FAU Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

CTGCATGGCC ATCTGTCCAA CAACTGCCTG TCCAATCTTG AACTGGCACC 50 | REPEAT ACCCATGTTA TTCATCCTTG TAGCCAAGGA TAACTGTCTC AAAACAATTA 100 TGTAATACTC ATTTTTCCTT TCCTTTATTT ATTTTTATTA TTTTTTTAGA 150 | REPEAT TAGAGTCTCA CTCTGTCACC TAGGCTGGAG TGCAGTGGTG TGATCTCGGC 200 TCACTGCAAC CTCCGCCTCC CAAGTTCAAG CAAGTCTCCT ACCTCAGCCT 250 CCCAAGTAGC TGGGACTACA GGCACACGCC ATCACACCCG GCTAATTTTT 300 GTATTTTTTG TAGAGACGGG TTTCACCATG TTGGCCAGGC TTGTCTCAAA 350 CTCCTGACTC CAGGTGATCT ACGCGCCTTG GCCTCCCAAA GTGCTGGGAT 400 TACAGGCGTG AGCCACCGTG CCTGGCCCAT TTTTCTGTTA AAAACCTTTG 450 | REPEAT TCTTCTTTTA CCTCCCTGAT AAGCACATAG TCTATACCCA TTCCCGAATA 500 AATATCCTTT TCTTTTAGAG TCTGTTATTT AGGTTGACAT AAGATAGCAC 550 CAGTCTTTGG TTTTCCATGG TGCAGGGTAC AGATGGGATG GAAAGGAGGC 600 TCAGGTACTC TGAATGGTCT GCCTCTCAGG ATTTCTGTGG GATGCAAAAG 650 AGTATATGTA CACTTCTGAA AAGTCAATCA AGCCTTTAGA AACTTAAGGC 700 TTAACTTTCT GTCTCGGTTT TAGAAATAGA TATTATTATA TTGGCAGCGT 750 GGCCTTGTTT GTACCTCCAT GATTGCCTGG CTGGCCTTGC TAACCTAATC 800 ACATCTGTGA CGGGATATAG TGATGTTTAA TCTTATGATT GCCTTAAGAA 850 TTAAGGCAAT CAGACGGGTT CGGCGGCTCA TGCCTGTAAT CCCAGCACTT 900 | REPEAT TGGGAGGCCG AGGCGGGCGG ATCACGAGGT CAGAAGATCC AGTCCATCCT 950 GGCTAACAAG GTGAAACCCC GTCTCTACTA AAAATACAAA AAATTAGCCG 1000 GGCATGGTGG CGGGAGCCTG TAGTCCCAGC TACTCGGGAG GCTGAGGCAG 1050 GAGGATGGCG TGAATCTGGG AGGCGGAGCT TGCAGTGGGC CGAGATCGCG 1100 CCACTGCCCT CCAGCCTGGG CGACAGAGCG AGACTCCGTC TCAAAAAAAA 1150 | var(1115):[G:0.01] AAAAAAAAAG AATTAAGGCA ATCATAATTC CCCACGCACA CTCATATGCT 1200 AGGACCCCGC CCCTTACCTG AAACGTTGTG GCTTATATAG ACACTGCCAG 1250 GCACTGTGTT AAGTGCTCCC AAAGAGCACC CCAGTCTACC ATTTTCCCTC 1300 TCGATTCTAT ATGTACACTC GGGACAAGTT CTCCTGATCG AAAACGGCAA 1350 AACTAAGGCC CCAAGTAGGA ATGCCTTAGT TTTCGGGGTT AACAATGATT 1400 AACACTGAGC CTCACACCCA CGCGATGCCC TCAGCTCCTC GCTCAGCGCT 1450 CTCACCAACA GCCGTAGCCC GCAGCCCCGC TGGACACCGG TTCTCCATCC 1500 CCGCAGCGTA GCCCGGAACA TGGTAGCTGC CATCTTTACC TGCTACGCCA 1550 GCCTTCTGTG CGCGCAACTG TCTGGTCCCG CCCCGTCCTG CGCGAGCTGC 1600 | var(1584):[G:0.01] CTGCCCAGGC AGGTTCGCCG GTGCGAGCGT AAAGGGGCGG AGCTAGGACT 1650 | var(1624):[A:0.02] GCCTTGGGCG GTACAAATAG CAGGGAACCG CGCGGTCGCT CAGCAGTGAC 1700 | Exon 1 | UTR GTGACACGCA GCCCACGGTC TGTACTGACG CGCCCTCGCT TCTTCCTCTT 1750 | var(1734):[T:0.02] TCTCGACTCC ATCTTCGCGG TAGCTGGGAC CGCCGTTCAG GTAAGAATGG 1800 GGCCTTGGCT GGATCCGAAG GGCTTGTAGC AGGTTGGCTG CGGGGTCAGA 1850 AGGCGCGGGG GGAACCGAAG AACGGGGCCT GCTCCGTGGC CCTGCTCCAG 1900 TCCCTATCCG AACTCCTTGG GAGGCCTGGC CTTCCCCACG TGAGCCGCCG 1950 | var(1936):[G:0.49] CGACCACCAT CCCGTCGCGA TCGTTTCTGG ACCGCTTTCC ACTCCCAAAT 2000 CTCCTTTATC CCAGAGCATT TCTTGGCTTC TCTTACAAGC CGTCTTTTCT 2050 TTACTCAGTC GCCAATATGC AGCTCTTTGT CCGCGCCCAG GAGCTACACA 2100 | Exon 2 | UTR M Q L F V R A Q E L H 11 CCTTCGAGGT GACCGGCCAG GAAACGGTCG CCCAGATCAA GGTAAGGCTG 2150 T F E V T G Q E T V A Q I K 25 CTTGGTGCGC CCTGGGTTCC ATTTTCTTGT GCTCTTCACT CTCGCGGCCC 2200 GAGGGAACGC TTACGAGCCT TATCTTTCCC TGTAGGCTCA TGTAGCCTCA 2250 | Exon 3 A H V A S 30 CTGGAGGGCA TTGCCCCGGA AGATCAAGTC GTGCTCCTGG CAGGCGCGCC 2300 L E G I A P E D Q V V L L A G A P 47 CCTGGAGGAT GAGGCCACTC TGGGCCAGTG CGGGGTGGAG GCCCTGACTA 2350 | var(2318):[T:0.01] L E D E A T L G Q C G V E A L T 63 CCCTGGAAGT AGCAGGCCGC ATGCTTGGAG GTGAGTGAGA GAGGAATGTT 2400 | var(2397):[C:0.02] T L E V A G R M L G 73 CTTTGAAGTA CCGGTAAGCG TCTAGTGAGT GTGGGGTGCA TAGTCCTGAC 2450 AGCTGAGTGT CACACCTATG GTAATAGAGT ACTTCTCACT GTCTTCAGTT 2500 CAGAGTGATT CTTCCTGTTT ACATCCCTCA TGTTGAACAC AGACGTCCAT 2550 GGGAGACTGA GCCAGAGTGT AGTTGTATTT CAGTCACATC ACGAGATCCT 2600 AGTCTGGTTA TCAGCTTCCA CACTAAAATT AGGTCAGACC AGGGCCCCCA 2650 AAGTGCTCTA TAAAATTAGA AGCTGGAAGA TCCTGAAATG AAACTTAAGA 2700 TTTCAAGGTC AAATATCTGC AACTTTGTTC TCATTACCTA TTGGGCGCAG 2750 CTTCTCTTTA AAGGCTTGAA TTGAGAAAAG AGGGGTTCTG CTGGGTGGCA 2800 CCTTCTTGCT CTTACCTGCT GGTGCCTTCC TTTCCCACTA CAGGTAAAGT 2850 | Exon 4 G K V 76 CCATGGTTCC CTGGCCCGTG CTGGAAAAGT GAGAGGTCAG ACTCCTAAGG 2900 | var(2896):[C:0.01] H G S L A R A G K V R G Q T P K 92 TGAGTGAGAG TATTAGTGGT CATGGTGTTA GGACTTTTTT TCCTTTCACA 2950 GCTAAACCAA GTCCCTGGGC TCTTACTCGG TTTGCCTTCT CCCTCCCTGG 3000 AGATGAGCCT GAGGGAAGGG ATGCTAGGTG TGGAAGACAG GAACCAGGGC 3050 CTGATTAACC TTCCCTTCTC CAGGTGGCCA AACAGGAGAA GAAGAAGAAG 3100 | Exon 5 | var(3074):[A:0.01] V A K Q E K K K K 101 AAGACAGGTC GGGCTAAGCG GCGGATGCAG TACAACCGGC GCTTTGTCAA 3150 K T G R A K R R M Q Y N R R F V N 118 CGTTGTGCCC ACCTTTGGCA AGAAGAAGGG CCCCAATGCC AACTCTTAAG 3200 | UTR V V P T F G K K K G P N A N S 133 TCTTTTGTAA TTCTGGCTTT CTCTAATAAA AAAGCCACTT AGTTCAGTCA 3250 | var(3242):[T:0.01] TCGCATTGTT TCATCTTTAC TTGCAAGGCC TCAGGGAGAG GTGTGCTTCT 3300 CGGGTTGGTG GTATGTCCCC TAGGAGAACA GTGAGGCAGA AAAGGCAGAA 3350 GCCTTTGGTA TGGGGGGAAG AAATGGTAAA CTACAAGAGA AATTTCCTGT 3400 GAAGAAACAG CTACAGATCC TGGGGGGCTT CAGATGTAAA ATTGGGGTTA 3450 | var(3419):[T:0.01] TTCCCTATCC TAAGTAACTT GATCAGTCCC CCCAGGTCAT TCTTTTTCAT 3500 CTTCTAAACA GAGAAGGTAG CAGGAATCAC TGTGGTGAGA GGTTTGTTAT 3550 GGAGGCAGCA ATAGAAGGGA TGGGTGGGGG AAGAGGTTTG TATAGAAGGT 3600 GAACCTGGCC GTTCCCTGAA CTTGGTACCA GCTGTGGCCT TAGAGTCCAG 3650 GGCAGGAATC TGGTCTGCCT TGGTTTTAGA AGTAAATATT ATGTTGGGAG 3700 CATGGCCTCG TTTGTACCTC TGTGACTGCC TGGCCGGACT TGGTAACCTA 3750 | var(3736):[A:0.01] ATCACATCTG TGATTGGATA TAGTGAGGTT TCAGTGTTCC CAAAAGTTGG 3800 | var(3792):[C:0.49] | var(3799):[C:0.01] | var(3800):[T:0.01] GTTACCTCTG GGGCTGATTC AGGGTTCTCT TCTGGCAACT GAGCCTCCCA 3850 GCACTTCTGA ACCCCACTTA CTCATTCAGC TAAAGTTTCT GGACCTGCCA 3900 | var(3862):[:0.01] GTTCTTGAGA AATAGCATCC AACAGGGTAA AGCCCTTGGG CTGTGGACTT 3950 TGACTGCCTG AGTTTGGACC TTCTTTTTCT TCCTACTCCA TTTACTGGGT 4000 GGCTGGCCTT TGAACTAACT ACTAATTTAA TCTCTGCCAT CTCCAGGGCT 4050 GCTGTGAGGG TTAAAGGATG TAAATCAACA TCTGGCTTAC AGTGAGTGTG 4100 TGAATCTTGG CTATTTTTGT CTCTGTGGTG TTAAAGACAT GGTTTCTGCC 4150 TTCCAGCAGT TTAGAAAGGG GGAGGATGTG GACAGATACA ATAGCATCCC 4200 AGAGAGGGCC TCTTTTTTTG TTTTTCTTTT TTCTTTATTT TATTTTATTG 4250 | REPEAT AGACAGAGTC TCGCACTGTC GCCAGGCTGG AGTGCAGTGG CACAATCCGA 4300 GCTCACTGCA ACCTCAGCCT CCCGGGTTCA CGCCATTCTC CTGCCTCAGC 4350 CCCCTGAGTA GCTGGGACTA CAGGCATGTG CCACCACGCC CAGCTAATTT 4400 TTGTATTTTT AGTAGACATG GGGTTTCCCC ATGTTGGCCA GGATGGTCTC 4450 GATCTCTTGA CCTCGTGATC GCCCACCTCG GCCTCCCAAA GTACTGGGAT 4500 TACAGCCATG AGCCACAGTG CCCGGCCTTT TCTTTTTTGT TTTTGAGACA 4550 | REPEAT AGGTCTCTCT CATCCAGGCT GGAGTGCAGT TGCACAATCA TGGCTCACTG 4600 CAGCCGCCAA CTCCTGGGCC CAGGTGATCC TACTCAGCCT CCAAAGTAGC 4650 TGAGGACTAC AGGCATGCAC CGCCACACCT GGCTAATTTT TTGTACTTTT 4700 TTGTAGAGAC AGGGTTTTGC TATGTTGCCC AGGCTGGTCT TGAACTGGGC 4750 TCAAGTGATC CGCCCACCTT GGCCTCCCAA AGTGCTGAGA TTACAGGTGT 4800 CAGCCGCTGT GCCCAGCCGA GAGGTCCTGT TTAAAT