Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000388 00000 ------------ G 0.933 0.864 1.000 1.000 1.000 0.967 A 0.067 0.136 0.000 0.000 0.000 0.033 0000 --- --- --- --- 000843 00000 ------------ A 1.000 1.000 0.975 1.000 1.000 0.994 G 0.000 0.000 0.025 0.000 0.000 0.006 0000 --- --- --- --- 000850 00000 ------------ T 0.821 0.864 0.950 1.000 0.905 0.918 C 0.179 0.136 0.050 0.000 0.095 0.082 0000 --- --- --- --- 000955 00000 ------------ T 0.933 0.864 1.000 1.000 1.000 0.970 C 0.067 0.136 0.000 0.000 0.000 0.030 0000 --- --- --- --- 001110 00000 ------------ G 0.800 0.800 0.816 0.895 1.000 0.875 C 0.200 0.200 0.184 0.105 0.000 0.125 0000 --- --- --- --- 001135 00000 ------------ G 0.964 1.000 1.000 1.000 1.000 0.994 T 0.036 0.000 0.000 0.000 0.000 0.006 0000 --- --- --- --- 002318 00000 ------------ C 1.000 1.000 1.000 1.000 0.977 0.994 T 0.000 0.000 0.000 0.000 0.023 0.006 0000 --- --- --- --- 002458 00000 ------------ C 0.800 0.875 0.762 0.900 1.000 0.872 T 0.200 0.125 0.238 0.100 0.000 0.128 0000 --- --- --- --- 002648 00000 ------------ - 0.083 0.125 0.000 0.026 0.000 0.037 + 0.917 0.875 1.000 0.974 1.000 0.963 0000 --- --- --- --- 003457 00000 ------------ - 0.192 0.150 0.250 0.067 0.000 0.130 + 0.808 0.850 0.750 0.933 1.000 0.870 0000 --- --- --- --- 003637 00000 ------------ G 1.000 0.917 1.000 1.000 1.000 0.988 A 0.000 0.083 0.000 0.000 0.000 0.012 0000 --- --- --- --- 003680 00000 ------------ - 0.208 0.167 0.200 0.125 0.000 0.130 + 0.792 0.833 0.800 0.875 1.000 0.870 0000 --- --- --- --- 003738 00000 ------------ - 0.833 0.812 0.833 0.929 1.000 0.899 + 0.167 0.188 0.167 0.071 0.000 0.101 0000 --- --- --- --- 004099 00000 ------------ A 1.000 0.958 1.000 1.000 1.000 0.995 G 0.000 0.042 0.000 0.000 0.000 0.005 0000 --- --- --- --- 004502 00239 NON-SYN G 0.857 1.000 0.763 0.735 0.567 0.770 A 0.143 0.000 0.237 0.265 0.433 0.230 0010 GTC ATC VAL(V) ILE(I) 004699 00000 ------------ C 1.000 0.950 1.000 1.000 1.000 0.993 G 0.000 0.050 0.000 0.000 0.000 0.007 0000 --- --- --- --- 005332 00373 SYNON G 0.615 0.700 0.735 0.889 0.952 0.804 T 0.385 0.300 0.265 0.111 0.048 0.196 0054 CGG CGT ARG(R) ARG(R) 005668 00618 NON-SYN T 0.750 0.700 0.789 0.900 1.000 0.850 C 0.250 0.300 0.211 0.100 0.000 0.150 0136 CTC CCC LEU(L) PRO(P) 005756 00000 ------------ G 1.000 0.958 1.000 1.000 1.000 0.994 A 0.000 0.042 0.000 0.000 0.000 0.006 0000 --- --- --- --- 005764 00000 ------------ G 1.000 0.958 1.000 1.000 1.000 0.994 A 0.000 0.042 0.000 0.000 0.000 0.006 0000 --- --- --- --- 005862 00700 SYNON T 1.000 0.958 1.000 1.000 1.000 0.992 C 0.000 0.042 0.000 0.000 0.000 0.008 0163 CCT CCC PRO(P) PRO(P) 006186 00000 ------------ C 0.708 0.727 0.762 0.921 1.000 0.845 A 0.292 0.273 0.238 0.079 0.000 0.155 0000 --- --- --- --- 006219 00000 ------------ G 1.000 0.955 1.000 1.000 1.000 0.994 A 0.000 0.045 0.000 0.000 0.000 0.006 0000 --- --- --- --- 006297 00000 ------------ C 0.773 0.864 0.773 0.905 1.000 0.874 T 0.227 0.136 0.227 0.095 0.000 0.126 0000 --- --- --- --- 006337 00000 ------------ G 1.000 1.000 0.977 1.000 1.000 0.994 A 0.000 0.000 0.023 0.000 0.000 0.006 0000 --- --- --- --- 006536 00000 ------------ G 1.000 0.958 1.000 1.000 1.000 0.995 A 0.000 0.042 0.000 0.000 0.000 0.005 0000 --- --- --- --- 006637 00895 SYNON C 0.967 0.917 1.000 1.000 1.000 0.984 T 0.033 0.083 0.000 0.000 0.000 0.016 0228 AAC AAT ASN(N) ASN(N) 006655 00913 SYNON T 0.733 0.708 0.773 0.886 1.000 0.842 C 0.267 0.292 0.227 0.114 0.000 0.158 0234 CGT CGC ARG(R) ARG(R) 006815 00000 ------------ A 0.967 0.917 1.000 1.000 1.000 0.984 G 0.033 0.083 0.000 0.000 0.000 0.016 0000 --- --- --- --- 007158 00000 ------------ A 0.967 0.917 0.773 0.909 1.000 0.911 G 0.033 0.083 0.227 0.091 0.000 0.089 0000 --- --- --- --- 007248 00994 SYNON C 1.000 1.000 1.000 0.977 1.000 0.995 T 0.000 0.000 0.000 0.023 0.000 0.005 0261 GCC GCT ALA(A) ALA(A) 007387 00000 ------------ A 0.967 0.917 1.000 1.000 1.000 0.984 G 0.033 0.083 0.000 0.000 0.000 0.016 0000 --- --- --- --- 007403 00000 ------------ G 0.967 1.000 1.000 1.000 1.000 0.995 A 0.033 0.000 0.000 0.000 0.000 0.005 0000 --- --- --- --- 007443 00000 ------------ - 0.100 0.083 0.000 0.023 0.000 0.032 + 0.900 0.917 1.000 0.977 1.000 0.968 0000 --- --- --- --- 007846 00000 ------------ G 0.967 1.000 1.000 1.000 1.000 0.995 A 0.033 0.000 0.000 0.000 0.000 0.005 0000 --- --- --- --- 008114 01373 NON-SYN G 0.893 0.864 0.705 0.421 0.565 0.657 A 0.107 0.136 0.295 0.579 0.435 0.343 0388 GGG AGG GLY(G) ARG(R) 008454 00000 ------------ G 1.000 1.000 1.000 1.000 0.975 0.995 A 0.000 0.000 0.000 0.000 0.025 0.005 0000 --- --- --- --- 008479 00000 ------------ C 1.000 0.958 1.000 1.000 1.000 0.994 T 0.000 0.042 0.000 0.000 0.000 0.006 0000 --- --- --- --- 008493 00000 ------------ G 0.967 1.000 1.000 1.000 0.975 0.989 A 0.033 0.000 0.000 0.000 0.025 0.011 0000 --- --- --- --- 008814 00000 ------------ G 1.000 0.950 1.000 1.000 1.000 0.994 C 0.000 0.050 0.000 0.000 0.000 0.006 0000 --- --- --- --- 009011 00000 ------------ - 0.000 0.083 0.000 0.000 0.000 0.012 + 1.000 0.917 1.000 1.000 1.000 0.988 0000 --- --- --- --- 009036 00000 ------------ C 1.000 1.000 0.976 1.000 1.000 0.994 T 0.000 0.000 0.024 0.000 0.000 0.006 0000 --- --- --- --- 009185 00000 ------------ - 0.000 0.000 0.000 0.000 0.022 0.006 + 1.000 1.000 1.000 1.000 0.978 0.994 0000 --- --- --- --- 009276 00000 ------------ G 1.000 1.000 0.977 1.000 1.000 0.995 A 0.000 0.000 0.023 0.000 0.000 0.005 0000 --- --- --- --- 009282 00000 ------------ T 0.929 1.000 1.000 1.000 1.000 0.989 A 0.071 0.000 0.000 0.000 0.000 0.011 0000 --- --- --- --- 009328 00000 ------------ C 0.857 1.000 0.750 0.705 0.521 0.729 T 0.143 0.000 0.250 0.295 0.479 0.271 0000 --- --- --- --- 009445 00000 ------------ C 1.000 1.000 1.000 0.975 1.000 0.995 T 0.000 0.000 0.000 0.025 0.000 0.005 0000 --- --- --- --- 009587 00000 ------------ - 0.000 0.000 0.024 0.000 0.000 0.006 + 1.000 1.000 0.976 1.000 1.000 0.994 0000 --- --- --- --- 009723 00000 ------------ C 1.000 0.955 1.000 1.000 1.000 0.994 T 0.000 0.045 0.000 0.000 0.000 0.006 0000 --- --- --- --- 009908 00000 ------------ C 0.821 0.818 0.705 0.452 0.565 0.643 T 0.179 0.182 0.295 0.548 0.435 0.357 0000 --- --- --- --- 009934 00000 ------------ G 0.821 0.818 0.955 1.000 0.913 0.918 A 0.179 0.182 0.045 0.000 0.087 0.082 0000 --- --- --- --- 010007 00000 ------------ C 1.000 0.955 1.000 1.000 1.000 0.994 T 0.000 0.045 0.000 0.000 0.000 0.006 0000 --- --- --- --- 010434 01870 SYNON C 0.893 0.900 1.000 0.967 1.000 0.961 T 0.107 0.100 0.000 0.033 0.000 0.039 0553 GCC GCT ALA(A) ALA(A) 010600 00000 ------------ T 0.583 0.312 0.700 0.857 0.955 0.720 C 0.417 0.688 0.300 0.143 0.045 0.280 0000 --- --- --- --- 011058 00000 ------------ G 0.962 0.958 1.000 1.000 1.000 0.988 A 0.038 0.042 0.000 0.000 0.000 0.012 0000 --- --- --- --- 011316 00000 ------------ C 1.000 1.000 0.976 1.000 1.000 0.994 T 0.000 0.000 0.024 0.000 0.000 0.006 0000 --- --- --- --- 012575 02646 3' UTR A 0.962 0.955 1.000 1.000 1.000 0.988 T 0.038 0.045 0.000 0.000 0.000 0.012 0000 --- --- --- --- 012578 02649 3' UTR G 0.917 1.000 1.000 1.000 1.000 0.988 T 0.083 0.000 0.000 0.000 0.000 0.012 0000 --- --- --- --- 012943 03014 3' UTR G 0.864 0.818 0.974 1.000 0.944 0.937 A 0.136 0.182 0.026 0.000 0.056 0.063 0000 --- --- --- --- 013094 00000 ------------ G 0.929 1.000 1.000 1.000 1.000 0.989 A 0.071 0.000 0.000 0.000 0.000 0.011 0000 --- --- --- --- 013164 00000 ------------ G 0.750 0.833 0.955 1.000 0.976 0.923 A 0.250 0.167 0.045 0.000 0.024 0.077 0000 --- --- --- --- 013567 00000 ------------ - 1.000 1.000 1.000 0.977 1.000 0.994 + 0.000 0.000 0.000 0.023 0.000 0.006 0000 --- --- --- --- 013802 00000 ------------ G 0.967 1.000 1.000 1.000 1.000 0.995 A 0.033 0.000 0.000 0.000 0.000 0.005 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002648: CAG 003457: C 003680: TGTGCCCA 003738: G 007443: G 009011: G 009185: C 009587: CT 013567: G