Site CDNA-Pos Description Allele1 Total-freq Allele2 Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000204 00000 ------------ A 0.98 T 0.02 0000 --- --- --- --- 000387 00000 ------------ T 0.94 A 0.06 0000 --- --- --- --- 000438 00000 ------------ A 0.61 G 0.39 0000 --- --- --- --- 000530 00000 ------------ A 0.90 G 0.10 0000 --- --- --- --- 000541 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 000563 00000 ------------ A 0.99 T 0.01 0000 --- --- --- --- 000722 00000 ------------ A 0.99 T 0.01 0000 --- --- --- --- 000822 00000 ------------ C 0.78 T 0.22 0000 --- --- --- --- 000861 00000 ------------ T 0.86 C 0.14 0000 --- --- --- --- 001424 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 001473 00000 ------------ G 0.94 A 0.06 0000 --- --- --- --- 001544 00000 ------------ C 0.54 T 0.46 0000 --- --- --- --- 002181 00235 SYNON G 0.89 A 0.11 0034 CCG CCA PRO(P) PRO(P) 002223 00277 SYNON C 0.86 G 0.14 0048 GCC GCG ALA(A) ALA(A) 002361 00415 SYNON C 0.99 A 0.01 0094 CTC CTA LEU(L) LEU(L) 002535 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 002542 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 002581 00000 ------------ C 0.97 G 0.03 0000 --- --- --- --- 002688 00000 ------------ A 0.67 G 0.33 0000 --- --- --- --- 002737* 002745* 002753 00000 ------------ T 0.73 C 0.27 0000 --- --- --- --- 002756 00000 ------------ C 0.61 T 0.39 0000 --- --- --- --- 002840 00000 ------------ C 0.74 T 0.26 0000 --- --- --- --- 002887 00000 ------------ G 0.91 A 0.09 0000 --- --- --- --- 002909 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 002931 00000 ------------ C 0.95 T 0.05 0000 --- --- --- --- 002988 00000 ------------ - 0.26 + 0.74 0000 --- --- --- --- 003017 00000 ------------ G 0.84 C 0.16 0000 --- --- --- --- 003034 00000 ------------ G 0.74 C 0.26 0000 --- --- --- --- 003059 00000 ------------ G 0.99 C 0.01 0000 --- --- --- --- 003064 00000 ------------ - 0.99 + 0.01 0000 --- --- --- --- 003070 00000 ------------ T 0.99 G 0.01 0000 --- --- --- --- 003147 00000 ------------ C 0.58 G 0.42 0000 --- --- --- --- 003237 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 003636 00000 ------------ - 0.45 + 0.55 0000 --- --- --- --- 003708 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 003916 00000 ------------ A 0.95 G 0.05 0000 --- --- --- --- 003994 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 004365 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 004667 00000 ------------ A 0.96 G 0.04 0000 --- --- --- --- 004792 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 005076 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 005123 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 005131 00000 ------------ T 0.99 A 0.01 0000 --- --- --- --- 005425 00000 ------------ C 0.97 T 0.03 0000 --- --- --- --- 005480 00000 ------------ C 0.78 G 0.22 0000 --- --- --- --- 005506 00000 ------------ A 0.85 G 0.15 0000 --- --- --- --- 005541 00000 ------------ G 0.78 A 0.22 0000 --- --- --- --- 005817 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 005930 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 005962 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 005999 00000 ------------ G 0.96 A 0.04 0000 --- --- --- --- 006123 00000 ------------ - 0.34 + 0.66 0000 --- --- --- --- 006236 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 006242 00000 ------------ T 0.96 G 0.04 0000 --- --- --- --- 006259 00000 ------------ T 0.93 C 0.07 0000 --- --- --- --- 006703 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 006744 00000 ------------ T 0.86 G 0.14 0000 --- --- --- --- 006767 00000 ------------ A 0.99 T 0.01 0000 --- --- --- --- 006787 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 006819 00000 ------------ G 0.78 A 0.22 0000 --- --- --- --- 006970 00000 ------------ A 0.99 T 0.01 0000 --- --- --- --- 007034 00000 ------------ G 0.99 C 0.01 0000 --- --- --- --- 007125 00000 ------------ T 0.98 C 0.02 0000 --- --- --- --- 007138 00000 ------------ T 0.96 A 0.04 0000 --- --- --- --- 007180 00000 ------------ A 0.97 T 0.03 0000 --- --- --- --- 007227 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 007302 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 007342 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 007380 00000 ------------ A 0.78 T 0.22 0000 --- --- --- --- 007484 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 007549 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 007682 00000 ------------ T 0.66 G 0.34 0000 --- --- --- --- 007712 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 007725 00000 ------------ A 0.62 T 0.38 0000 --- --- --- --- 007791 00000 ------------ C 0.96 T 0.04 0000 --- --- --- --- 007870 00000 ------------ A 0.97 G 0.03 0000 --- --- --- --- 007880 00000 ------------ T 0.97 C 0.03 0000 --- --- --- --- 007894 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 007961 00000 ------------ G 0.94 A 0.06 0000 --- --- --- --- 008000 00000 ------------ C 0.97 T 0.03 0000 --- --- --- --- 008038 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 008056 00000 ------------ T 0.97 C 0.03 0000 --- --- --- --- 008066 00000 ------------ A 0.97 G 0.03 0000 --- --- --- --- 008069 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 008085 00000 ------------ C 0.98 T 0.02 0000 --- --- --- --- 008264 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 008414 00479 NON-SYN G 0.99 C 0.01 0116 GGT CGT GLY(G) ARG(R) 008680 00000 ------------ G 0.97 T 0.03 0000 --- --- --- --- 008739 00000 ------------ C 0.97 G 0.03 0000 --- --- --- --- 008812 00000 ------------ G 0.99 C 0.01 0000 --- --- --- --- 008856 00000 ------------ C 0.96 T 0.04 0000 --- --- --- --- 008960 00000 ------------ G 0.88 A 0.12 0000 --- --- --- --- 009007 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 009128 00000 ------------ - 0.99 + 0.01 0000 --- --- --- --- 009167 00000 ------------ C 0.97 G 0.03 0000 --- --- --- --- 009170 00000 ------------ T 0.94 C 0.06 0000 --- --- --- --- 009240 00000 ------------ - 0.96 + 0.04 0000 --- --- --- --- 009258 00000 ------------ T 0.97 C 0.03 0000 --- --- --- --- 009295 00000 ------------ G 0.96 A 0.04 0000 --- --- --- --- 009311 00000 ------------ C 0.96 A 0.04 0000 --- --- --- --- 009341 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 009442 00000 ------------ C 0.97 G 0.03 0000 --- --- --- --- 009614 00000 ------------ A 0.97 G 0.03 0000 --- --- --- --- 009640 00000 ------------ - 0.03 + 0.97 0000 --- --- --- --- 009771 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 009790 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 009825 00000 ------------ G 0.71 A 0.29 0000 --- --- --- --- 009916 00000 ------------ A 0.96 C 0.04 0000 --- --- --- --- 009922 00000 ------------ T 0.96 C 0.04 0000 --- --- --- --- 010027 00000 ------------ A 0.78 G 0.22 0000 --- --- --- --- 010091 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 010093 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 010099 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 010113 00000 ------------ C 0.97 T 0.03 0000 --- --- --- --- 010219 00000 ------------ C 0.99 G 0.01 0000 --- --- --- --- 010229 00000 ------------ C 0.98 G 0.02 0000 --- --- --- --- 010257 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 010261 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 010263 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 010431 00000 ------------ A 0.97 G 0.03 0000 --- --- --- --- 010456 00000 ------------ - 0.01 + 0.99 0000 --- --- --- --- 010490 00000 ------------ G 0.71 A 0.29 0000 --- --- --- --- 010502 00000 ------------ A 0.97 G 0.03 0000 --- --- --- --- 010524 00000 ------------ C 0.97 G 0.03 0000 --- --- --- --- 010548 00000 ------------ - 0.97 + 0.03 0000 --- --- --- --- 010571 00000 ------------ C 0.98 G 0.02 0000 --- --- --- --- 010584 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 010686 00000 ------------ - 0.07 + 0.93 0000 --- --- --- --- 010688 00000 ------------ C 0.96 A 0.04 0000 --- --- --- --- 010747 00000 ------------ A 0.91 C 0.09 0000 --- --- --- --- 010769 00000 ------------ A 0.99 T 0.01 0000 --- --- --- --- 010931 00656 NON-SYN C 0.99 G 0.01 0175 CCA GCA PRO(P) ALA(A) 011024 00749 NON-SYN G 0.98 A 0.02 0206 GAC AAC ASP(D) ASN(N) 011127 00852 3' UTR C 0.61 G 0.39 0000 --- --- --- --- 011155 00880 3' UTR T 0.99 C 0.01 0000 --- --- --- --- 011209 00934 3' UTR C 0.97 T 0.03 0000 --- --- --- --- 011226 00951 3' UTR C 0.94 T 0.06 0000 --- --- --- --- 011287 01012 3' UTR T 0.99 C 0.01 0000 --- --- --- --- 011493 00000 ------------ A 0.67 T 0.33 0000 --- --- --- --- 011642 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 011684 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 011815 00000 ------------ T 0.62 C 0.38 0000 --- --- --- --- 011852 00000 ------------ T 0.90 C 0.10 0000 --- --- --- --- 011869 00000 ------------ - 0.77 + 0.23 0000 --- --- --- --- 011937 00000 ------------ T 0.96 C 0.04 0000 --- --- --- --- 012191 00000 ------------ C 0.99 G 0.01 0000 --- --- --- --- 012211 00000 ------------ A 0.97 G 0.03 0000 --- --- --- --- 012263 00000 ------------ - 0.02 + 0.98 0000 --- --- --- --- 012264 00000 ------------ T 0.99 A 0.01 0000 --- --- --- --- 012400 00000 ------------ C 0.94 T 0.06 0000 --- --- --- --- 012471 00000 ------------ G 0.91 T 0.09 0000 --- --- --- --- 012476 00000 ------------ T 0.68 C 0.32 0000 --- --- --- --- 012573 00000 ------------ A 0.94 G 0.06 0000 --- --- --- --- 012603 00000 ------------ A 0.98 C 0.02 0000 --- --- --- --- 012643 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 012686 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 012773 00000 ------------ G 0.76 C 0.24 0000 --- --- --- --- 012810 00000 ------------ A 0.98 C 0.02 0000 --- --- --- --- 012926 00000 ------------ C 0.96 G 0.04 0000 --- --- --- --- 013025 00000 ------------ G 0.99 C 0.01 0000 --- --- --- --- 013094 00000 ------------ A 0.98 G 0.02 0000 --- --- --- --- 013227 00000 ------------ C 0.96 T 0.04 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002988: C 003064: G 003636: C 006123: CAAGA 007712: G 009128: T 009240: T 009640: A 010456: T 010548: A 010686: A 011869: T 012263: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 Total-freq Allele2 Total-freq Allele3 Total-freq 002737 A 0.28 G 0.58 T 0.14 002745 A 0.98 C 0.01 T 0.01