Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq ED-freq ED-freq Total-freq Allele2 AD-freq AD-freq ED-freq ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000130 00000 ------------ T 0.93 0.91 1.00 1.00 1.00 0.98 A 0.07 0.09 0.00 0.00 0.00 0.02 0000 --- --- --- --- 000134 00000 ------------ - 0.07 0.09 0.00 0.00 0.00 0.02 + 0.93 0.91 1.00 1.00 1.00 0.98 0000 --- --- --- --- 000145 00000 ------------ A 1.00 1.00 0.98 0.98 1.00 0.99 G 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 000420 00000 ------------ A 0.83 0.94 0.59 0.59 0.24 0.57 G 0.17 0.06 0.41 0.41 0.76 0.43 0000 --- --- --- --- 000516 00000 ------------ A 0.93 0.96 1.00 1.00 0.88 0.95 G 0.07 0.04 0.00 0.00 0.12 0.05 0000 --- --- --- --- 000522 00000 ------------ A 0.47 0.83 0.50 0.52 1.00 0.67 T 0.53 0.17 0.50 0.48 0.00 0.33 0000 --- --- --- --- 000739 00000 ------------ G 0.47 0.83 0.48 0.50 0.98 0.65 A 0.53 0.17 0.52 0.50 0.02 0.35 0000 --- --- --- --- 000783 00000 ------------ C 0.97 0.79 1.00 1.00 1.00 0.97 G 0.03 0.21 0.00 0.00 0.00 0.03 0000 --- --- --- --- 000793 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000816 00000 ------------ T 0.37 0.71 0.41 0.48 0.98 0.60 C 0.63 0.29 0.59 0.52 0.02 0.40 0000 --- --- --- --- 001177 00000 ------------ G 1.00 1.00 0.95 0.97 1.00 0.98 T 0.00 0.00 0.05 0.03 0.00 0.02 0000 --- --- --- --- 001211 00000 ------------ C 0.93 0.92 1.00 1.00 1.00 0.98 T 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 001255 00000 ------------ C 0.40 0.75 0.48 0.48 0.98 0.63 G 0.60 0.25 0.52 0.52 0.02 0.37 0000 --- --- --- --- 001775 00000 ------------ T 0.96 0.95 0.93 1.00 1.00 0.97 C 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 001821 00000 ------------ - 0.00 0.00 0.02 0.00 0.00 0.01 + 1.00 1.00 0.98 1.00 1.00 0.99 0000 --- --- --- --- 001825 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001840 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001857 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 002104 00000 ------------ A 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 009269 00000 ------------ A 0.70 0.77 0.82 0.86 0.75 0.79 G 0.30 0.23 0.18 0.14 0.25 0.21 0000 --- --- --- --- 009405 00000 ------------ C 1.00 1.00 1.00 1.00 0.90 0.97 T 0.00 0.00 0.00 0.00 0.10 0.03 0000 --- --- --- --- 009406 00000 ------------ G 1.00 1.00 1.00 0.98 0.88 0.96 A 0.00 0.00 0.00 0.02 0.12 0.04 0000 --- --- --- --- 009444 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 009475 00000 ------------ C 0.97 0.95 0.93 1.00 1.00 0.97 T 0.03 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 009673 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010152 00000 ------------ T 1.00 1.00 0.93 1.00 1.00 0.98 C 0.00 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 010280 00000 ------------ T 1.00 0.95 0.95 1.00 1.00 0.98 C 0.00 0.05 0.05 0.00 0.00 0.02 0000 --- --- --- --- 010297 00000 ------------ T 1.00 0.91 0.86 0.93 1.00 0.94 C 0.00 0.09 0.14 0.07 0.00 0.06 0000 --- --- --- --- 010373 00000 ------------ G 1.00 1.00 0.93 0.95 1.00 0.97 A 0.00 0.00 0.07 0.05 0.00 0.03 0000 --- --- --- --- 010421 00000 ------------ C 1.00 0.94 0.93 0.95 1.00 0.97 T 0.00 0.06 0.07 0.05 0.00 0.03 0000 --- --- --- --- 010634 00000 ------------ A 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 010960 00000 ------------ A 0.97 0.96 0.93 0.95 1.00 0.96 T 0.03 0.04 0.07 0.05 0.00 0.04 0000 --- --- --- --- 011052 00000 ------------ - 0.00 0.04 0.00 0.00 0.00 0.01 + 1.00 0.96 1.00 1.00 1.00 0.99 0000 --- --- --- --- 011107 00000 ------------ G 0.60 0.46 0.66 0.80 0.75 0.68 C 0.40 0.54 0.34 0.20 0.25 0.32 0000 --- --- --- --- 011544 00000 ------------ T 0.97 0.94 0.95 1.00 1.00 0.98 G 0.03 0.06 0.05 0.00 0.00 0.02 0000 --- --- --- --- 011561 00000 ------------ T 0.97 0.94 0.92 0.98 1.00 0.96 C 0.03 0.06 0.08 0.02 0.00 0.04 0000 --- --- --- --- 011838 00000 ------------ G 0.96 1.00 0.84 0.88 0.86 0.89 A 0.04 0.00 0.16 0.12 0.14 0.11 0000 --- --- --- --- 012244 00000 ------------ G 1.00 1.00 1.00 1.00 0.85 0.96 A 0.00 0.00 0.00 0.00 0.15 0.04 0000 --- --- --- --- 012300 00000 ------------ G 0.97 0.94 0.97 1.00 1.00 0.98 A 0.03 0.06 0.03 0.00 0.00 0.02 0000 --- --- --- --- 012554 00000 ------------ G 1.00 0.94 1.00 1.00 1.00 0.99 T 0.00 0.06 0.00 0.00 0.00 0.01 0000 --- --- --- --- 012922 00000 ------------ G 0.93 0.92 0.84 0.93 1.00 0.93 A 0.07 0.08 0.16 0.07 0.00 0.07 0000 --- --- --- --- 013022 00000 ------------ C 0.97 0.96 0.93 1.00 1.00 0.97 A 0.03 0.04 0.07 0.00 0.00 0.03 0000 --- --- --- --- 013089 00000 ------------ T 0.93 0.92 0.84 0.93 1.00 0.93 C 0.07 0.08 0.16 0.07 0.00 0.07 0000 --- --- --- --- 013118 00000 ------------ A 1.00 1.00 1.00 1.00 0.92 0.98 G 0.00 0.00 0.00 0.00 0.08 0.02 0000 --- --- --- --- 013433 00000 ------------ A 0.93 0.92 1.00 1.00 1.00 0.98 G 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 013666 00000 ------------ T 1.00 1.00 0.98 0.98 1.00 0.99 C 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 013724 00000 ------------ - 0.03 0.08 0.16 0.24 0.00 0.11 + 0.97 0.92 0.84 0.76 1.00 0.89 0000 --- --- --- --- 014038 00000 ------------ A 0.97 0.95 0.93 1.00 1.00 0.97 C 0.03 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 014080 00000 ------------ C 1.00 1.00 0.91 0.76 0.50 0.80 T 0.00 0.00 0.09 0.24 0.50 0.20 0000 --- --- --- --- 014305 00000 ------------ A 1.00 0.95 1.00 1.00 1.00 0.99 C 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014323 00000 ------------ C 0.97 1.00 0.93 1.00 1.00 0.98 T 0.03 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 014338 00000 ------------ G 0.97 1.00 0.93 1.00 1.00 0.98 A 0.03 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 014346 00000 ------------ G 0.97 0.95 1.00 1.00 1.00 0.99 A 0.03 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014538 00000 ------------ G 0.97 1.00 0.93 1.00 1.00 0.98 A 0.03 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 014806 00000 ------------ G 0.83 0.90 1.00 1.00 1.00 0.96 A 0.17 0.10 0.00 0.00 0.00 0.04 0000 --- --- --- --- 014892 00000 ------------ T 0.97 0.95 0.93 0.95 1.00 0.96 G 0.03 0.05 0.07 0.05 0.00 0.04 0000 --- --- --- --- 016694 00000 ------------ G 0.96 0.94 0.94 0.97 1.00 0.97 A 0.04 0.06 0.06 0.03 0.00 0.03 0000 --- --- --- --- 016786 00000 ------------ G 0.96 1.00 0.92 1.00 1.00 0.97 T 0.04 0.00 0.08 0.00 0.00 0.03 0000 --- --- --- --- 017254 00000 ------------ T 0.96 0.95 0.92 1.00 1.00 0.97 C 0.04 0.05 0.08 0.00 0.00 0.03 0000 --- --- --- --- 017290 00000 ------------ T 0.96 1.00 0.92 1.00 1.00 0.97 C 0.04 0.00 0.08 0.00 0.00 0.03 0000 --- --- --- --- 017332 00000 ------------ T 0.96 1.00 0.92 1.00 1.00 0.97 C 0.04 0.00 0.08 0.00 0.00 0.03 0000 --- --- --- --- 017383 00000 ------------ C 1.00 1.00 0.92 1.00 1.00 0.98 T 0.00 0.00 0.08 0.00 0.00 0.02 0000 --- --- --- --- 017463 00000 ------------ T 0.96 1.00 0.78 0.62 1.00 0.86 C 0.04 0.00 0.22 0.38 0.00 0.14 0000 --- --- --- --- 017817 00000 ------------ G 0.96 0.95 0.93 1.00 1.00 0.97 A 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 017877 00000 ------------ C 0.96 0.95 0.93 1.00 1.00 0.97 T 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 017949 00000 ------------ C 0.93 0.91 0.85 0.93 1.00 0.93 T 0.07 0.09 0.15 0.07 0.00 0.07 0000 --- --- --- --- 018036 00000 ------------ C 0.96 0.95 0.93 1.00 1.00 0.97 T 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 018505 00000 ------------ - 0.00 0.00 0.06 0.00 0.00 0.01 + 1.00 1.00 0.94 1.00 1.00 0.99 0000 --- --- --- --- 018630 00000 ------------ T 1.00 1.00 1.00 1.00 0.97 0.99 C 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 018783 00000 ------------ C 0.97 0.96 0.91 0.93 1.00 0.95 T 0.03 0.04 0.09 0.07 0.00 0.05 0000 --- --- --- --- 018912 00000 ------------ C 1.00 1.00 0.98 0.98 1.00 0.99 T 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 018928 00000 ------------ G 0.97 0.96 0.91 0.93 1.00 0.95 A 0.03 0.04 0.09 0.07 0.00 0.05 0000 --- --- --- --- 019158 00000 ------------ C 0.97 0.96 0.93 1.00 1.00 0.97 G 0.03 0.04 0.07 0.00 0.00 0.03 0000 --- --- --- --- 019287 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 019349 00000 ------------ T 1.00 1.00 0.98 0.98 1.00 0.99 G 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 019402 00000 ------------ C 0.97 0.96 0.93 1.00 1.00 0.97 T 0.03 0.04 0.07 0.00 0.00 0.03 0000 --- --- --- --- 024115 00000 ------------ G 0.96 0.95 0.93 1.00 1.00 0.97 A 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 024249 00000 ------------ A 0.92 0.90 0.83 0.93 1.00 0.92 G 0.08 0.10 0.17 0.07 0.00 0.08 0000 --- --- --- --- 024253 00000 ------------ C 0.96 0.95 0.90 0.93 0.98 0.94 G 0.04 0.05 0.10 0.07 0.02 0.06 0000 --- --- --- --- 024287 00000 ------------ C 0.96 0.95 0.93 1.00 1.00 0.97 T 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 024335 00000 ------------ C 0.96 0.95 0.93 1.00 1.00 0.97 A 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 024339 00000 ------------ A 1.00 1.00 0.95 0.95 1.00 0.98 T 0.00 0.00 0.05 0.05 0.00 0.02 0000 --- --- --- --- 024405 00000 ------------ A 1.00 1.00 0.90 0.79 0.45 0.79 C 0.00 0.00 0.10 0.21 0.55 0.21 0000 --- --- --- --- 024466 00000 ------------ G 0.96 0.95 0.93 1.00 1.00 0.97 A 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 024510 00000 ------------ T 0.96 0.95 0.93 1.00 1.00 0.97 C 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 024569 00000 ------------ C 0.92 0.90 0.82 0.93 1.00 0.92 T 0.08 0.10 0.17 0.07 0.00 0.08 0000 --- --- --- --- 024693 00000 ------------ C 0.96 0.95 0.93 1.00 1.00 0.97 T 0.04 0.05 0.07 0.00 0.00 0.03 0000 --- --- --- --- 024704 00000 ------------ G 0.92 0.90 0.82 0.90 0.88 0.88 T 0.08 0.10 0.17 0.10 0.12 0.12 0000 --- --- --- --- 024722 00000 ------------ T 0.92 0.90 0.82 0.93 1.00 0.92 C 0.08 0.10 0.17 0.07 0.00 0.08 0000 --- --- --- --- 024814 00000 ------------ T 0.90 0.92 1.00 1.00 1.00 0.97 C 0.10 0.08 0.00 0.00 0.00 0.03 0000 --- --- --- --- 025033 00000 ------------ C 1.00 1.00 0.93 0.95 1.00 0.97 T 0.00 0.00 0.07 0.05 0.00 0.03 0000 --- --- --- --- 025071 00000 ------------ G 0.93 0.92 1.00 1.00 1.00 0.98 A 0.07 0.08 0.00 0.00 0.00 0.02 0000 --- --- --- --- 025305 01092 SYNON A 0.93 0.92 0.84 0.93 1.00 0.92 G 0.07 0.08 0.16 0.07 0.00 0.08 0337 CCA CCG PRO(P) PRO(P) 026200 00000 ------------ C 0.96 0.95 1.00 1.00 1.00 0.99 T 0.04 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 026201 00000 ------------ G 1.00 1.00 0.97 0.97 1.00 0.99 A 0.00 0.00 0.03 0.03 0.00 0.01 0000 --- --- --- --- 026264 00000 ------------ C 0.96 1.00 0.87 0.93 1.00 0.95 T 0.04 0.00 0.13 0.07 0.00 0.05 0000 --- --- --- --- 035237 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 035284 00000 ------------ C 1.00 1.00 0.97 1.00 1.00 0.99 T 0.00 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 035332 00000 ------------ - 0.97 1.00 0.97 1.00 1.00 0.99 + 0.03 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 035373 00000 ------------ C 0.89 1.00 0.94 0.85 1.00 0.93 G 0.11 0.00 0.06 0.15 0.00 0.07 0000 --- --- --- --- 035406 00000 ------------ G 0.86 1.00 0.90 0.85 1.00 0.92 A 0.14 0.00 0.10 0.15 0.00 0.08 0000 --- --- --- --- 035487 00000 ------------ C 1.00 1.00 1.00 0.97 1.00 0.99 T 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 035771 00000 ------------ A 0.92 0.91 1.00 0.97 1.00 0.97 T 0.08 0.09 0.00 0.03 0.00 0.03 0000 --- --- --- --- 035952 00000 ------------ - 0.97 1.00 0.97 1.00 1.00 0.99 + 0.03 0.00 0.03 0.00 0.00 0.01 0000 --- --- --- --- 035987 00000 ------------ T 0.90 0.86 1.00 0.98 0.88 0.93 C 0.10 0.14 0.00 0.02 0.12 0.07 0000 --- --- --- --- 036012 00000 ------------ C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 036196 00000 ------------ A 1.00 1.00 0.91 0.93 1.00 0.96 G 0.00 0.00 0.09 0.07 0.00 0.04 0000 --- --- --- --- 036222 00000 ------------ T 1.00 1.00 0.98 0.98 1.00 0.99 G 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 036400 01279 NON-SYN C 1.00 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.00 0.02 0.01 0400 CCC GCC PRO(P) ALA(A) 036543 00000 ------------ C 1.00 1.00 1.00 1.00 0.90 0.97 G 0.00 0.00 0.00 0.00 0.10 0.03 0000 --- --- --- --- 036664 00000 ------------ G 0.97 0.96 0.93 1.00 1.00 0.97 T 0.03 0.04 0.07 0.00 0.00 0.03 0000 --- --- --- --- 036776 00000 ------------ C 0.90 0.92 1.00 1.00 1.00 0.97 T 0.10 0.08 0.00 0.00 0.00 0.03 0000 --- --- --- --- 036877 00000 ------------ C 0.61 0.50 0.79 0.86 0.75 0.73 A 0.39 0.50 0.21 0.14 0.25 0.27 0000 --- --- --- --- 037209 00000 ------------ C 1.00 1.00 1.00 1.00 0.94 0.98 T 0.00 0.00 0.00 0.00 0.06 0.02 0000 --- --- --- --- 037587 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 037588 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 039651 01599 NON-SYN G 1.00 0.91 1.00 1.00 1.00 0.99 T 0.00 0.09 0.00 0.00 0.00 0.01 0506 AGG AGT ARG(R) SER(S) 040173 02121 3' UTR - 0.96 1.00 0.97 0.94 0.95 0.96 + 0.04 0.00 0.03 0.06 0.05 0.04 0000 --- --- --- --- 040498 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 G 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 040532 00000 ------------ T 0.97 0.96 0.93 1.00 1.00 0.97 C 0.03 0.04 0.07 0.00 0.00 0.03 0000 --- --- --- --- 040692 00000 ------------ T 1.00 1.00 0.91 0.93 1.00 0.96 G 0.00 0.00 0.09 0.07 0.00 0.04 0000 --- --- --- --- 040732 00000 ------------ A 0.97 0.96 0.93 1.00 1.00 0.97 G 0.03 0.04 0.07 0.00 0.00 0.03 0000 --- --- --- --- 040972 00000 ------------ G 1.00 1.00 1.00 0.98 0.89 0.97 A 0.00 0.00 0.00 0.02 0.11 0.03 0000 --- --- --- --- 041261 00000 ------------ C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 041299 00000 ------------ C 1.00 1.00 0.95 1.00 1.00 0.99 G 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 041460 00000 ------------ - 0.41 0.44 0.24 0.14 0.26 0.27 + 0.59 0.56 0.76 0.86 0.74 0.73 0000 --- --- --- --- 041485 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 041500 00000 ------------ - 0.96 1.00 0.94 1.00 1.00 0.98 + 0.04 0.00 0.06 0.00 0.00 0.02 0000 --- --- --- --- 041597 00000 ------------ T 0.58 0.56 0.68 0.78 0.74 0.69 C 0.42 0.44 0.32 0.22 0.26 0.31 0000 --- --- --- --- 041643 00000 ------------ G 0.96 1.00 0.95 1.00 1.00 0.98 A 0.04 0.00 0.05 0.00 0.00 0.02 0000 --- --- --- --- 041665 00000 ------------ - 0.96 1.00 0.90 0.93 1.00 0.95 + 0.04 0.00 0.10 0.07 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000134: T 001821: T 011052: A 013724: T 018505: TCAC 035332: G 035952: GA 040173: T 041460: A 041500: TAAG 041665: AT