Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq ED-freq ED-freq Total-freq Allele2 AD-freq AD-freq ED-freq ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000141 00000 ------------ C 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 000161 00000 ------------ - 0.03 0.00 0.21 0.05 0.06 0.08 + 0.97 1.00 0.79 0.95 0.94 0.92 0000 --- --- --- --- 000166 00000 ------------ - 1.00 0.96 0.95 0.98 1.00 0.98 + 0.00 0.04 0.05 0.02 0.00 0.02 0000 --- --- --- --- 000222 00000 ------------ G 0.90 0.96 1.00 0.98 0.98 0.97 A 0.10 0.04 0.00 0.02 0.02 0.03 0000 --- --- --- --- 000443 00000 ------------ G 1.00 0.95 1.00 1.00 1.00 0.99 A 0.00 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000736 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000798 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000811 00000 ------------ - 0.47 0.58 0.79 0.75 0.42 0.61 + 0.53 0.42 0.21 0.25 0.58 0.39 0000 --- --- --- --- 000896 00000 ------------ G 0.96 0.92 1.00 0.93 1.00 0.97 A 0.04 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 001006 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001049 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 001055 00000 ------------ C 0.81 0.80 0.80 0.82 0.50 0.73 A 0.19 0.20 0.20 0.17 0.50 0.27 0000 --- --- --- --- 001073 00000 ------------ C 0.96 1.00 1.00 0.97 1.00 0.99 G 0.04 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 001079 00000 ------------ C 0.83 0.80 0.80 0.82 0.52 0.74 G 0.17 0.20 0.20 0.17 0.48 0.26 0000 --- --- --- --- 001094 00000 ------------ - 0.04 0.08 0.00 0.07 0.00 0.03 + 0.96 0.92 1.00 0.93 1.00 0.97 0000 --- --- --- --- 001367 00000 ------------ G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 001599 00000 ------------ T 0.96 0.92 1.00 0.93 1.00 0.97 C 0.04 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 001606 00000 ------------ T 0.96 0.92 1.00 0.93 1.00 0.97 G 0.04 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 001658 00000 ------------ G 1.00 1.00 0.95 1.00 1.00 0.99 C 0.00 0.00 0.05 0.00 0.00 0.01 0000 --- --- --- --- 001964 00000 ------------ C 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 001972 00000 ------------ G 0.97 0.92 1.00 0.93 1.00 0.97 C 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 002037 00053 NON-SYN C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0012 CCC TCC PRO(P) SER(S) 002232 00000 ------------ G 1.00 0.92 1.00 0.93 1.00 0.97 A 0.00 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 002551 00000 ------------ T 0.82 0.88 1.00 0.93 1.00 0.94 G 0.18 0.12 0.00 0.07 0.00 0.06 0000 --- --- --- --- 002578 00000 ------------ C 0.93 0.96 1.00 0.98 0.96 0.97 A 0.07 0.04 0.00 0.02 0.04 0.03 0000 --- --- --- --- 002808 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002955 00000 ------------ A 0.96 0.92 1.00 0.93 1.00 0.97 G 0.04 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 003493 00000 ------------ A 0.77 0.67 0.79 0.84 0.48 0.71 G 0.23 0.33 0.21 0.16 0.52 0.29 0000 --- --- --- --- 003933 00000 ------------ A 0.93 0.96 1.00 1.00 1.00 0.98 G 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 004031 00000 ------------ C 1.00 1.00 1.00 1.00 0.96 0.99 T 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 004202 00208 SYNON A 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0063 AAA AAG LYS(K) LYS(K) 005030 00000 ------------ - 0.00 0.04 0.00 0.02 0.02 0.02 + 1.00 0.96 1.00 0.98 0.98 0.98 0000 --- --- --- --- 005209 00000 ------------ T 0.96 1.00 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 005605 00000 ------------ C 1.00 0.95 1.00 0.97 0.98 0.98 A 0.00 0.05 0.00 0.03 0.02 0.02 0000 --- --- --- --- 005756 00000 ------------ T 0.90 0.95 1.00 1.00 1.00 0.98 C 0.10 0.05 0.00 0.00 0.00 0.02 0000 --- --- --- --- 005945 00000 ------------ G 0.90 0.95 1.00 1.00 1.00 0.98 T 0.10 0.05 0.00 0.00 0.00 0.02 0000 --- --- --- --- 006081 00000 ------------ - 0.00 0.00 0.00 0.00 0.02 0.01 + 1.00 1.00 1.00 1.00 0.98 0.99 0000 --- --- --- --- 006122 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 006220 00000 ------------ C 0.97 0.91 1.00 0.93 1.00 0.97 T 0.03 0.09 0.00 0.07 0.00 0.03 0000 --- --- --- --- 006357 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 006436 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 006658 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 006891 00000 ------------ C 0.97 0.92 1.00 0.93 1.00 0.97 T 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 006971 00000 ------------ - 0.10 0.00 0.00 0.00 0.00 0.02 + 0.90 1.00 1.00 1.00 1.00 0.98 0000 --- --- --- --- 007166 00000 ------------ T 0.97 0.92 1.00 0.93 1.00 0.97 C 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 007279 00000 ------------ A 0.93 0.96 1.00 1.00 1.00 0.98 T 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 007438 00000 ------------ A 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 007439 00000 ------------ C 0.47 0.58 0.80 0.75 0.42 0.61 T 0.53 0.42 0.20 0.25 0.58 0.39 0000 --- --- --- --- 007668 00000 ------------ G 0.90 0.96 1.00 0.98 0.98 0.97 T 0.10 0.04 0.00 0.02 0.02 0.03 0000 --- --- --- --- 007693 00000 ------------ G 1.00 1.00 1.00 1.00 0.96 0.99 T 0.00 0.00 0.00 0.00 0.04 0.01 0000 --- --- --- --- 007727 00000 ------------ - 0.00 0.00 0.00 0.02 0.00 0.01 + 1.00 1.00 1.00 0.98 1.00 0.99 0000 --- --- --- --- 008523 00000 ------------ C 0.97 1.00 1.00 1.00 0.98 0.99 G 0.03 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 008570 00000 ------------ T 1.00 1.00 0.98 1.00 1.00 0.99 C 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 008580 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 008924 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009022 00000 ------------ G 1.00 1.00 1.00 0.98 0.96 0.98 A 0.00 0.00 0.00 0.02 0.04 0.02 0000 --- --- --- --- 009106 00000 ------------ A 0.97 1.00 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009566 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009613 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 009705 00000 ------------ A 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 009897 00000 ------------ G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 010079 00000 ------------ G 1.00 1.00 0.93 1.00 1.00 0.98 A 0.00 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 010579 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 010635 00000 ------------ - 0.00 0.04 0.00 0.02 0.02 0.02 + 1.00 0.96 1.00 0.98 0.98 0.98 0000 --- --- --- --- 010647 00000 ------------ T 0.40 0.42 0.80 0.75 0.42 0.58 C 0.60 0.58 0.20 0.25 0.58 0.42 0000 --- --- --- --- 010708 00000 ------------ C 0.87 0.95 0.32 0.60 1.00 0.72 T 0.13 0.05 0.68 0.40 0.00 0.28 0000 --- --- --- --- 010798 00000 ------------ A 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 012364 01048 3' UTR A 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 012607 01291 3' UTR A 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 012703 01387 3' UTR C 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 012867 01551 3' UTR G 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 012903 01587 3' UTR A 0.97 0.92 1.00 0.93 1.00 0.97 G 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 012945 01629 3' UTR - 0.00 0.08 0.00 0.00 0.00 0.01 + 1.00 0.92 1.00 1.00 1.00 0.99 0000 --- --- --- --- 013003 01687 3' UTR C 0.93 1.00 1.00 1.00 1.00 0.99 T 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013080 01764 3' UTR A 0.97 0.92 1.00 0.93 1.00 0.97 T 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 013523 00000 ------------ A 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 013551 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013608 00000 ------------ C 0.54 0.50 0.81 0.77 0.44 0.63 T 0.46 0.50 0.19 0.23 0.56 0.37 0000 --- --- --- --- 013648 00000 ------------ C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013763 00000 ------------ T 1.00 1.00 1.00 1.00 0.98 0.99 C 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 013767 00000 ------------ C 0.95 1.00 1.00 1.00 1.00 0.99 G 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 013849 00000 ------------ - 0.75 0.95 0.20 0.25 0.75 0.52 + 0.25 0.05 0.80 0.75 0.25 0.48 0000 --- --- --- --- 014205 00000 ------------ G 0.95 0.92 1.00 0.93 1.00 0.97 A 0.05 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- 014339 00000 ------------ - 0.91 1.00 1.00 1.00 1.00 0.99 + 0.09 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015011 00000 ------------ C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 015037 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015068 00000 ------------ A 0.97 0.92 1.00 0.93 1.00 0.97 T 0.03 0.08 0.00 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000161: AGTACTACAAGCAAGGAATCAAATAGTATGTCTCTCATGTGAACATTT 000166: TAC 000811: GGTGTCTTGCCCACAGCTTGGGGAGCGGCCCCGGGCGC 001094: CC 005030: AAAAT 006081: TTAA 006971: TT 007727: CA 010635: TTAT 012945: TTTCT 013849: T 014339: T