Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 000293 AA 20 7 5 2 34 AG 4 12 10 10 36 GG 2 2 5 9 18 4.351 0.940 0.000 0.107 2.083 000656 AA 26 19 19 24 88 AC 1 0 0 0 1 CC 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 000903 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 24 18 20 23 85 0.010 0.000 0.000 0.000 0.003 000986 CC 2 1 5 10 18 CG 4 10 10 10 34 GG 20 8 5 2 35 4.351 0.903 0.000 0.050 3.054 001511 CC 26 19 19 22 86 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 001517 AA 12 1 0 0 13 AG 10 6 5 8 29 GG 4 12 14 15 45 0.588 0.048 0.436 1.019 4.564 001594 CC 23 19 19 23 84 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 001728 CC 0 4 1 2 7 CG 3 11 10 3 27 GG 24 6 10 18 58 0.093 0.069 0.583 5.624 2.144 001808 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 26 21 22 24 93 0.010 0.000 0.000 0.000 0.003 001866 GG 3 14 13 14 44 GT 10 6 8 7 31 TT 14 1 0 0 15 0.338 0.114 1.163 0.840 4.815 001930 CC 26 21 22 23 92 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 001948 CC 27 20 22 24 93 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 001955 CC 22 21 22 24 89 CT 5 0 0 0 5 TT 0 0 0 0 0 0.281 0.000 0.000 0.000 0.070 002149 AA 27 19 16 24 86 AG 0 0 4 0 4 GG 0 0 0 0 0 0.000 0.000 0.247 0.000 0.046 002297 GG 26 20 20 24 90 GT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 002341 CC 23 11 4 4 42 CT 4 8 8 16 36 TT 0 0 4 4 8 0.173 1.351 0.000 2.667 0.005 002546 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 26 21 22 24 93 0.000 0.012 0.000 0.000 0.003 002611 CC 27 22 21 23 93 CG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 003195 GG 26 21 22 24 93 GT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 003614 CC 0 0 4 4 8 CT 3 7 11 15 36 TT 20 13 6 4 43 0.112 0.900 0.069 2.130 0.014 003781 AA 1 0 4 4 9 AT 3 6 11 14 34 TT 19 14 6 4 43 2.457 0.623 0.069 1.636 0.339 004130 AA 0 0 0 0 0 AG 7 0 0 1 8 GG 17 19 20 22 78 0.700 0.000 0.000 0.011 0.205 004369 CC 23 20 21 24 88 CG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 004432 AA 24 20 21 24 89 AG 0 1 0 0 1 GG 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 004916 CC 0 0 0 2 2 CT 1 3 0 3 7 TT 26 19 17 16 78 0.010 0.118 0.000 4.954 8.947 006161 AA 0 0 0 0 0 AC 0 0 0 1 1 CC 26 18 20 21 85 0.000 0.000 0.000 0.012 0.003 006376 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 27 20 17 21 85 0.000 0.000 0.000 0.012 0.003 006430 GG 0 0 0 0 0 GT 2 0 0 0 2 TT 25 19 18 21 83 0.040 0.000 0.000 0.000 0.012 007213 CC 26 19 21 20 86 CG 0 0 0 2 2 GG 0 0 0 0 0 0.000 0.000 0.000 0.050 0.012 008550 AA 0 0 0 0 0 AG 2 0 0 0 2 GG 24 22 21 24 91 0.042 0.000 0.000 0.000 0.011 008852 CC 0 0 0 0 0 CT 0 0 2 0 2 TT 27 22 20 24 93 0.000 0.000 0.050 0.000 0.011 009023 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 009110 CC 0 0 0 0 0 CT 0 0 0 1 1 TT 27 22 22 23 94 0.000 0.000 0.000 0.011 0.003 009735 GG 26 22 22 24 94 GT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 009859 AA 3 0 1 1 5 AG 10 7 7 9 33 GG 13 14 13 14 54 0.246 0.840 0.002 0.091 0.000 010095 CC 25 21 19 24 89 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 010256 GG 25 21 20 24 90 GT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 010268 CC 25 21 20 24 90 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 010342 -- 0 0 0 1 1 +- 6 7 6 9 28 ++ 20 14 14 14 62 0.442 0.840 0.623 0.091 1.257 010350 -- 0 0 0 1 1 +- 5 7 8 8 28 ++ 20 14 14 14 62 0.309 0.840 1.086 0.011 1.257 010595 AA 0 0 0 0 0 AC 0 1 0 0 1 CC 26 19 22 23 90 0.000 0.013 0.000 0.000 0.003 010782 AA 23 22 22 23 90 AC 3 0 0 0 3 CC 0 0 0 0 0 0.097 0.000 0.000 0.000 0.025 011088 CC 25 22 22 22 91 CG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 011167 -- 2 0 0 0 2 +- 11 0 2 0 13 ++ 13 22 20 22 77 0.024 0.000 0.050 0.000 2.281 011721 AA 7 4 3 11 25 AC 12 12 12 11 47 CC 8 6 7 2 23 0.326 0.220 0.362 0.107 0.010 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 010342: C 010350: C 011167: tttg