0 0 0 8 8 GG 0 0 0 1 1 0.000 0.000 0.000 0.003 2.105 000925 CC 0 0 0 1 1 CG 10 4 4 2 20 GG 9 17 18 21 65 2.423 0.233 0.220 4.959 0.155 001311 AA 0 0 0 0 0 AG 1 1 0 0 2 GG 25 21 22 24 92 0.010 0.012 0.000 0.000 0.011 001524 CC 23 22 22 24 91 CT 4 0 0 0 4 TT 0 0 0 0 0 0.173 0.000 0.000 0.000 0.044 001547 AA 0 0 5 4 9 AG 7 7 10 10 34 GG 17 15 7 10 49 0.700 0.787 0.153 0.296 0.722 001637 AA 24 22 22 23 91 AC 0 0 0 1 1 CC 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 001675 AA 26 21 22 24 93 AT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 001819 -- 1 9 2 1 13 +- 8 12 11 11 42 ++ 17 1 9 12 39 0.002 1.455 0.279 0.618 0.098 002098 AA 26 22 22 24 94 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 002394 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 002414 CC 2 15 13 11 41 CG 14 7 9 9 39 GG 11 0 0 4 15 0.750 0.787 1.455 0.780 1.202 003314 AA 1 6 2 1 10 AG 3 8 9 11 31 GG 18 2 9 12 41 2.296 0.071 0.013 0.618 1.138 003334 AA 1 7 2 1 11 AC 7 9 9 11 36 CC 14 2 9 12 37 0.011 0.126 0.013 0.618 0.227 003401 AA 0 0 0 0 0 AG 0 0 0 2 2 GG 22 22 19 22 85 0.000 0.000 0.000 0.045 0.012 003451 CC 21 19 17 24 81 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.015 0.000 0.003 003509 CC 0 0 5 4 9 CT 3 6 7 10 26 TT 19 15 7 10 51 0.118 0.583 1.235 0.296 3.648 003619 CC 0 0 5 4 9 CG 6 6 8 10 30 GG 13 13 6 10 42 0.668 0.668 0.460 0.296 1.013 004201 CC 0 0 0 0 0 CT 2 0 1 0 3 TT 24 22 21 24 91 0.042 0.000 0.012 0.000 0.025 004885 CC 22 21 22 24 89 CT 4 0 0 0 4 TT 0 0 0 0 0 0.181 0.000 0.000 0.000 0.045 005046 CC 17 2 9 12 40 CT 9 10 12 11 42 TT 0 9 1 1 11 1.139 0.107 1.455 0.618 0.000 005103 -- 0 0 0 0 0 +- 4 0 0 0 4 ++ 22 21 22 24 89 0.181 0.000 0.000 0.000 0.045 005121 CC 0 9 1 1 11 CT 9 10 12 11 42 TT 13 2 9 12 36 1.455 0.107 1.455 0.618 0.054 005151 CC 0 0 0 0 0 CG 3 2 7 5 17 GG 21 19 15 19 74 0.107 0.053 0.787 0.324 0.966 005215 CC 25 21 22 24 92 CG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 005263 AA 0 9 1 1 11 AG 9 10 12 11 42 GG 17 2 9 12 40 1.139 0.107 1.455 0.618 0.000 005386 CC 24 18 21 24 87 CT 1 3 1 0 5 TT 0 0 0 0 0 0.010 0.124 0.012 0.000 0.072 005486 CC 27 21 22 24 94 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 005617 CC 27 21 22 23 93 CG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 005736 AA 0 0 0 0 0 AG 3 3 7 5 18 GG 24 18 15 19 76 0.093 0.124 0.787 0.324 1.054 006885 CC 0 0 0 0 0 CG 4 0 0 0 4 GG 19 19 17 21 76 0.209 0.000 0.000 0.000 0.053 006958 CC 0 0 0 0 0 CT 0 0 0 2 2 TT 23 19 17 19 78 0.000 0.000 0.000 0.053 0.013 006975 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 23 19 17 20 79 0.000 0.000 0.000 0.012 0.003 007081 CC 0 0 0 0 0 CT 0 1 0 0 1 TT 27 21 22 24 94 0.000 0.012 0.000 0.000 0.003 007090 GG 17 4 9 5 35 GT 9 11 11 14 45 TT 1 7 2 5 15 0.020 0.008 0.279 0.667 0.007 007172 CC 0 0 5 4 9 CT 3 11 11 10 35 TT 24 10 6 10 50 0.093 2.644 0.000 0.296 0.607 007212 CC 0 0 0 1 1 CT 16 4 4 2 26 TT 11 17 18 21 67 4.787 0.233 0.220 4.959 0.780 007213 AA 23 21 22 24 90 AT 4 0 0 0 4 TT 0 0 0 0 0 0.173 0.000 0.000 0.000 0.044 007308 -- 23 4 10 11 48 +- 3 11 10 12 36 ++ 1 6 2 1 10 3.099 0.069 0.050 1.059 0.670 007384 CC 25 20 21 21 87 CG 2 0 1 0 3 GG 0 0 0 0 0 0.040 0.000 0.012 0.000 0.026 007618 AA 25 22 21 24 92 AG 2 0 1 0 3 GG 0 0 0 0 0 0.040 0.000 0.012 0.000 0.024 007888 CC 27 21 22 24 94 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 007926 CC 0 0 0 1 1 CG 16 4 4 2 26 GG 11 18 18 21 68 4.787 0.220 0.220 4.959 0.754 008829 AA 1 10 7 14 32 AG 8 8 12 9 37 GG 16 4 3 1 24 0.000 1.010 0.362 0.091 3.660 009491 CC 22 4 11 11 48 CG 3 12 9 12 36 GG 1 6 2 1 10 2.938 0.220 0.007 1.059 0.670 010343 CC 0 0 0 0 0 CT 4 0 0 0 4 TT 15 20 20 23 78 0.263 0.000 0.000 0.000 0.051 010398 AA 4 0 0 1 5 AT 13 5 4 2 24 TT 7 17 17 21 62 0.243 0.362 0.233 4.959 1.585 010410 CC 0 0 0 0 0 CT 4 1 0 0 5 TT 20 21 21 23 85 0.198 0.012 0.000 0.000 0.073 010438 AA 0 0 0 0 0 AG 2 8 8 5 23 GG 22 14 13 19 68 0.045 1.086 1.163 0.324 1.904 010572 AA 5 2 2 1 10 AT 13 8 8 7 36 TT 6 12 11 16 45 0.174 0.153 0.093 0.044 0.464 010586 -- 13 0 6 3 22 +- 10 11 11 13 45 ++ 1 11 4 8 24 0.296 2.444 0.069 0.421 0.010 010756 AA 19 15 10 12 56 AG 0 4 8 9 21 GG 0 0 2 2 4 0.000 0.263 0.045 0.028 1.127 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000463: a 001819: T 005103: g 007308: c 010586: ta