CYR61 Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

CCCTCCTCTC CATTCTCTCT CTAGTTCAAC CAGTACTGTC CCTGCACCCC 50 TCCTCCCCCC TCCCGCCCCC CGTCACTTCA TTAAGAAGGA AACAATAATG 100 AAATGATAAG GCAGGAAAAA CAGTGTTTTG TAAATAATAA TTGATGTATT 150 AACCTGTGTA CGTGTTGGGC CCACACTTTC CTCACTGTAT TTGCATAACA 200 | var(175):[G:0.31] CCTGACAATC CATTGTCTTG AAAAGTCTCC CACCCCTAAC CCTCTAACAG 250 AGCTTTAGAG ATCCCACTCC CTCTAGCAAA TGCTGCTTCC ATTTATGAAA 300 GGGCACTTTG GAATGAATGA AACTGAACTC CTTCCTGCAA GAATTCTCTT 350 CACTGGAGTG TGTTTTCATC CTGACAGATT CTCATTGTGC TTATCAGGAA 400 AGTCAGCATT AGCACTAAGG GCCTTTTCAA GCAAGACTGC TAAATTATGA 450 AGTCTGAATA GCCTTAAACA TTAAAAAGGA TAAGTAGTTA TCCTAGAGCA 500 TATGAGTCTT ACATGATAAT TTTTATTAAA ATTATGCAAA AAGTTTTTGA 550 AACTTGCAGG GAAAGTTTAT CAATCACACT AATGGTATTG GTGATGTTCA 600 AGTAAATTGT CTTGTGGTGG GGTCTTCTAC TGAGTGTGTT GCAAGTAGAA 650 | var(628):[C:0.31] CGGGATCTTA AAATCTGCTG ACATTTTTAC TGCAAAATAT TACATCCTAA 700 ATCTCTTTTC TGTACTTGGA GAGAAGGGCA TTGCAATTCA TTTAAAATGG 750 GAGGCTTCCA GTGGTCCCTA GGAAAGGAGT TAAAAACCCC ACAAAATGTC 800 CAGCTTGAAG GAGTCTGCTT TTCCCAGAGA TTCATAGGGC ACAATGGTCC 850 TGGAATCTGG TTTGGCCTTG CGGTCTTTGC AGGTGATGAT TTCAGGCCAC 900 TCCACGGTGG TCTCCTGCAC TTCTGGCTGG CTGCTTGGTT AGCATAGCCT 950 | var(909):[A:0.01] CCTGCCCGCG GAGGGAGGCG GGAAGGGCTT ACCCCGTCTC CTGCATCCGT 1000 | var(951):[T:0.01] GAGGAAGTAT AAGTCAGCCT CCCGGAGAAC TCCCCGCGTT CGTTTCCTCT 1050 | var(1021):[T:0.01] CGGACTTCCA ACCCAGGCAG TGGGCTGGAA CTAAAGTGGG AACCTCCAAA 1100 AACAAACAAG TACAACATAC CCAAAAGAGG GAAGGGCTGG AGGAGTGGGG 1150 GAGACCTCTG CCTGGGAATT TGCCAGACGA TGGGCAAGTT TCCCCCCGCC 1200 | var(1166):[A:0.32] CCACCCCCCC CCCGCCTTTT CATTCATAAA TGCCACTGTG GGTATTAATT 1250 TGCAATTCAC TGAACTTTGC TAATAAACAT CATGCCAAAG CTTTGGGACT 1300 TGTTCCGAAC ACGCCTCTTT GAAGTCCACA AATATTCCTG ACTCAGAGAC 1350 ACACTCCTCT TCCCCGTTCT ACTCTTTCAA CAGATAACTT GCCTCTCACC 1400 TTCGCTGTAA AAAAGCAAAC AGCTCACTGC CTTCCCGGGT GAGGGCTTCA 1450 | var(1412):[C:0.29] GTGGCTGCCC GGTCAACTCG CATCACCAAA CAAAACGACT TTTGTTCCTC 1500 | var(1486):[T:0.01] | var(1497):[T:0.01] CCTCTCAGGT CCTCCCACCC ACCCAGTCCA GGCAAAGTTC TGAACTGGCC 1550 | var(1514):[T:0.01] CCCCTCGCCC CTCACGACCC TCCAACTACC ATCACCACCA TCACGCCCCA 1600 AAGAACCCTT CCCAACATAA GTCGTAATTT AAGGTGGAAA AAACGAACTG 1650 | var(1611):[G:0.01] TTTTCTTGAC GGGTCTGGGA CACACACACA CACACACACA CACACACACA 1700 CACCCCCCGA ACTGTTTTCT TGACGGGTCT GGGAGACAGA CACACACACA 1750 GACACACACA CACACACACA CACACACACA CACACACACA CACACACACA 1800 CACACAAAGG TGCAATGGAG CCAGGGGAGG CGCTTGGCAG CAGCCCGCGC 1850 CAACCAGCAT TCCTGAGATG TTTGAGAATT CTGGAACGCG CAGACAGAGC 1900 CGACGTCACT GCAACACGCG GCGCCTCCGC CGGCCCGTAT AAAAGGCGGG 1950 CTCCGGGGCG CCTGGGCAGA CCGCGAGCGA GAGCGCCCCC GAGCAGCGCC 2000 | Exon 1 | UTR CGCGCCCTCC GCGCCTTCTC CGCCGGGACC TCGAGCGAAA GACGCCCGCC 2050 CGCCGCCCAG CCCTCGCCTC CCTGCCCACC GGGCCCACCG CGCCGCCACC 2100 CCGACCCCGC TGCGCACGGC CTGTCCGCTG CACACCAGCT TGTTGGCGTC 2150 TTCGTCGCCG CGCTCGCCCC GGGCTACTCC TGCGCGCCAC AATGAGCTCC 2200 M S S 3 CGCATCGCCA GGGCGCTCGC CTTAGTCGTC ACCCTTCTCC ACTTGACCAG 2250 R I A R A L A L V V T L L H L T R 20 GCTGGTGAGT TGGACTCTCC TTTTGCCACC TATTCCCCGT CCGCTCTCCA 2300 L 21 GCCCCTTCCC CTGGTCCCAG ATTGCCCACG GCAGGAAAAG TTAAAAAGTT 2350 CGCGATCGTT TGCGGGTAGC CGTTTCTTTA AGCACTCTCC CCCTCCCCCC 2400 GAAGACGTGT CGGGACCTCT TGGTGGGAGC AGCCTTCCGA GGTGGCCGGG 2450 | var(2448):[A:0.48] CTGGACGAGA TCAGAGGCTC CCCGTCGATA GGGTCGGAGA CCCCCGTCCC 2500 TCACTGCGGC AGCCGCGGCG CCCCTCCTGC GCACCGCGCC GAGTCTCACG 2550 CGTATCTTCT CCCCCTTCCA GGCGCTCTCC ACCTGCCCCG CTGCCTGCCA 2600 | Exon 2 A L S T C P A A C H 31 CTGCCCCCTG GAGGCGCCCA AGTGCGCGCC GGGAGTCGGG CTGGTCCGGG 2650 C P L E A P K C A P G V G L V R 47 ACGGCTGCGG CTGCTGTAAG GTCTGCGCCA AGCAGCTCAA CGAGGACTGC 2700 D G C G C C K V C A K Q L N E D C 64 AGCAAAACGC AGCCCTGCGA CCACACCAAG GGGCTGGAAT GCAACTTCGG 2750 S K T Q P C D H T K G L E C N F G 81 CGCCAGCTCC ACCGCTCTGA AGGGGATCTG CAGAGGTAAG ATGCTTGTGG 2800 A S S T A L K G I C R 92 TTTGGCCCCT TTAAAAAAAA TACTAGTCCC CATAGTCCAG AAGTTTAGTA 2850 | var(2835):[C:0.15] ATTCTGAGAC CATGTATGGT GATGCTTTGT TGTTGGTAGC TTGGCAGAAA 2900 GGCACATGAT TTCAGCAGTC TGGAATGCAA TTCAGTGTGT CTGGGCCCAA 2950 CGAAAGCGCA TACGGAAAAG TGATTCCTGA CTAACTTATT GTTCTGGTCT 3000 GGAGTCTCCG GGGAATTGTA GGGAACTTTA CCATAAATTG AATTTAACAG 3050 CAGAAAATAT GTATGAGTTT CAGGCGGTGG TTTGGAATCT TAACTTTATC 3100 CCCTTCTACC TTTCTCTTTT GGTGATCTTT GCAGCTCAGT CAGAGGGCAG 3150 | var(3116):[G:0.03] | Exon 3 A Q S E G R 98 ACCCTGTGAA TATAACTCCA GAATCTACCA AAACGGGGAA AGTTTCCAGC 3200 P C E Y N S R I Y Q N G E S F Q 114 CCAACTGTAA ACATCAGTGC ACATGTATTG ATGGCGCCGT GGGCTGCATT 3250 P N C K H Q C T C I D G A V G C I 131 CCTCTGTGTC CCCAAGAACT ATCTCTCCCC AACTTGGGCT GTCCCAACCC 3300 P L C P Q E L S L P N L G C P N P 148 TCGGCTGGTC AAAGTTACCG GGCAGTGCTG CGAGGAGTGG GTCTGTGACG 3350 R L V K V T G Q C C E E W V C D 164 AGGATAGTAT CAAGGACCCC ATGGAGGACC AGGACGGCCT CCTTGGCAAG 3400 E D S I K D P M E D Q D G L L G K 181 GAGCTGGGAT TCGATGCCTC CGAGGTGGAG TTGACGAGAA ACAATGAATT 3450 | var(3433):[A:0.02] E L G F D A S E V E L T R N N E L 198 GATTGCAGTT GGAAAAGGCA GCTCACTGAA GCGGCTCCCT GGTAAGTGGA 3500 I A V G K G S S L K R L P 211 GACTGAGCAC TTCAGACACT GTACTGAGAT GCATTTCTGG TCTAAATCTT 3550 TGTAGAAATG AGTGCTTGAG CCTGTTTGTG TCGGTATGCC TCTGAGAAGT 3600 CTTCCCTCTT ATATGTCTCT AGTTTTTGGA ATGGAGCCTC GCATCCTATA 3650 | Exon 4 V F G M E P R I L Y 221 CAACCCTTTA CAAGGCCAGA AATGTATTGT TCAAACAACT TCATGGTCCC 3700 N P L Q G Q K C I V Q T T S W S 237 AGTGCTCAAA GACCTGTGGA ACTGGTATCT CCACACGAGT TACCAATGAC 3750 Q C S K T C G T G I S T R V T N D 254 AACCCTGAGT GCCGCCTTGT GAAAGAAACC CGGATTTGTG AGGTGCGGCC 3800 N P E C R L V K E T R I C E V R P 271 TTGTGGACAG CCAGTGTACA GCAGCCTGAA AGTAAGTTCC TTCAGGGACG 3850 C G Q P V Y S S L K 281 TGTAGACTGT TGCCTGGCAG GTGGGTGGGA TGTGAACATC TTTTTGAAGA 3900 AAGAGAAATA TCACCCCTAA CTTTCCTTCT CTCCTTTCTC TTACAGAAGG 3950 | Exon 5 K 282 GCAAGAAATG CAGCAAGACC AAGAAATCCC CCGAACCAGT CAGGTTTACT 4000 G K K C S K T K K S P E P V R F T 299 TACGCTGGAT GTTTGAGTGT GAAGAAATAC CGGCCCAAGT ACTGCGGTTC 4050 Y A G C L S V K K Y R P K Y C G S 316 CTGCGTGGAC GGCCGATGCT GCACGCCCCA GCTGACCAGG ACTGTGAAGA 4100 C V D G R C C T P Q L T R T V K 332 TGCGGTTCCG CTGCGAAGAT GGGGAGACAT TTTCCAAGAA CGTCATGATG 4150 | var(4103):[T:0.01] M R F R C E D G E T F S K N V M M 349 ATCCAGTCCT GCAAATGCAA CTACAACTGC CCGCATGCCA ATGAAGCAGC 4200 | var(4183):[A:0.01] I Q S C K C N Y N C P H A N E A A 366 GTTTCCCTTC TACAGGCTGT TCAATGACAT TCACAAATTT AGGGACTAAA 4250 | UTR F P F Y R L F N D I H K F R D 381 TGCTACCTGG GTTTCCAGGG CACACCTAGA CAAACAAGGG AGAAGAGTGT 4300 CAGAATCAGA ATCATGGAGA AAATGGGCGG GGGTGGTGTG GGTGATGGGA 4350 CTCATTGTAG AAAGGAAGCC TTGCTCATTC TTGAGGAGCA TTAAGGTATT 4400 TCGAAACTGC CAAGGGTGCT GGTGCGGATG GACACTAATG CAGCCACGAT 4450 TGGAGAATAC TTTGCTTCAT AGTATTGGAG CACATGTTAC TGCTTCATTT 4500 TGGAGCTTGT GGAGTTGATG ACTTTCTGTT TTCTGTTTGT AAATTATTTG 4550 CTAAGCATAT TTTCTCTAGG CTTTTTTCCT TTTGGGGTTC TACAGTCGTA 4600 AAAGAGATAA TAAGATTAGT TGGACAGTTT AAAGCTTTTA TTCGTCCTTT 4650 GACAAAAGTA AATGGGAGGG CATTCCATCC CTTCCTGAAG GGGGACACTC 4700 CATGAGTGTC TGTGAGAGGC AGCTATCTGC ACTCTAAACT GCAAACAGAA 4750 ATCAGGTGTT TTAAGACTGA ATGTTTTATT TATCAAAATG TAGCTTTTGG 4800 GGAGGGAGGG GAAATGTAAT ACTGGAATAA TTTGTAAATG ATTTTAATTT 4850 TATATTCAGT GAAAAGATTT TATTTATGGA ATTAACCATT TAATAAAGAA 4900 ATATTTACCT AATATCTGAG TGTATGCCAT TCGGTATTTT TAGAGGTGCT 4950 CCAAAGTCAT TAGGAACAAC CTAGCTCACG TACTCAATTA TTCAAACAGG 5000 ACTTATTGGG ATACAGCAGT GAATTAAGCT ATTAAAATAA GATAATGATT 5050 GCTTTTATAC CTTCAGTAGA GAAAAGTCTT TGCATATAAA GTAATGTTTA 5100 AAAAACATGT ATTGAACACG ACATTGTATG AAGCACAATA AAGATTCTGA 5150 AGCTAAATTT GTGATTTAAG AAAACAGCGC TTCATGTTCA TCAGAATATA 5200 AAGCCTAAGG GTCTCCATCA CTCTGTGAGA TGGCTATAAT AATTTATTAT 5250 TTTAATCACC AGGTTAGTGG GCATGCCACT TTAGTAGAGT AGAGAAACCC 5300 TTTAATGAAA AGGGGTAGTC CATAACTCAG GCTGCCCACA TCCAGATCCA 5350 | var(5303):[C:0.01] | var(5347):[C:0.49] TGGGCAAGAT TGAATATAAT TAATGTATTC TAAAGACTTG CTTGTTTATA 5400 ACTTTATATT TTCCCAATAC CGTTCCTAAA AATTAGAACT ACTTAGAAAT 5450 TTACCCTTGG CTGTTATGAG GAAAAATCTG AGTCTATAGG AGTCAGTTTG 5500 TTTTCACTAA ATGAGCTTGA AGCATGACTT GTGTTAATCC TAATAAGCCG 5550 GTGATTAGGT AAACATGCTG TTAAATGCAA AGGAATGCAA GGAATTTCAA 5600 GTACTTTTCC AATAGCGTGA GGGCCAAGCT ACCCCATCCC CCTTTCCTTT 5650 | var(5601):[C:0.19] TTATAATATA CGTTATATTG ATGGGGGAGG GAGCAGTTAT ATAGAGTTGG 5700 CTATTCAGAA GGTCAAAGGT CCAGAGCATT CCTAAAAGAA AGGGACCCAA 5750 ATCATAGGTC TAGGAGAGGT TGAGAAGGCT GTGTCAATGT TTGTGAAAAT 5800 GTCAGTAGTC TGTTTCAGAA GCATCTTCAT CTTTAGAAAG CGCTGACAAT 5850 AAACCTTTTA TAGGGAGAAG TTTTCCTTTC ATCATCACTG TTGGCTCCTG 5900 TTCAAATCCA TAGTGAAATA TTTCAGTCCG CACTTAGTTA AGAGAGTACT 5950 | var(5929):[T:0.02] TGAGTTTTTA GGCAGAAGAG AAAGTGCTTT TAAAAGGAAT GGAGGAGGAC 6000 AGCTCCTGGG ATCCTGAAGG GATTTTTCCA AGTAGATTAA ATAAGATCCA 6050 TACTTTAATG AAGACCCACA GAAAAATACT GCCTAAGAAA TGGTTTTAAA 6100 | var(6094):[G:0.02] GCCTTATGGA AATGCATAGA GGTTAATATA AATGCACTAG TAAAATCTAT 6150 | var(6112):[C:0.01] | var(6119):[A:0.03] GGCCAAAAGC CTTCACTTCT GATTTTGACT TGCCTGAAAT ATTACAGCTT 6200 GTGCCTTCTG AATAGTCAGG TTTCTTGCCT GAGACATTCA AATGTTAAGG 6250 | var(6224):[T:0.26] TATTTGAGAA TTTAAACATC AGCTGGCCCA GTCGTGGATG CAGTTAAACT 6300 TGTCAGTGCA ATGTAACGTG TGAAACATAA TAAAGGTGTG AGGCTTTTGT 6350 GGTGCAATCT TGTTGAACAG ACATCTAAAT CCATAGGCAA GATTTACACA 6400 TTCCCAAGCA TCAACCCTGA AGTATTGCTC TCCAACACTG GAGTCCAACA 6450 | var(6418):[C:0.01] AATTGCTTCT TATGCAGAGA TCAAGGAGCA ATATTTTATA GATCCTTTCA 6500 | var(6489):[C:0.49] GTGTGCAGGG AAGTAGTATT TGTCCAAATA AGCTCAAATG TGAAACAGAA 6550 | var(6516):[:0.02] CCTAGTATGG GAAAACACTG AATCTTTGGG TTATTAATTT CATCCTAGTA 6600 | var(6580):[A:0.02] AATATAATGA GGGTGATTGA AAGTGCCAAT TCCATTTACA ATAAGTGTGT 6650 TCAATTAATA AAGAAGATGA ATACAAGCAA ATTATGTCTT TTGTTTAGCT 6700 ATAGAAAAAC CTGAAGAAAT TAAAAGTAGT GGAGAATAAA ATTATGATAT 6750 TTAGAACACG TAAGTTTTAC CTACATCCAG AATGGAGCTC TGCCCACTTT 6800 | var(6771):[T:0.32] AAATATTGAG AAAACAAACC AAAAATTATG CATCTGCATA TATGAAATAG 6850 AAGTTACATA TAGAAATATT CATTATAATA TATATGTACC TTCCCATGCA 6900 CAGT