FGF11 Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

CAACCTCTCC TTCCTACCCA GGGGTGCGTT CAGGAGGCTT CCTGTCCCTC 50 | NOT SCANNED CTCCTCTGAA GGCTGAGACG TGCGGCCTTG CCTCGGCTTT GCCTGCTTGT 100 AAGACACAGT CCGCACTCTC TACCTCCAAG GAACCCCGGG GTTCCTCCTG 150 CCCGGCTTCA CCCTCCTATT TCCCAGCGTC TCCGCCCCCT GCCCCGCCCC 200 CGGGCCGGCT CTCCGAGGAG GGGGAACTGC TGTCGCCGCC GCCGCCGCCG 250 CCTCAGCTTC CCACAGCCGC TGCCGCTGCC GCCGCTCTGC CTGGTCCAGC 300 CACCGGCCCA GTGCTCTGAC TTCGCCGGAC CGGGGAGCTC TGCAGAGACA 350 CCCTCACTCC TTCCCGAGGG TCCGGGACGC CTAGCCGGGC GTGGGGGGAA 400 | NOT SCANNED GCTCCGTTTG CGGGGGACAG GGAGGGAGGA GCCTGGAGCC GAAGCCAGCG 450 CCACCCGTCG CCGGATCAAC AGGACAGGAC AGGTTGAGGG GCGTCGGGAA 500 AAGGAAGAGG GGGTGCTATA GGCAATCCCG GGGAGGACGA GGAAGCCCTG 550 TAGCAGGAAG CTGTGATCCG CTCTGACTTG TAGGGGGCCT GTTCACATCT 600 GGGGACTGGT GACAACGTGG GTGCACTCCT CTCTTGGGGG GCTGGTTAGA 650 TTGGAGGGCG TGGGATCTAA ACAGCACCAG CTGTCCCCAA GAAAATTTAA 700 GGGGCAGCCA GGGGAGAAAA AAACAAAAAC AAAAACAAAC ACGGATGCTC 750 CTCATTTTGA GGTGGCGGAA GGCCCTCCAG TCAACTACCT GGTGTATCCA 800 | var(781):[A:0.25] CTAGGAAGGG TGGATTTGGA GGTGACTTCA AAAGGAGCGG AGGGTGTGAA 850 GGTGAAGAAA GGGTCTTGGC CGCTAGAATT CTATGCTACT AGACATGGGG 900 GGGACTTGGT GAAAAAGGTA TTATCCAGCC AGAGGGTCTG GGAGCCCTGT 950 | var(927):[G:0.26] CTTACTGAAC CTGGGCAACC TGGATATTCT GAGACATATT TTGGGGGGAT 1000 TTCAGTGAAA AAAGTGGGGG ATCCCCTCCA TTTAGAGTGT AGCAAAGGAA 1050 AAAACACCAA GGTTGGGTTC CTTCCTGACA TTGGCAGTGC CCCAGTAGGG 1100 GTGGGATGAG CGAATATTCC CAAAGCTAAA GTCCCACACC CTGTAGATTA 1150 CAAGAGTGGA TTTGGCAGGA GTGTGCCCCA AAATACAGTG GAAAGGTGCC 1200 TGAAGATATT TAAACCACGT CTTGGAAATT TAGTGGGTCT TGGCTTTGGG 1250 ATAGGTGAAG TGAGGACAGA CACTGGAGAG GAGGGAAAGG GGACGTTTTC 1300 AATAGGAGGC AAAACTCGAG GGTGGGATCC ACTGAGGAGT ACATAGGCTG 1350 | var(1315):[T:0.36] | var(1336):[C:0.01] CTGGATCTGG TGGAGCCAGC ACTGGGCCCA CGGGTGGTAA CTGGCTGCTG 1400 TGGAGCAAGG TACGTGAGGG GCTGGGCCTG AACCTATCCT TATCCTCATC 1450 CTCAGGTCCT GTGGGTGGGG CAGCGAGTCG GGGCCTGAGC GTCAAGAGCA 1500 TGCCCTAGTG AGCGGGCTCC TCTGGGGGAG CCCAGCGCGC TCCGGGCGCC 1550 TGCCGGTTTG GGGGTGTCTC CTCCCGGGGC GCTATGGCGG CGCTGGCCAG 1600 | Exon 1 M A A L A S 6 TAGCCTGATC CGGCAGAAGC GGGAGGTCCG CGAGCCCGGG GGCAGCCGGC 1650 S L I R Q K R E V R E P G G S R 22 CGGTGTCGGC GCAGCGGCGC GTGTGTCCCC GCGGCACCAA GTCCCTTTGC 1700 P V S A Q R R V C P R G T K S L C 39 CAGAAGCAGC TCCTCATCCT GCTGTCCAAG GTGCGACTGT GCGGGGGGCG 1750 Q K Q L L I L L S K V R L C G G R 56 GCCCGCGCGG CCGGACCGCG GCCCGGGTGA GTGCGGCTGG GGCGGGGTCT 1800 P A R P D R G P 64 CCCGGCCAGA GGTTTCTCTG CCTGGGAGAT TGAGGCCAGG GACTCTGAAG 1850 AATAGGGCCC GGCTGAGGGG CTCCCCGAAA GTGGAAGGGG GTGGGCCAGG 1900 ACGACAAAGT CCCTGCCAGA CTGTGCCTCA GTTTCCCTTC TCTTTTGTCC 1950 ATAACCCGGA GTCTCCTTAT TTTCGAGGTC AAGGGGAAGG CTTGAGGGGC 2000 TGCCTGGCGC CCCGAAAGCC TCGTAGTTCC TGCTCGTCCC CCCTTCCCAA 2050 CACAGCAGTC CCCACCCCCA TCGTCCTCCG CCTACGTGCC GGTTCTCGCG 2100 ATTCTTTCAA TCTGGAGCGG AGGGGCCCGG GGGTTTCCAG ATGCCTGGGT 2150 | NOT SCANNED CACCCCAAGG ATTTCTGCAG CTCCAGCCGC ACGCCCCCCC CCAGCCCCCG 2200 CCTGCCCCGG TTCTCCCGCT CCTCCACGCC TGGGCTCGGT TCCTCCTGGT 2250 CGAGCTCTGC TGGCTCCGAG CCAATCTCCC CAGCTCTCCC TCGGGTGTCC 2300 TTGCAGCTAC CTCGCCAGCC AGCCCTCTAT GCGCCCTCCT CCTGTGACCT 2350 GCGCTTCAAG AACGGAGCTG GGCACCCCTC CCATAACCCC CGCGCCACTC 2400 CGAAATCGGG TCCCGTAGGC TCAGGGGACC CTACGCTGGC AGGAACTCAG 2450 ACACAGTTCA CGGCTAGAGA TGGGCGCCGA CTCGGGGGTC GTACCACCTA 2500 CAAGGGGGGA CAGGGAAGTC GGCAGAGAGC AAGCGATGGG GGAGGAGAGT 2550 TGTGAGAGTT AGAATTGGTC CCCGTCCATG TACGACAGTC AGGGAGTCCC 2600 TCTGGCCCTG CTCCCGCCCG CTCCCAGCTC CCCTAAGGGT AGCCACCTCG 2650 CGCCCTCCTC CCCGCGCCAC CGGCTGCCCA TAGTGGTACA ATCCGCAGCC 2700 CACCCTCTGA GTAGGACCGG GCCCCCACGT GACTCAGCCT GCCTCTCCAT 2750 CTCCTCAGCT CCCACCCCCC ATATCCTTGG TAAGGTCCCC CTTACCCCAG 2800 GCGAGTTACC TGGCCGAAGG GGAGAGGCTG AGCCTCAGGG AGAACTGGGC 2850 CCCCGGGAGC CAGCGGACTG ACAGACAGAC AGACAGACAG ACAGATGGGT 2900 CAGTGTCAGA CAGACAGGCC GGCGCTGGGC CAAGGCAAGG CTCTCGCCAA 2950 GCTAGCGGCA GCCGCAGCAG GTGCTGAGTC AGCGTCAGGC CCAGTCCCAC 3000 | var(2978):[A:0.01] CCCCACTCCT GAGGGAGAGC CCCTACCCTG TGGTCAATTT GCTGCTGCCA 3050 AGATCCCCCA CCTTCGCAAA CACGCTGCCC CTTCAGTACC CCTGCTGGTC 3100 TCCCTCTGTC CCTGCCTTTT GATATATCTC TCCCCTCCCT CCTCCCCCAC 3150 | var(3145):[T:0.19] TCCTTCCCCC TTCTGGTTGA GCTGTAGGGT AGGAATTAAG CCATTTAAAT 3200 AAATTTCAAT AAATTACACT GAAAGCTCCT GGTTATAGGA AACAGAAGGG 3250 ACCCACACCA GCTTTCCCAG GAGTGAAAGA GAGGTGGGAG AGAGCGTGCT 3300 TGGAGGATAA GAGAGCTGGG GCCCTGGGAC CCTCTTCCTT CCTTTCATTC 3350 TCCTTTCTTC CCTCTAATCC TGCCAAGTGT AGGAATGTTT CTGGGAACGG 3400 AGATGTCATT TTCAAAGATG AATGTCTCTC TCTCCAGAGC CTCAGCTCAA 3450 | Exon 2 E P Q L K 69 AGGCATCGTC ACCAAACTGT TCTGCCGCCA GGGTTTCTAC CTCCAGGCGA 3500 G I V T K L F C R Q G F Y L Q A 85 ATCCCGACGG AAGCATCCAG GGCACCCCAG AGGATACCAG CTCCTTCAGT 3550 N P D G S I Q G T P E D T S S F 101 GAGAGGGGAA GCTGGCTGCA GGGTGGGAAG GGGGAGAATG GGGACAGGAG 3600 ATGACAATCC TATTCCCTCT TCAGCTTCTG TTGCCATTGA TCCGTCTTCC 3650 TGACCTCTAA GGGAAAAAGT GGAGCTGGGA TGAGGGGAGC TCAGGTGAGG 3700 GTCAGAGGCC TGGGTATTGA TGCTCCCTCT CTCCACCTGC AGCCCACTTC 3750 | Exon 3 T H F 104 AACCTGATCC CTGTGGGCCT CCGTGTGGTC ACCATCCAGA GCGCCAAGCT 3800 N L I P V G L R V V T I Q S A K L 121 GGGTCACTAC ATGGCCATGA ATGCTGAGGG ACTGCTCTAC AGTTCGGTGA 3850 G H Y M A M N A E G L L Y S S 136 GACAATGAGG CTGAGTGGCC GGGAAATACT GGGGACTCCC CTTCCTCAAT 3900 TTGTCCCTTG AGGGAATGAC AACCTTCCTC AACTACAGAC ATTTTGCCCG 3950 GGACTCCTCC CTCCAGCTTT GCTGATGGCC TGTCATCGCT GCCCATTCCA 4000 | var(3988):[A:0.02] GACCAGCTCC TCTAGGGTCT CTCCAGTCCC CACTCCTTGC ACACCCCCCA 4050 AAACAGCCCC AGGTTCTTTG AATGTCCAAC TCTTTCTGCC TTTTAGGGCC 4100 | var(4082):[T:0.01] CCTACTTCTT ATCCCACCTC CTCCAGATTT TGTCATTACT CACTTCCCTA 4150 GAGTCATCCA GGATAGGGGA TAGTGAGAGA CTGGGAGTAC AGTGGAGAGA 4200 AGGAATCTTA TTGCAAGACC CCTAAAAGTC TAGTTCTTTT TTTTTTTTTT 4250 | REPEAT AAATAGTGAC AGGGTCTTGC TATGTTGGCC AGGCTGGTCT GGAACTCCTG 4300 | NOT SCANNED ACCTCAGGTG ATCCACCCGC CTCGGCCTCC CAAAGTGTTG GGATTATAGG 4350 | var(4333):[G:0.01] CATGAGCCAC TGTGCTTGGC CCAGAGCCTA GTTCTTAGCC CTCAGCCCTC 4400 TTCCTTGTCC TCCCTTTGCT CCCAGGTCCT ACATGGACTC AGAAGTTGTC 4450 CTCCCCCTCC CCCAAAAAGG TACGGATTTG TGCTTTCCAT GAGCTCCTTT 4500 | var(4469):[:0.60] CTGCCCAGTG ATGTGTCTTT TTATCTCTCT GTCTTTGTGC GCCTTTCTGG 4550 GTCTTTGTCT CCTTAGCCGC ATTTCACAGC TGAGTGTCGC TTTAAGGAGT 4600 | Exon 4 P H F T A E C R F K E 147 GTGTCTTTGA GAATTACTAC GTCCTGTACG CCTCTGCTCT CTACCGCCAG 4650 | var(4620):[T:0.01] | var(4645):[T:0.01] C V F E N Y Y V L Y A S A L Y R Q 164 CGTCGTTCTG GCCGGGCCTG GTACCTCGGC CTGGACAAGG AGGGCCAGGT 4700 | var(4695):[T:0.01] R R S G R A W Y L G L D K E G Q V 181 CATGAAGGGA AACCGAGTTA AGAAGACCAA GGCAGCTGCC CACTTTCTGC 4750 M K G N R V K K T K A A A H F L 197 CCAAGCTCCT GGAGGGTGGG TATAGACTCA AGAAAATGTG GGCCACAGGA 4800 P K L L E 202 GAGGGTATTG ACCTTGATAT GGACATTTAG GGGCAGACAG CTCAGGCTAC 4850 AAGTGATAAG AGGACCCTTT GTGACAGATC AAGCCAGGAA GGCTTTGCCC 4900 TTTGGGGGTT TGGGTGCGGT CCTCCTGTGG GGTTGGGGTT CTTGGAGGGT 4950 GAATGTACGG GAAGGGAGCC CTTTTGGAGC ACTGGTTCTG CCTGGGTCCC 5000 | var(4956):[C:0.37] TCTGTGCCTA ACTCTCCTTC CCTGCTCCTC TCTTTCTCCC CTTCACAGTG 5050 | Exon 5 V 203 GCCATGTACC AGGAGCCTTC TCTCCACAGT GTCCCCGAGG CCTCCCCTTC 5100 A M Y Q E P S L H S V P E A S P S 220 CAGTCCCCCT GCCCCCTGAA ATGTAGTCCC TGGACTGGAG GTTCCCTGCA 5150 S P P A P 225 CTCCCAGTGA GCCAGCCACC ACCACAACCT GTCTCCCAGT CCTGCTCTCA 5200 CCCCTGCTGC CACACACATG CCCTGAGCAG CCAGGTCCCA CTAGGTGCTC 5250 TACCCTGAGG GAGCCTAGGG GCTGACTGTG ACTTCCGAGG CTGCTGAGAC 5300 CCTTAGATCT TTGGGCCTAG GAGGGAGTCA GAGAGGGGGA TGTCTGAAGA 5350 TGGTCCTGGC TGATCACTTC TTTCTTTCCA CACTCACACA ACCCCATGCC 5400 | var(5393):[G:0.02] TTTTCCTGAG ATGGCGCTGG GAGTTCCCAC ATGGACAGCC AGGGCATAAA 5450 CACTTCCCAC CCCGGCTCAG CCAGTTCCTG GAGTCCTGTG CCCCTTTTCA 5500 TTGCCACTGA GCCATTTCTA GATTCACTGG AGCTCAGGAT TCATGTGTCC 5550 TTCTTTCCCT ACTCTACCTT CTACCTTGGT CTGGACACAT TCTGGAACAC 5600 TGGACACCCT CGCCAGGGCC ACTTCTGCAC TAGGGCTCTG TGCTGGAACC 5650 CAGGCATGCT GCCAGCCTTT TCTCTGGATC TGTCAGGCCT CTGTCCTTGA 5700 | var(5696):[A:0.38] CTCAGATGGA CCCCTGGTTT CCAAGTAGAA AGAGGCTAGA TTTGGGCCTT 5750 GTCTAGCTGT TGGCTTTGGC CTGAACCGGA ACCAGTCTCA GATGACCACG 5800 | var(5777):[T:0.38] GGTTTAACCT TCTTATCCCA GAGACACCCA ATTCTAGAGC TTTATGGAGC 5850 CGTACTTCCC CCTGAATCCT AGCTCTAGGA CATAGATCAT GACTCTCAGC 5900 CCTTTTACCC AGGATGGAGC TGGGGCCTGT ATAGCCATAT TATTGTTCTA 5950 AGTAAGTTCT AGCCCCACCC TCCCGCCTTC TTGAGTGATA CCTATTACGG 6000 ATGAGTTCTG GAAAAGACCC AGCTATGATT CATAAAAACA CTTCTGGATG 6050 AATCAAGAAC CATTTCTTGT TTTTCCTAGA TAATTCTCTA AAAATATGAT 6100 TCTTCCATAT AGAATGCTAA GCTTATTTTT ACATGCAGTT TCTAGCTCCT 6150 TCAACCCAGC TGAGGTCGTG CCAGGGAGAC AGAGTCTGGA GAAGGGCAGA 6200 GGAATTTTGG AAGGATCCCT GGCTCATAGT AGGGAAGCTG GGATGGGGGA 6250 GGGGTCAAAA TTATGGCATG ACTGAACCTG CATCTGTGTT GGGTGGACAT 6300 GAATACTTAG CTACCTCAGC AGGAATTCCT TCCAGGTCCC CTTTAAAGCT 6350 GAGGTCCTTA GAGTAATATG TCCTTAATAA AAAGGACAAA TGGATACAGC 6400 CTTGACCCTC CCAGTGAGGA GACCCCAATT CAGCAATAAG TCTCACC