CP Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
G
T
G
T
G
C
T
A
T
G
C
A
T
A
C
A
T
T
C
T
G
G
A
A
C
C
C
T
C
A
G
C
A
A
C
T
A
T
T
T
G
A
A
C
A
G
G
T
T
T
50 |
NOT SCANNED
G
T
T
T
G
T
T
G
G
A
T
G
G
T
T
G
G
T
T
G
G
T
A
C
A
A
T
T
T
G
C
T
G
A
A
A
C
A
A
G
T
G
A
C
T
C
T
G
G
G
100
C
A
T
G
G
T
T
A
C
G
G
T
G
C
T
C
T
G
A
T
C
A
A
C
A
T
C
T
T
T
C
C
A
T
G
C
A
C
A
A
G
A
T
T
G
G
G
G
C
T
150
G
A
G
T
T
T
G
A
G
C
A
C
T
G
A
G
T
G
A
A
A
A
A
T
G
A
A
A
A
G
C
A
A
A
T
G
G
C
T
G
A
G
A
C
A
G
T
T
G
C
200
T
G
G
T
T
C
A
C
A
T
C
G
T
G
G
C
T
T
C
A
T
G
C
C
A
A
T
T
A
G
A
A
A
A
A
G
A
A
C
T
G
T
C
C
C
C
C
T
T
C
250
T
C
C
A
T
G
C
C
C
T
G
G
G
G
A
G
G
A
T
A
A
A
C
G
G
C
T
G
A
A
A
A
A
T
G
C
C
C
C
C
C
G
T
C
T
G
T
G
T
G
300
G
A
C
C
A
T
T
A
G
G
G
G
A
A
A
A
G
C
A
G
C
T
T
C
T
T
G
C
A
A
G
G
C
A
C
A
G
G
G
T
A
T
G
G
C
C
G
G
T
G
350
G
C
A
T
C
T
G
A
G
C
A
A
G
A
T
T
T
T
A
G
T
C
C
T
T
C
G
T
C
A GTCCTCTCAG TGGACATGAC
400
GGCACAATTG TTCAAGGCAG TCCTAGAAGG AGGCCTTGGG GCATCCTGGG
450
CAACATGATT CAGTTTTCTG TACCAAGCCA TTTAGTTAAG ATTATTACCA
500
GCTGGTGAGA GAAGCTCCTC CA
C
TGTCTGC CTTAACATAG GTCATTTCAA
550 |
var(523):[T:0.2500]
TTAACCTGAG ATTTTCAGAT GAGGAAACTG AAGCTGGGCT GAAGTATCTT
600
ACTTGAGGTC ATTTGGTAGC ATCAGAT
T
T
T
T
C
C
C
T
A
G
C
A
C
T
C
C
T
T
A
T
T
C
T
650 |
REPEAT
C
C
T
T
C
T
C
T
G
C
T
T
T
A
T
T
T
T
T
C
T
C
C
A
T
A
G
C
A
T
T
C
A
C
C
A
C
T
A
A
T
A
T
T
G
T
G
T
A
T
700
T
T
C
A
T
T
T
T
T
C
A
T
T
T
T
T
A
T
A
T
T
T
T
C
A
G
T
T
T
C
C
C
C
A
A
G
T
A
G
A
A
T
G
T
A
A
G
T
T
G
750
C
A
T
G
A
T
G
G
T
A
G
G
T
G
T
T
T
T
G
T
T
C
T
C
T
G
C
G
G
T
A
T
T
C
C
C
A
G
T
G
A
G
T
A
G
A
A
C
A
G
800 |
var(777):[T:0.0211]
|
var(779):[T:0.0105]
|
var(780):[C:0.0368]
A
A
C
T
T
G
G
C
A
C
A
G
A
C
T
G
C
T
G
T
A
T
T
C
C
C
A
G
T
G
A
G
T
A
G
A
A
C
A
G
A
A
C
T
T
G
G
C
T
C
850 |
REPEAT
|
var(818):[C:0.0053]
A
T
T
C
A
A
T
A
A
T
A
T
T
T
C
C
T
A
A
A
T
G
A
A
G
G
A
A
T
T GTTCAAATAT CGCATGCTTT
900
CTTCTATACC AATCTATTTC AACAAGTGGC CTTCAGCAAA TACACAACGT
950
TTTGAGGTA
T
TTGAGAGAAA AAAAATTATA CTAACACAAA GTGTCAACTG
1000 |
var(960):[C:0.0055]
TTATCAGGAT TTTCTTCAGC TAAAAAAAAA AGCCATTTCA TACTTTTAGA
1050
CATATACTTC CTGACTAAAA ACAGGGTTTT AAGAAAAAGT CTTCCACCTT
1100
AAAATTCATA TCCACTTCAA AGAGA
A
AAAT TTCAGTCTAA TGATAAACTG
1150 |
var(1126):[G:0.2316]
GGGTACTTTC TATTTACTAA GACTAATCTT TGCCTCTGAA GACAGGTTTA
1200
GTTATGGTTT GTTTATTTGA TGATTAAAAC AAAGTTATTA GCCCCTGTTA
1250
GGCTCTGCTA GTTATTTGCA TATAGCAATA CAGAATGATC TGGTAAAGTT
1300
TTTATGCAGA TTTGGTCCAA GCTCATAAAA CAGATAAATT CTTCCAAATT
1350
AAATTCTTAT TTTTGTTTAC TTAAATTTGG CATGCTAGAT ATCATGTTTC
1400
ATATCATAAA GCTGCAATTA ATCATTTGTT AGACTTTTAG AAAT
A
G
T
C
A
T
1450 |
REPEAT
G
C
A
C
C
A
C
A
T
A
A
T
A
A
T
G
T
T
T
G
A
G
T
A
A
A
T
G
A
C
A
A
A
C
T
G
C
A
T
A
T
G
T
G
A
T
G
G
T
G
1500
G
T
C
C
C
A
T
A
A
G
A
T
T
A
T
A
A
T
A
A
C
A
T
A
T
T
T
T
T
A
C
T
G
T
A
C
A
T
T
T
T
C
T
A
T
G
T
T
T
G
1550
C
A
T
A
T
G
T
A
T
A
G
A
T
A
C
A
G
A
A
A
T
A
T
C
A
T
T
G
T
G
T
T
A
C
A
A
T
T
G
T
C
T
A
T
A
G
C
A
T
T
1600
C
A
G
C
A
T
A
G
T
T
A
T
A
G
A
C
T
G
T
A
C
A
G
G
T
T
T
G
T
A
G
C
C
T
A
G
G
A
G
C
A
A
T
A
G
G
T
A
T
A
1650
C
C
A
T
A
T
A
G
C
C
T
A
C
C
T
A
G
A
T
G
T
A
T
A
G
T
A
G
G
C
T
A
T
A
T
C
A
T
A
T
A
A
G
T
C
T
G
T
G
T
1700 |
var(1652):[G:0.0053]
|
var(1656):[C:0.0579]
A
A
G
T
A
C
A
C
T
C
T
G
T
G
A
T
A
G
T
C
A
C
A
C
A
A
T
G
A
C
A
A
A
A
T
A
G
C
C
T
A
A
C
A
A
T
G
C
A
T
1750
T
T
C
T
C
A
G
A
A
C
G
T
A
T
C
C
C
T
G
T
C
A
T
T
A
A
G
A
A
C
G
A
C
TGTAGTA AAAAGCTAC
A
1800 |
var(1761):[A:0.0053]
|
var(1780):[T:0.0421]
|
var(1800):[C:0.0211]
TGTTTTGATT CATTTTACAT AATTCTTATC CTG
A
T
T
T
A
C
T
A
A
A
A
G
T
G
C
A
C
1850 |
REPEAT
T
G
T
T
T
G
C
A
G
G
A
C
A
C
T
G
T
G
C
T
G
T
G
A
C
A
T
A
T
T
G
T
C
A
G
A
G
G
A
A
C
A
A
A
G
G
G
A
G
C
1900 |
var(1853):[:0.1737]
|
var(1865):[C:0.0579]
|
var(1869):[T:0.0211]
A
T
T
T
A
G
A
C
A
C
G
T
T
C
T
C
T
G
C
C
C
T
C
C
T
G
G
A
A
T
T
T
A
C
A
C
A
A
T
G
A
A
T
G
G
A
A
A
A
A
1950 |
var(1937):[G:0.2316]
G
G
C
ACAGAGT TATGCACA
C
C
C
T
A
A
T
G
C
C
T
C
C
A
A
C
A
A
T
A
A
C
T
G
T
T
G
A
C
T
T
T
2000 | Exon 1 |
UTR
T
T
A
T
T
T
T
C
A
G
T
C
A
G
A
G
A
A
G
C
C
T
G
G
C
A
A
C
C
A
A
G
A
A
C
T
G
T
T
T
T
T
T
T
G
G
T
G
G
T
2050
T
T
A
C
G
A
G
A
A
C
T
T
A
A
C
T
G
A
A
T
T
G
G
A
A
A
A
T
A
T
T
T
G
C
T
T
T
A
A
T
G
A
A
A
C
A
A
T
T
T
2100
A
C
T
C
T
T
G
T
G
C
A
A
C
A
C
T
A
A
A
T
T
G
T
G
T
C
A
A
T
C
A
A
G
C
A
A
A
T
A
A
G
G
A
A
G
A
A
A
G
T
2150
C
T
T
A
T
T
T
A
T
A
A
A
A
T
T
G
C
C
T
G
C
T
C
C
T
G
A
T
T
T
T
A
C
T
T
C
A
T
T
T
C
T
T
C
T
C
A
G
G
C
2200
T
C
C
A
A
G
A
A
G
G
G
G
A
A
A
A
A
A
A
T
G
A
A
G
A
T
T
T
T
G
A
T
A
C
T
T
G
G
T
A
T
T
T
T
T
C
T
G
T
T
2250
M K I L I L G I F L F 11
T
T
T
A
T
G
T
A
G
T
A
C
C
C
C
A
G
C
C
T
G
G
G
C
G
A
A
A
G
A
A
A
A
G
C
A
T
T
A
T
T
A
C
A
T
T
G
G
A
A
2300
L C S T P A W A K E K H Y Y I G 27
T
T
A
T
T
G
A
A
A
C
G
A
C
T
T
G
G
G
A
T
T
A
T
G
C
C
T
C
T
G
A
C
C
A
T
G
G
G
G
A
A
A
A
G
A
A
A
C
T
T
2350
I I E T T W D Y A S D H G E K K L 44
A
T
T
T
C
T
G
T
T
G
A
C
A
C
GTAAGT CACTATTTTT ATTGTTTATA GACCAAAATT
2400
I S V D T 49
TTAA
G
TTATT TTTAAAGGAT AGAGCCAATA AGATGAAATA TTTTTAAAAT
2450 |
var(2405):[A:0.1798]
TTCTTATATA CAGAAACTGC AAAATGTGGG CTTGAAACCC AAGACACTTG
2500
AATCAATCTC CTTTATATTC CTGTATATTT TTTATTTGGT GGACTACCCT
2550
GCTTCTTTCC TGTTGTTCCT GGGGATCTGT GTTCACATCT TACTACCTCC
2600
CATGGTCGTA ACTGCATCTC
C
GATTAGGAA TCTGTCTTTT TATGTGTTTA
2650 |
var(2621):[T:0.0211]
TGCAGAAGTT
C
TTTCATTTA AACAATTACT GTATACAATG TTATGTTTAT
2700 |
var(2661):[A:0.0263]
TGCACCATTT AATGGTTATT CATGATAGGC ATAAAATTTT TTTATATCTT
2750
TCAAAACATC ACTTATAGAA ATAAAATACA ATTTTAGCAA ATAAGATCCT
2800
GCCTGATATT TATTGAGAGA CTCCAGACAG TT
A
A
G
T
A
G
G
T
T
A
A
T
C
T
T
T
C
A
2850 |
REPEAT
|
var(2848):[C:0.4355]
C
A
G
C
T
T
C
A
G
G
G
T
C
C
T
A
A
T
T
T
G
T
A
A
A
A
T
G
A
G
G
A
T
A
A
T
A
A
G
C
A
T
A
G
C
T
C
A
T
A
2900 |
var(2853):[A:0.0054]
G
G
G
T
T
A
T
T
T
A
A
A
G
A
G
C
G
G
G
T
G
C
A
T
G
T
A
A
A
G
C
T
C
T
T
A
G
T
A
C
A
A
T
G
C
T
T
G
G
C
2950
A
C
A
T
A
T
G
T
G
C
A
T
A
A
A
A
A
A
A
A
T
G
T
C
A
G
G
T
A
C
T
T
A
T
T
AGGAT GGTCCTCAAA
3000 |
var(2963):[:0.9731]
AAGCTCCATG TAACTTAAAT GTCTTCATTT TTCAGTTGGA AAATCCCCTT
3050
ATTGAAAGCA ATATTCACTA CACAGTAAAA CAAAAAGTTT AGTTCTCCTT
3100
GAAGTTTTTT GTACAGAAGT
T
TATCTATAC TGAGGTCTTC ACTTTTAATG
3150 |
var(3121):[G:0.1737]
ATGTTAATTA AACATTAACC ACCAAATGGG AACTTGGAAT TCAAAATCAA
3200
TATTCACTAC ATTAAAATGT ATTTCAGTGG TAATAAAACA CAAACAAGCC
3250
CAATGACCAT CAGCTGCCAA GATTATATCT TTAAAAAACA GCTAAATAAG
3300
GATG
C
C
G
AAG TTTGTAATTA TTGAATCTTA TTGATGAGTA TATACTATTT
3350 |
var(3305):[T:0.0211]
|
var(3307):[A:0.0053]
TCTTTAACAT TATGTAAAGT TGAAATTTTT CACCATAAAA ATAAATACAT
3400
AACAGATACT AATATCCA
A
T TATTATATTA TGAATTTAAT AATATACAAT
3450 |
var(3419):[G:0.1737]
AA
A
GAAAGTT TCTGACCTGA AGATAAGTGG TTGTAAATAA AACTAATACA
3500 |
var(3453):[G:0.1702]
TCTTGTAATT ATTTCTTTTT TAACCTGGTT TTAAGGTGGT ATTATCTTCT
3550
AAGGAATATG ACATATTTTT ACAGCTTCAC CAGAAACATT ATTTTGCATG
3600
GATTCAGTAT TTTCTTGATT AAATATAATA TAAATTATAT GTGGTTTTTA
3650
TTTCCAAGGA AAAAGTCAGA CACATTAAAA AAATAAAAAT ACTATCCTTC
3700
TCTATGCCCC CACTCACCAC CACTCTGCCA TTGTTCGTGA TCAAAAATCA
3750
AATCAGCTTT ATCAGGCATA AACTAAGTGC AAGACATTGC CCTGAATATG
3800
CTTCAAAAAA AAATCTTTAA TTCTAAAAAT CAGGGAGTAG AAGAGTGAAG
3850
GAGTTTGTTT AGAATTTGGT GAATGGGGGC GGAGGAAATT CCTTTGTTTT
3900
TAATTACT
C
C TGTGGCCTGT CTGTGCCAGG GAAGCTACCC AATGAGTATA
3950 |
var(3909):[T:0.1702]
AGCCTGTTTA CCCCATTGTG AC
T
A
T
A
T
T
A
G
T
C
T
C
T
T
C
T
T
A
T
G
C
T
G
C
T
A
A
T
4000 |
REPEAT
A
G
A
G
A
C
A
T
A
C
T
C
A
A
G
A
C
T
G
A
G
T
A
A
T
T
T
A
T
A
A
A
G
A
A
A
A
A
G
A
G
G
T
T
T
A
A
T
G
G
4050 |
var(4005):[T:0.0053]
|
var(4041):[C:0.0106]
A
C
T
C
A
C
A
G
T
T
C
C
A
C
A
T
G
A
C
T
G
G
G
G
A
G
G
C
C
T
C
A
C
A
A
T
C
A
T
G
G
T
G
G
A
A
G
G
C
A
4100
A
A
G
G
A
G
G
A
G
C
A
A
A
G
G
C
A
T
G
T
C
T
T
A
C
A
T
T
G
C
AAACTTTCCC ATACCTTCCT
4150
GTC
A
TCTGAG CCCTC
C
A
A
G
T
C
T
C
T
A
G
G
A
A
G
T
T
C
C
A
A
A
C
T
T
T
C
C
C
A
C
A
T
C
T
4200 |
var(4154):[T:0.0054]
|
REPEAT
T
G
C
T
A
T
C
T
T
C
T
T
C
T
G
A
G
C
C
C
T
C
C
A
A
A
C
T
A
T
T
C
C
A
G
C
C
T
C
T
G
C
C
T
G
C
T
A
C
C
4250 |
NOT SCANNED
C
A
A
T
T
C
C
A
A
A
G
T
C
A
C
T
T
T
C
A
C
A
T
T
T
T
T
G
G
G
T
A
C
C
T
T
T
A
C
A
G
T
A
G
T
G
C
C
C
C
4300
A
C
T
C
C
A
G
G
T
A
C
C
A
A
T
T
T
A
C
T
G
T
A
T
T
A
G
T
C
T
G
T
T
C
T
T
A
C
A
C
T
G
C
T
A
A
T
A
A
A
4350 |
REPEAT
G
A
C
A
T
A
C
T
C
A
A
G
A
C
T
G
G
G
T
A
A
T
T
T
A
T
A
A
A
G
A
A
A
A
A
G
A
G
G
T
T
T
A
A
T
G
A
A
C
T
4400
T
A
C
A
G
T
T
C
C
A
C
A
T
G
G
C
T
G
G
G
A
A
G
G
C
C
T
C
A
C
A
A
T
C
A
T
G
G
C
A
G
A
A
G
G
C
A
A
A
G
4450
G
A
G
G
A
G
C
A
A
A
G
G
C
A
C
G
T
C
T
T
A
C
A
T
G
G
C
A
G
C
A
G
C
C
A
A
G
A
A
A
G
A
G
C
T
T
G
T
G
C
4500
A
G
G
G
G
A
A
C
T
C
T
C
A
T
T
T
A
T
A
A
A
A
C
C
A
T
C
A
G
A
T
C
T
C
A
T
G
A
G
A
C
T
T
A
T
T
C
A
C
T
4550
A
C
C
A
T
G
A
G
A
A
C
A
A
T
A
T
G
G
G
G
G
A
A
A
C
C
A
C
A
T
C
C
A
T
G
A
T
T
C
A
G
T
T
A
C
C
T
C
C
A
4600 |
var(4568):[A:0.0111]
C
C
T
G
G
C
C
C
C
C
T
C
C
C
T
T
G
A
C
A
T
G
T
G
G
G
G
A
T
T
A
T
T
A
C
A
A
T
T
C
A
A
G
G
T
G
A
G
A
T
4650
T
T
G
G
G
T
G
G
G
G
A
C
A
C
A
G
C
C
A
A
A
C
C
A
T
A
T
C
A
G TTACTTAAAA AGTATACTTA
4700
ATAGAGATAC TTAAGGCTCC TTAAAAGGAA AAATGGAGCA TCTTCTAGTT
4750
GCAAAGTCCA CCTCTCTTTT TGTTATTGTC CTGTGACTTT AACATCTCCT
4800
CTGGCTTCAA CAATATGCTA CAGTTTTGCA AACTCTAGGT GGGACTGCTT
4850
TCTCTGTGAT TTTTTTCCCC CATATATCTT ACCAGTGAAT TTTGAATACA
4900
GCTTCAGCAA TTTTGCCAAT ACTATGCTAA ACTTTTTGCA TAGATGTGTG
4950
CAGATAGCAA CCTT
T
T
G
G
T
C
C
C
T
T
C
T
T
T
G
T
C
C
C
A
G
A
T
T
T
G
C
A
G
C
A
T
G
T
T
T
5000 |
NOT SCANNED
A
G
C
C
C
A
G
T
C
A
G
T
G
A
A
G
G
A
T
G
A
T
G
G
A
G
T
A
T
C
A
C
A
A
G
A
C
A
T
G
G
T
T
G
G
C
A
C
T
T
5050
C
T
T
A
T
C
G
T
A
T
G
A
T
G
A
C
T
A
A
A
A
A
G
G
A
G
T
G
G
A
A
A
T
A
A
A
T
G
G
G
C
T
G
A
A
G
A
A
T
A
5100
A
G
A
T
G
T
G
A
A
A
G
A
G
T
G
T
A
A
T
A
T
G
A
A
T
T
T
T
A
G
G
T
A
A
A
G
A
A
T
C
G
A
G
T
T
T
A
A
G
C
5150
T
G
A
A
T
G
T
T
G
A
T
C
T
T
G
A
A
G
G
T
C
T
G
G
G
A
T
G
A
T
G
A
A
C
A
G
G
A
A
A
A
T
A
T
G
C
A
T
T
G
5200
A
G
A
G
T
A
C
T
A
G
T
A
T
A
T
G
C
A
T
A
T
G
C
A
A
G
T
A
C
T
A
G
T
G
C
T
T
G
G
T
C
A
C
T
A
G
T
A
C
C
5250 |
REPEAT
T
A
G
A
A
T
A
T
A
G
G
A
G
A
C
A
C
T
A
A
A
T
A
A
A
T
A
T
T
T
C
T
G
A
A
T
A
A
G
T
T
T
A
A
A
T
G
A
G
T
5300
A
A
A
T
A
A
A
A
G
A
T
A
C
A
T
A
G
G
A
A
G
A
T
A
G
G
A
A
A
A
A
T
C
A
T
A
G
A
C
T
G
T
A
T
T
G
T
A
A
A
5350
A
A
C
T
T
T
T
C
C
T
T
G
C
T
C
C
T
C
A
T
G
T
G
G
A
G
A
G
A
T
T
C
A
T
G
C
T
A
T
A
G
A
A
C
A
A
A
T
C
A
5400
G
G
T
A
A
C
A
G
A
A
T
A
A
G
A
T
A
G
A
A
A
A
G
T
C
A
C
C
T
G
A
G
G
G
G
A
T
T
A
T
A
T
G
C
A
G
G
G
T
T
5450
A
G
T
G
C
A
A
C
T
G
A
A
A
A
C
A
C
T
G
G
C
A
G
A
T
A
T
T
A
A
A
A
G
A
G
A
A
A
A
A
T
G
T
A
T
A
G
G
T
T
5500
T
T
G
G
G
G
G
G
G
A
C
T
A
A
A
A
A
A
A
T
A
A
A
G
T
T
T
A
C
T
T
C
T
C
T
G
G
T
A
T
T
A
A
T
G
C
C
A
A
T
5550
A
A
T
A
T
T
T
A
T
T
T
C
T
A
A
A
A
G
A
G
T
G
A
A
G
T
G
G
A
A
A
A
T
A
A
T
T
T
C
C
T
T
A
T
A
C
T
C
A
G
5600
T
A
C
T
G
C
T
A
T
T
T
A
C
T
T
G
G
G
T
C
A
G
T
G
C
C
T
T
A
T
C
T
G
T
C
A
C
T
T
C
A
A
C
A
C
A
T
C
A
G
5650
T
A
A
G
T
A
G
T
T
A
A
A
G
A
C
T
T
T
A
T
A
A
G
A
G
A
T
A
A
T
T
C
C
T
G
A
T
C
C
T
A
A
G
T
T
A
T
A
T
A
5700
T
A
T
T
C
A
A
A
T
T
A
A
A
A
T
A
A
A
T
G
A
C
A
T
A
C
A
T
A
T
A
A
A
A
A
C
A
A
T
T
A
G
T
A
A
A
C
A
C
A
5750
A
T
A
G
T
G
T
G
T
T
C
T
G
G
G
T
C
C
A
T
A
G
T
A
G
G
C
A
T
T
A
G
T
T
A
A
T
T
A
T
T
T
A
C
T
G
A
A
T
T
5800
A
A
T
T
G
A
C
T
A
T
A
T
A
A
T
A
G
C
A
A
A
A
A
T
T
A
T
A
G
T
A
A
T
T
C
T
C
T
T
A
T
C
T
T
C
A
G
A
T
T
5850
A
C
T
T
T
T
T
T
T
T
C
T
G
A
T
G
A
C
C
T
C
T
A
G
G
A
A
G
C
T
G
G
A
A
A
T
A
A
G
T
G
A
A
A
A
T
T
T
T
T
5900
T
T
A
A
G
T
A
T
A
C
G
A
A
C
G
G
C
C
A
T
C
A
C
A
A
A
A
C
T
C
T
T
T
T
A
T
A
C
T
T
G
A
C
T
T
C
A
T
A
G
5950
G
C
T
C
T
C
A
C
T
C
A
G
G
C
T
T
G
G
C
A
A
C
T
T
T
C
T
T
A
A
C
A
T
A
C
A
G
T
T
C
T
T
A
C
A
A
A
C
A
T
6000
T
A
T
T
A
C
C
G
G
G
T
T
T
T
T
C
A
T
T
C
C
A
T
T
A
G
A
G
G
T
T
T
C
C
A
A
A
A
C
A
A
A
T
G
G
T
A
C
A
G
6050
T
G
A
A
G
A
T
G
T
C
A
C
T
A
T
A
A
G
C
A
G
G
C
C
T
A
A
T
G
A
C
C
A
A
G
A
A
G
A
A
A
T
A
A
C
A
G
C
T
C
6100
A
A
A
T
C
C
T
G
A
C
C
A
A
A
A
A
A
C
T
A
G
A
C
A
A
C
A
A
A
G
A
A
C
A
T
T
C
C
A
C
C
T
T
A
C
G
G
T
A
A
6150
T
C
A
T
A
A
T
T
A
C
T
A
T
A
A
T
T
A
T
G
A
T
C
T
T
G
A
G
T
G
A
T
C
A
G
G
A
T
A
T
A
A
T
A
A
G
T
A
T
T
6200
C
A
A
T
A
A
G
T
G
T
T
C
A
T
T
T
C
A
C
T
A
T
T
G
T
T
A
T
C
A
A
A
A
A
A
G
T
T
A
C
T
T
T
T
T
T
T
C
C
A
6250
T
T
A
T
A
T
C
C
G
C
T
G
T
T
T
A
G
G
A
A
A
A
C
A
G
G
G
A
A
G
C
A
A
A
T
A
A
A
A
T
A
T
T
T
T
T
A
A
A
G
6300
A
A
A
A
A
G
C
T
T
G
C
A
C
T
A
A
T
G
A
C
A
T
T
C
A
T
T
T
T
A
C
C
C
C
T
A
T
T
A
A
A
A
G
A
T
A
A
A
C
T
6350 |
REPEAT
T
G
G
G
C
A
T
A
T
T
G
A
A
A
G
T
T
T
A
A
C
A
A
G
T
T
T
A
T
T
C
A
A
G
C
A
T
T
C
A
G
C
C
A
C
A
G
C
A
A
6400
T
T
G
G
G
T
G
C
C
C
T
A
A
G
A
C
C
A
C
A
A
G
C
A
G
T
T
C
T
G
T
C
A
A
T
G
C
T
C
C
T
C
T
G
G
G
C
A
G
G
6450
G
A
G
G
A
A
A
C
T
T
T
T
A
T
A
A
C
G
T
A
T
T
C
T
C
A
G
A
C
T
A
A
G
A
A
A
T
A
G
A
T
A
T
T
A
G
A
C
T
G
6500
G
T
T
A
A
A
G
T
G
G
A
G
A
C
T
C
C
C
T
A
G
T
T
A
G
A
T
G
T
T
A
G
T
T
G
G
C
G
G
C
T
T
C
T
G
A
T
T
G
G
6550
T
A
A
A
G
T
C
T
C
T
A
G
T
T
A
C
A
G
A
T
T
C
G
A
A
G
T
T
T
C
A
T
T
T
T
A
C
T
G
T
T
T
A
C
T
A
C
A
T
T
6600
G
A
A
T
T
G
G
G
T
T
T
T
G
G
T
T
T
G
C
T
T
A
C
G
T
A
G
G
A
A
C
C
C
A
A
G
G
C
G
C
T
G
A
T
G
T
T
G
T
C
6650
T
C
A
G
C
C
T
A
G
T
G
G
C
C
T
C
C
C
A
A
G
T
T
A
T
A
T
A
G
C
A
T
C
C
C
T
T
C
A
A
A
A
A
T
G
A
T
T
T
T
6700
T
A
A
A
T
T
T
T
T
A
A
A
T
G
A
T
T
C
T
T
A
A
A
T
A
G
G
T
A
C
A
A
T
T
A
C
T
A
G
C
T
A
A
A
A
T
T
T
T
C
6750
T
G
G
A
A
A
A
T
T
T
A
C
T
T
T
A
A
A
T
G
A
C
T
C
A
T
T
C
T
C
C
A
A
G
G
T
T
G
C
C
A
A
A
T
A
A
A
A
A
A
6800
T
A
G
C
A
A
G
C
A
A
T
A
G
G
G
C
T
G
G
G
C
G
T
G
G
T
G
G
C
T
C
A
C
A
C
C
T
G
T
A
A
T
C
C
C
A
G
C
A
C
6850 |
REPEAT
T
T
T
G
G
G
A
G
G
C
C
A
A
G
G
C
A
G
G
T
G
G
A
T
C
A
C
A
A
G
G
T
C
A
G
G
A
G
T
T
T
G
A
G
A
C
C
A
G
C
6900
C
T
G
G
C
C
A
A
C
A
T
G
G
T
G
A
A
A
T
C
C
C
G
T
C
T
C
T
A
C
T
A
A
A
A
A
T
A
C
A
A
A
A
A
T
T
A
G
C
T
6950
A
G
G
T
G
T
G
G
T
G
G
C
G
T
G
C
G
C
C
T
G
T
A
G
T
C
C
C
A
G
C
T
A
C
T
C
A
G
G
A
G
G
C
C
A
A
G
G
C
A
7000
G
G
A
G
A
G
T
T
G
C
T
T
G
A
A
C
C
C
A
G
G
A
G
G
T
G
G
A
G
G
T
T
G
C
A
G
T
G
A
G
C
C
G
A
G
A
T
C
A
C
7050
G
C
C
G
T
T
A
C
A
T
T
A
T
A
G
C
C
T
G
G
G
C
G
A
C
A
G
A
G
C
A
A
G
A
T
T
C
C
A
T
C
T
C
A
A
A
A
A
A
A
7100
A
A
A
A
A
A
A
A
A
A
A
G
C
A
A
G
C
A
A
T
A
G
C
T
A
G
T
G
C
A
G
T
A
C
A
C
T
T
C
C
A
A
A
C
A
C
T
T
C
A
7150
C
A
C
A
A
G
A
C
A
G
C
T
T
G
T
A
T
G
G
A
A
G
A
G
C
T
A
A
T
T
A
A
G
T
G
A
C
T
A
A
C
A
T
T
T
C
A
C
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A
A
T
C
C
C
A
C
T
G
C
T
T
C
T
G
G
G
A
T
T
G
G
G
C
A
G
C
T
C
T
C
T
T
A
A
T
C
T
T
C
A
A
C
C
T
T
A
9900
G
A
G
C
C
T
C
T
T
C
A
A
C
A
C
A
G
G
T
T
A
C
C
C
A
G
G
G
C
C
C
C
A
G
A
G
C
A
G
A
C
T
A
T
C
T
C
A
T
C
9950
A
A
A
A
C
A
C
A
C
C
A
G
T
G
T
G
T
T
G
G
T
T
A
A
T
A
A
T
G
C
A
G
A
T
A
C
C
T
G
G
G
C
C
C
T
G
C
C
C
C
10000 |
REPEAT
A
G
A
C
C
C
A
C
A
G
A
A
T
C
A
G
A
A
T
C
A
A
T
G
G
A
G
T
T
G
T
G
T
C
C
C
A
G
G
A
G
T
T
T
G
C
A
T
T
T
10050
C
A
C
T
A
A
G
T
T
C
A
T
C
A
G
T
A
G
A
T
T
C
C
T
G
T
G
C
A
T
A
T
T
C
A
G
A
C
T
T
A
A
G
A
A
A
C
A
T
C
10100
A
G
G
C
C
T
T
A
G
A
C
T
T
T
T
G
A
A
A
A
A
C
C
A
C
A
T
C
T
T
T
A
A
A
T
T
C
T
G
T
A
G
C
A
G
T
G
A
A
A
10150
G
T
C
C
A
G
A
G
C
T
C
T
C
A
C
A
C
A
A
G
C
T
C
T
G
C
T
C
T
T
G
T
C
T
T
A
A
A
G
A
A
G
G
G
A
A
A
G
A
A
10200
A
A
A
T
A
T
A
T
C
T
C
A
C
T
T
T
T
A
C
C
A
G
T
G
A
G
C
T
T
A
C
A
A
C
T
G
A
G
G
A
A
A
C
A
A
G
A
C
A
A
10250
A
A
C
T
T
A
T
T
C
C
T
C
A
G
T
C
A
G
A
T
T
A
C
T
C
G
G
C
C
C
C
A
C
A
A
A
T
G
T
T
G
A
G
T
A
G
A
A
A
T
10300
T
G
G
T
A
A
A
G
T
A
T
C
A
A
A
G
A
T
C
A
A
T
A
A
G
A
T
G
A
A
A
G
A
A
G
G
C
A
A
C
A
C
A
C
A
C
A
C
A
C
10350
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
A
C
C
C
A
T
G
A
T
G
A
T
G
A
G
C
A
G
T
T
T
T
10400
T
A
T
T
C
A
A
A
T
G
G
A
A
G
A
G
C
C
T
T
G
G
T
T
G
T
G
G
A
G
G
G
G
C
T
T
G
C
C
A
A
A
G
G
C
C
A
G
A
A
10450
T
C
T
A
A
G
T
G
G
G
T
C
C
T
G
C
C
A
A
A
T
G
G
C
A
A
C
A
T
G
A
T
G
T
T
G
C
C
C
A
T
G
A
A
T
A
G
A
T
C
10500
C
CACTGGGCT ATATAAGCCT TCAGTTAAGG TTGATAACAC AAGAAATTAA
10550
TTCAAACCAA ATTTACTTTC TTTCCATCTT TTCTTTTCCA GATTGCTATT
10600
TACCTCACTG ATATTTTAAA GAAAGTTTTA AGCAACTATT AATGGACATT
10650
CACTAGA
A
TA CAAACATTCA ATGTTAAGTA TCTGTACTAG TGA
G
GGATTA
10700 |
var(10658):[G:0.0287]
|
var(10694):[A:0.0230]
AAAAACACAG GGATTATTTA AATTCAAAAG TAATTTAAAA ACCACACACA
10750
TTGCATGCAT CAACAACTCT AGCTTTGATT TAGTGCTGTT AAAAGAAAT
A
10800 |
var(10800):[T:0.1782]
T
AAAAGAATT AATTTAGCTT TATTAATCTT ACTTTAAGGA AAAAAATATA
10850 |
var(10801):[A:0.1782]
TAAATATACA CACACATACT TTGAAGTCTC AAATATCCAG A
T
TGATTAAT
10900 |
var(10892):[C:0.0160]
TATAAACTCA AATTTTTCCA GTAGCTAAGA GAGGTAGAAG TGAA
A
AAAAT
10950 |
var(10945):[:0.9943]
GTCTTAATTA ACTGCTTTAT TTTAATATTT CAACTTAATT TTGTATTCTA
11000
TTCCATTACA TAATATGCCT GTGTCTTAAT ATAAAAATCA TGGAGAAAAT
11050
ACTTCAGTAA GATGCACTAC ATTTCTATGA TGCCTTCGCA GATGGTTCTC
11100
TGACATATAC CTGATATGGA AAGCCTCACA TCATTAAAAT AACAGGGCTA
11150
ACTACCAGCC CTCCACTTCA ATTTTGGAGG CATCCCTACA ACAGGCAAAC
11200
ATTCAATGTG ATGTGCTCAT TAATTTCTCT AATTATAATG TTATTAAATT
11250
ATAATGATAA TGTCATCCCT AGAAATGATG GCTTCTGATA GAGTTGTCTT
11300
GTTTTTCTTT GCAG
G
G
A
A
C
A
T
T
C
C
A
A
T
A
T
C
T
A
T
C
T
T
C
A
A
A
A
T
G
G
C
C
C
A
G
A
11350 | Exon 2
E H S N I Y L Q N G P D 61
T
A
G
A
A
T
T
G
G
G
A
G
A
C
T
A
T
A
T
A
A
G
A
A
G
G
C
C
C
T
T
T
A
T
C
T
T
C
A
G
T
A
C
A
C
A
G
A
T
G
11400
R I G R L Y K K A L Y L Q Y T D 77
A
A
A
C
C
T
T
T
A
G
G
A
C
A
A
C
T
A
T
A
G
A
A
A
A
A
C
C
G
G
T
C
T
G
G
C
T
T
G
G
G
T
T
T
T
T
A
G
G
C
11450
E T F R T T I E K P V W L G F L G 94
C
C
T
A
T
T
A
T
C
A
A
A
G
C
T
G
A
A
A
C
T
G
G
A
G
A
T
A
A
A
G
T
T
T
A
T
G
T
A
C
A
C
T
T
A
A
A
A
A
A
11500 |
var(11490):[T:0.0105]
P I I K A E T G D K V Y V H L K N 111
C
C
T
T
G
C
C
T
C
T
A
G
G
C
C
C
T
A
C
A
C
C
T
T
T
C
A
T
T
C
A
C
A
T
G
G
A
A
T
A
A
C
T
T
A
C
T
A
T
A
11550 |
var(11515):[A:0.0263]
L A S R P Y T F H S H G I T Y Y 127
A
G
G
A
A
C
A
T
G
A
G
G
GTAAGTTC AGCTCATGTA G
C
TGGAATTT CCTCTTACTT
11600 |
var(11582):[T:0.1737]
K E H E 131
TT
C
AGTAGAA GTGCCTTTTA GCTTCTAAAA T
T
GTGGACTT CTCTCCTGGA
11650 |
var(11603):[G:0.0053]
|
var(11632):[G:0.0053]
TAAGACATAT AACTGCCATT CAGCTCTTAA CTA
T
T
T
T
T
T
T
T
T
T
A
T
T
T
T
T
T
11700 |
REPEAT
|
var(11687):[A:0.0053]
T
T
T
A
A
T
T
T
T
T
T
T
T
G
A
C
T
T
C
T
G
T
C
A
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
C
A
C
G
A
C
11750 |
var(11703):[A:0.0211]
|
var(11704):[T:0.1737]
|
var(11721):[T:0.1789]
|
var(11723):[T:0.0947]
C
T
C
G
G
A
T
C
A
C
T
G
C
A
A
G
C
A
C
C
G
C
A
T
C
C
G
G
G
G
T
T
C
A
A
G
C
C
A
T
T
C
T
C
C
T
G
C
C
T
11800
C
A
G
C
C
T
C
C
C
G
A
G
T
A
G
C
T
G
G
G
A
C
T
A
C
A
G
G
C
G
C
C
C
A
C
T
A
C
C
A
T
G
C
C
T
G
G
C
A
A
11850 |
var(11849):[T:0.2474]
A
C
T
T
T
T
T
T
A
T
T
T
T
T
A
T
T
T
T
T
T
T
T
T
T
G
C
A
T
T
T
T
T
A
G
T
A
G
A
G
A
C
G
G
G
G
T
T
T
C
11900 |
var(11865):[T:0.0053]
|
var(11878):[G:0.0789]
|
var(11883):[C:0.0053]
A
C
C
G
T
G
T
T
A
G
C
C
A
G
G
A
T
G
G
T
C
T
T
G
A
T
C
T
C
C
T
G
A
C
C
T
C
C
T
G
A
T
C
T
G
C
C
C
G
C
11950 |
var(11949):[A:0.0053]
C
T
C
A
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
T
G
A
G
T
C
A
C
T
G
C
A
C
C
C
G
G
C
12000 |
var(11981):[T:0.0053]
|
var(11989):[T:0.0263]
C
G
ACTATTTT ATTAATAGGT ACTTTGTTTC CATATAATAA TGGCATGTTT
12050 |
var(12002):[A:0.4158]
CTCTTGGTTG TGCTCTTT
C
G TGGAAAGTGT GAATGTGAGA GAATTTCTAG
12100 |
var(12069):[T:0.0053]
GTGGACTCAG TGAGAGTCAG AGAGAGCTGG AGCTTCTTTC CCAGAGCCCA
12150
GTCCTTTCTG GCCAAATAGA ATAAGAGAAA TGGACAAAGT GCATCAGAGC
12200
CTAGAAGAGG CAAAATCCAG AGGGAAGAGA AAGAAGGACT CAAGATGTGG
12250
ATTGCCTTAT CTTTGAAGTT CCTACATGTA AACATAC
T
GT GCTGTTGTTA
12300 |
var(12288):[C:0.0323]
CCTCCCATCC TAACTTTATA TAAACTCTGC CCCAGCTAAG GTGGCATAAG
12350
TAGTCTCATG TCAGTCAAAT GGTACATATG CCTGGATGAC
T
G
T
A
G
T
C
A
C
A
12400 |
NOT SCANNED
T
A
T
G
A
G
A
C
A
C
A
A
T
T
A
A
C
T
G
A
A
A
A
A
G
T
C
A
T
T
T
G
A
A
T
G
T
A
G
G
A
C
T
T
G
G
A
A
G
C
12450
C
T
T
G
A
A
A
A
T
A
G
T
A
C
C
T
G
A
A
A
A
A
C
A
A
A
G
A
T
A
A
G
G
T
T
T
G
G
T
G
C
C
T
G
T
G
A
T
C
T
12500
C
A
T
T
C
T
T
A
G
T
C
C
T
T
A
A
C
A
A
T
G
A
T
G
G
T
A
A
A
A
A
A
G
G
T
G
G
T
A
T
T
T
T
G
T
A
G
T
G
A
12550 |
REPEAT
T
G
A
A
A
A
G
C
A
A
G
G
G
C
T
T
T
G
A
A
A
T
T
A
A
T
A
G
A
C
A
A
A
G
G
T
C
T
G
A
G
C
C
C
C
A
G
C
C
T
12600
T
G
C
C
T
T
T
C
A
C
T
G
T
T
T
G
A
G
T
G
A
C
C
T
T
G
G
A
C
A
A
A
T
T
A
C
T
T
A
A
G
T
T
C
T
T
T
C
A
G
12650
C
T
T
C
A
G
T
T
T
C
C
T
C
A
T
C
T
A
T
A
A
A
A
T
A
G
A
G
A
T
A
A
T
A
A
G
A
A
T
A
C
A
T
A
G
T
A
A
T
A
12700
C
C
T
C
A
A
T
A
A
C
T
A
T
C
A
G
C
T
G
C
T
A
T
C
A
T
A
A
G
C
A
A
A
A
A
T
G
C
T
G
A
A
G
T
C
A
T
G
C
T
12750
A
C
A
G
T
T
C
A
T
T
G
A
A
A
T
T
A
T
A
A
T
G
A
T
C
G
A
A
T
A
G
G
G
A
A
A
T
T
A
A
T
T
T
A
A
A
A
T
T
A
12800
G
A
T
T
T
G
A
T
T
C
A
T
T
A
T
T
A
G
T
T
G
T
C
T
T
A
T
T
A
A
A
A
G
A
G
A
T
A
T
T
G
G
T
T
T
A
G
A
A
A
12850
G
T
G
A
A
T
G
T
G
T
T
G
A
C
T
T
T
T
T
T
T
G
T
T
T
T
T
G
T
T
G
T
T
G
T
T
T
A
G
G
G
A
T
A
A
A
T
T
A
C
12900
A
T
T
C
A
T
A
G
C
A
T
A
A
A
A
G
G
C
T
G
A
C
T
G
C
C
A
T
C
C
T
A
T
T
T
C
T
T
T
T
T
A
A
T
G
A
T
T
T
C
12950
A
T
G
G
C
T
T
A
C
T
A
G
G
G
A
A
T
T
A
C
C
A
T
T
C
A
T
T
T
T
A
A
A
G
G
T
A
T
G
G
T
A
A
T
G
G
A
A
C
T
13000 |
REPEAT
G
T
G
G
T
T
T
T
G
T
T
A
G
A
A
G
A
A
A
A
A
A
A
G
G
G
T
T
C
C
T
A
T
C
T
T
T
T
A
G
A
G
A
T
A
C
A
T
A
C
13050
T
C
A
A
G
T
A
T
T
T
A
T
G
A
A
T
G
G
A
A
T
A
T
G
A
T
G
T
C
T
G
A
G
A
C
G
T
G
C
T
T
T
A
A
A
A
T
A
A
T
13100
T
T
G
A
T
G
A
T
A
C
T
G
G
G
G
A
T
A
A
G
A
G
T
G
T
G
T
G
G
G
G
G
T
A
C
A
G
A
T
G
A
A
A
C
A
A
G
G
T
T
13150 |
var(13144):[G:0.0161]
G
G
C
C
T
T
G
A
G
T
C
G
A
T
C
A
T
T
G
T
T
A
A
A
G
C
T
G
G
T
T
T
G
A
T
G
G
G
T
A
C
A
C
A
G
A
G
G
T
T
13200
C
A
G
C
A
T
T
T
T
C
T
T
C
T
C
T
C
A
A
C
C
T
T
T
G
T
G
T
G
T
G
T
T
T
G
G
A
A
A
T
T
T
CCAAAATT
13250
GAGAGTAGAA ATGTTTTTAA TTTTATGGTT ACTTCGTGGG CAAAAATCTG
13300
AGATCATATA AGAAGTTTTG AATTTAGAAG AGGGTAGCCT TTTTGCTCAG
13350
ACTCCCA
T
AC CATGACCCGA GTTCTTTACA TTGCAAACAA AAAGTCATTA
13400 |
var(13358):[C:0.0054]
TGCTCTCTGA AAACCCAATC AAATATAAAA AAATAATAAA AATGTCTGTG
13450
AAGCTTCTAC ACACCCTAGC CATTAGCCTT TCATTTTCCT GTGTCCAAAT
13500
AGGATA
A
CAC ATCCCCAAGG AT
C
A
C
A
T
A
G
T
A
G
A
T
G
T
T
T
A
A
T
A
A
A
T
G
T
T
T
G
13550 |
var(13507):[T:0.0632]
|
REPEAT
C
T
G
A
A
T
G
A
A
T
T
A
A
T
GGACTA TCTATTCTCT CATTTAAGTT CAAACACATT
13600
CACTTTGCAC CTTCATTGCA TGTTGCTTCC TAG
G
G
G
C
C
A
T
C
T
A
C
C
C
T
G
A
T
13650 | Exon 3
G A I Y P D 137
A
A
C
A
C
C
A
C
A
G
A
T
T
T
T
C
A
A
A
G
A
G
C
A
G
A
T
G
A
C
A
A
A
G
T
A
T
A
T
C
C
A
G
G
A
G
A
G
C
A
13700
N T T D F Q R A D D K V Y P G E Q 154
G
T
A
T
A
C
A
T
A
C
A
T
G
T
T
G
C
T
T
G
C
C
A
C
T
G
A
A
G
A
A
C
A
A
A
G
T
C
C
T
G
G
G
G
A
A
G
G
A
G
13750
Y T Y M L L A T E E Q S P G E G 170
A
T
G
G
C
A
A
T
T
G
T
G
T
G
A
C
T
A
G
G
A
T
T
T
A
C
C
A
T
T
C
C
C
A
C
A
T
T
G
A
T
G
C
T
C
C
A
A
A
A
13800
D G N C V T R I Y H S H I D A P K 187
G
A
T
A
T
T
G
C
C
T
C
A
G
G
A
C
T
C
A
T
C
G
G
A
C
C
T
T
T
A
A
T
A
A
T
C
T
G
T
A
A
A
A
A
A
G
GTAC
13850
D I A S G L I G P L I I C K K 202
ATCTTCTCCT TATTGCACAT GCTATATGAC CAAAAGACAG GGGCAGGGCA
13900
GTTTGTCTTT TAAAAAGAAA TCAAGTCTTC TGTGCTGAGA TTGAGCAGGT
13950
A
AGGTAGAGA GGTGGTAAGT AGAA
A
AAAAG GAAG
G
GAAGA GCCAGGCAGG
14000 |
var(13951):[G:0.0053]
|
var(13975):[G:0.0632]
|
var(13985):[A:0.0632]
ACTAGGAGAA GAAGGGATAA ATAGAACAAG CATTCCTACG GGGAAAATGC
14050
CAATGAAGGT AATGTGAAAG AAATA
T
ATTC TCTCAGGG
T
T CAGTTTGCTG
14100 |
var(14076):[A:0.0266]
|
var(14089):[A:0.0638]
TATCTAACTT CCAACAGTGG TGCTGAAGAG ACATATGACT TTACCAAATG
14150
TGACTACCAA AAGGGCACTC CACGGTGATA GATCTGTAGT TACTCATACT
14200
ATATTGGTAA ACATAATATC ATAGTATTTA TTTCTAACAT CATGAAAAAG
14250
ACAACGGAGC TCA
A
GAGCCT GAAATACAAT TCTAACTTGA ACAATC
G
TTA
14300 |
var(14264):[G:0.0053]
|
var(14297):[C:0.0158]
CCTGTAAAGA CTTGTCTCTG TTTGTGGCTA TATGCACCAG AAAATAGACG
14350
CACAACTTTG AATTCCAATC TTCCCATTTG CCAAAAAGCA TTTAATAGTT
14400
ATGTGGTCAG TGGACATCCA GACACAGGAG TGTCTTCCAA GCACCAGATA
14450
CTGATCATAA AAATTCCCTG AGTGTTTCTG TCTGTAAAAC AGGAGTGACT
14500
GGTCCAGACT TGTGATTTAT TCGAAAAAAT AAATACTAAC ATTTTTAAAA
14550
ACTATAAATC ACCTGAAAAC ATAAATCAAA ATACATGCTA AAAGTTTAGT
14600
CTTGCTAAAA TAGTAACTTT AACTCCAG
A
T
T
C
T
C
T
A
G
A
T
A
A
A
G
A
A
A
A
A
G
A
14650 | Exon 4
D S L D K E K E 210
A
A
A
A
C
A
T
A
T
T
G
A
C
C
G
A
G
A
A
T
T
T
G
T
G
G
T
G
A
T
G
T
T
T
T
C
T
G
T
G
G
T
G
G
A
T
G
A
A
A
14700 |
var(14690):[C:0.0105]
K H I D R E F V V M F S V V D E 226
A
T
T
T
C
A
G
C
T
G
G
T
A
C
C
T
A
G
A
A
G
A
C
A
A
C
A
T
T
A
A
A
A
C
C
T
A
C
T
G
C
T
C
A
G
A
A
C
C
A
14750
N F S W Y L E D N I K T Y C S E P 243
G
A
G
A
A
A
G
T
T
G
A
C
A
A
A
G
A
C
A
A
C
G
A
A
G
A
C
T
T
C
C
A
G
G
A
G
A
G
T
A
A
C
A
G
A
A
T
G
T
A
14800
E K V D K D N E D F Q E S N R M Y 260
T
T
GTAAGATT ACAGCAGACA TGTTAACTTT ACTTTTTTTT CCCTTGATCC
14850
260
ATTAATTCTG CTAAGCTTAT TCCCTCACAT AAATAAGTAC TGTGTGTCTA
14900
GTCTGTGGTC CTTATAACAA AGCATATTGG ATGTGCAATT TGATATTCAG
14950
CTAA
G
TAAGT CAGAATAAAA ACTCTAAGCC AGGTAAAG
C
C AGATACACCA
15000 |
var(14955):[A:0.0054]
|
var(14989):[:0.0054]
AACTTGTTCC CCAACTGGTA AGGATAAAGC ATCAATTATG GTTTAATGCA
15050
TATGTATGTG ACATTAATAT ATTTATTTAT CCACTAGACT CATTCTAAAA
15100
ATTATTTGAG GCAGCTCCAA ATTATTAAAC TAAATGCTTA AAACCATATT
15150
ATATTTTAAA GCATCTAACT ATATTTAAGA AAATAGTTCA AACCACGAGT
15200
TCTGAAAGGT ATTCGTTTTA CATACTATGT TGCCCTCACT GGGCCCCTTA
15250
GTCTGCATCA TTCGTTTCTA CATTTCAGTT CACTTTACTT TTCTAGAAAT
15300
GCTTTTTTTA CAGTTTAGAC TTTTTCTTAA TTCTCAGACA CAAAATAATG
15350
AGCTTAGTAA GATTATCTAT TTCTCATAAT TTGCATGAGA AACAGAGTCC
15400
CTTAACAACA ACTAGACCAA TAAGTAGATA TTTTCGTTT
A
T
T
T
GTTTGTG
15450 |
var(15440):[:0.0057]
TTTAACTTCT TCAAAATAAC CTGTACTCAG AAAC
C
GAGAG CACAAAAATA
15500 |
var(15485):[T:0.0632]
ACGATACTAC CAAAGTAGAA AAATAAACT
A
GTTAACAAAG TACAGATTTT
15550 |
var(15530):[G:0.0053]
GTTTCCAACT TTTACTTAT
A
TCTGGGTGGA AGGTCCTCTT TCCATACTTT
15600 |
var(15570):[G:0.0842]
AATCCTGTCT CTGTTGTGTA CTAACAAAAA TAGTTGTTAT AAAAAGATAC
15650
TCAAAATTCT AGCCTGAGCA GGTTTGATTT GGT
A
CCAGTG TTACATGTGG
15700 |
var(15684):[T:0.1059]
TGCACTCAGG ATTCTTCCCA GAACTAATTT CCACTT
G
GGA AATTTTTAGG
15750 |
var(15737):[C:0.0235]
GCCACCCAGT TTGAACAGTG ACCATAAGTT TCTTCTGAGG GTTTCAGGCC
15800
ACCTTGCCTA TGAACTTTTA GGTCTTTGTG GCTCTGTCCC TGCTGCCCTT
15850
CTACATTTTT TCCCTCCTTC ATATCTCTTC CAATCTTAAA AATTTTGTCT
15900
TGCAATCTTT AAAAAAAAGC TATTCTTATG TACTTTTTAC AAAATAAATT
15950
TATGGTAGAA AATTGGAAAT TTTCTGACAA GCAAAAACAT CCATACTACC
16000
AACATGATGA ATAACTGATT GAATACTAAT ATTCA
A
TCTT TTTTCTATTA
16050 |
var(16036):[G:0.0211]
ATTCTATGTG TGTTTTGTTT ATATGTATGT ATATATGCAC ACCTCTGTAT
16100
TTACACACAC ACACAATGTG TACAGTTTAT AACAAAGACA GCAAATAGGT
16150
TTTATCTTCA GTATTGTGTT CATCTGTTAA TATG
G
T
A
T
T
G
A
T
A
A
G
A
A
T
C
C
16200 |
REPEAT
T
C
A
G
G
C
T
G
A
A
T
T
C
A
G
T
T
C
C
A
A
A
A
T
G
A
A
A
G
A
G
T
G
C
T
G
T
G
A
T
T
G
A
T
T
A
G
C
A
A
16250 |
var(16234):[T:0.0426]
T
G
T
C
T
G
A
C
A
T
G
A
G
T
A
T
A
G
G
G
G
G
C
A
G
G
A
A
T
A
C
C
A
G
C
A
T
G
T
G
T
G
C
C
A
G
A
T
A
T
16300 |
var(16275):[A:0.0319]
T
T
G
C
C
A
T
T
C
C
AAATTGATTC TATTTATATA GAGGTAACTC TCACTATCTC
16350
AAGCATTAAT GACTCTTAGT CACAAACTCT G
C
TCTTGACT TACAG
C
T
G
T
G
16400 |
var(16382):[T:0.0474]
| Exon 5
S V 262
A
A
T
G
G
A
T
A
C
A
C
T
T
T
T
G
G
A
A
G
T
C
T
C
C
C
A
G
G
A
C
T
C
T
C
C
A
T
G
T
G
T
G
C
T
G
A
A
G
A
16450
N G Y T F G S L P G L S M C A E D 279
C
A
G
A
G
T
A
A
A
A
T
G
G
T
A
C
C
T
T
T
T
T
G
G
T
A
T
G
G
G
T
A
A
T
G
A
A
G
T
T
G
A
T
G
T
G
C
A
C
G
16500
R V K W Y L F G M G N E V D V H 295
C
A
G
C
T
T
T
C
T
T
T
C
A
C
G
G
G
C
A
A
G
C
A
C
T
G
A
C
T
A
A
C
A
A
G
A
A
C
T
A
C
C
G
T
A
T
T
G
A
C
16550
A A F F H G Q A L T N K N Y R I D 312
A
C
A
A
T
C
A
A
C
C
T
C
T
T
T
C
C
T
G
C
T
A
C
C
C
T
G
T
T
T
G
A
T
G
C
T
T
A
T
A
T
G
G
T
G
G
C
C
C
A
16600
T I N L F P A T L F D A Y M V A Q 329
G
A
A
C
C
C
T
G
G
A
G
A
A
T
G
G
A
T
G
C
T
C
A
G
C
T
G
T
C
A
G
A
A
T
C
T
A
A
A
C
C
A
T
C
T
G
A
A
A
G
16650 |
var(16607):[C:0.0105]
N P G E W M L S C Q N L N H L K 345
GTAGGACATC TTTACCTGAA ATTAGCAGTC AGCTGAAAAA GGTGGTTACT
16700
GGGAATCAGA ATCTAAAAGC TAAATATCTT TGAAATAATC TGAGCTTTGA
16750
ACTGGCATCT TAGTTTTATC CCTATGATGG TATATATAAT AATGTAATAA
16800
AAAAAGACTG TAAGACAGGA ATATTATAAA GTAATGAAAT TTGAAAATAT
16850
ATTAGTTTTT GGAAAGAACA ACTGGCCCTG AAAGTATAGT ACTATATATA
16900
CTTACTCAGC TTTGTAAAAT ATACCAGTGT TGTAACATCC AGAAAAATTG
16950
TATGTTGCAC TGGAA
A
GCAC CCTGTTTTTC GACTTATTTC TGTCAAGTAT
17000 |
var(16966):[G:0.1264]
AATTAACTTT GTTCTTTATT TGAGCCTGGC CAT
C
CCTTAG TTTAACTCGA
17050 |
var(17034):[T:0.0106]
TAAATCCTTC CTTTATCTCT TTAACTTAGG CAATAAAAAC ATTCCTTGTT
17100
CTTGAAAAAT ATTAGTTTTT AATATTGGTC TACTGAATAA ATTAAGTTTA
17150
ACATAGGAGT TCAGATATTT TACTTTGACG TGCAAATATA ATTGCTTTTA
17200
TCAAATATGC TCTGGGCCAC AGAAGGCCCA GCACAGCAGA TGCACAACCA
17250
TCTTGTACAA GACAGCAATA ATATAAGCTC ATTTGGTACC TCCTCCTTGT
17300
ACCT
C
CTCCT CCACCCAATG CAACCCCTTA AAATATGTCA AAGCCTCTCT
17350 |
var(17305):[T:0.0057]
TCTCTGCTTA TCTACAGATT TGTTCTTTTT CTCTCATTGA AAGAACTACC
17400
AAGTGAAACC CCACAGAAAC TGGTACCATA TTTTGAAAAC ATATATGCTT
17450
AATATCTCTA TGCTGTATGT ACATAAAAAA CAAAGTATAT CTGTTTTAAA
17500
CTTGAGTTTT CCATCATTAA TTTATTTACA GCTGTCTGCC CTAGTTTATA
17550
GTACTGTTGC TATCTGTCT
A
TTCCTTCAAT TTCT
A
CTTGT CATCACCCGA
17600 |
var(17570):[G:0.0484]
|
var(17585):[T:0.0054]
GCAGTGTTTA CAGGGCAATA GG
A
GAGAGAA ACATTGTCTT CATTAATCAA
17650 |
var(17623):[G:0.0108]
TGCCTCTTTC TGTTTCATTT CAG
C
C
G
G
T
T
T
G
C
A
A
G
C
C
T
T
T
T
T
C
C
A
G
G
T
C
C
17700 | Exon 6
A G L Q A F F Q V 354
A
G
G
A
G
T
G
T
A
A
C
A
A
G
T
C
T
T
C
A
T
C
A
A
A
G
G
A
T
A
A
T
A
T
C
C
G
T
G
G
G
A
A
G
C
A
T
G
T
T
17750 |
var(17735):[T:0.0054]
|
var(17736):[T:0.0161]
Q E C N K S S S K D N I R G K H V 371
A
G
A
C
A
C
T
A
C
T
A
C
A
T
T
G
C
C
G
C
T
G
A
G
G
A
A
A
T
C
A
T
C
T
G
G
A
A
C
T
A
T
G
C
T
C
C
C
T
C
17800
R H Y Y I A A E E I I W N Y A P S 388
T
G
G
T
A
T
A
G
A
C
A
T
C
T
T
C
A
C
T
A
A
A
G
A
A
A
A
C
T
T
A
A
C
A
G
C
A
C
C
T
G
G
A
A
G
GTAAT
17850
G I D I F T K E N L T A P G S 403
TTACAAAAAA AGAGTACTAT TTCAAAATAT GCTCTCCCCC GCACAAAGGA
17900
ACTACAAAAG GCTAATTCAG CAATTAAAAT TTTAATTGG
T
ATCTGAAATT
17950 |
var(17940):[C:0.0053]
GAGTAACTAG ACTGCTAAAT ATTTATTAAG GTATTTGATG TAAGAGTCTG
18000
AGCTTGAGAA CTATGAGTTT TGAGTCCATG AAAAAAGATG GGTTCAAAAG
18050
TTATCAAATG CTTGACAAAG TCCTAAGAAA ACACTGAATA CTATTAGATA
18100
AATCAATTAA TTTGCTTCCC ATTTCAGAAA ACGTGGCAC
T
G
T
A
C
G
A
T
T
C
A
18150 |
REPEAT
|
var(18144):[T:0.1170]
G
C
A
G
C
A
T
T
A
A
G
T
A
C
A
G
T
T
A
C
A
C
T
A
T
T
G
C
A
T
A
G
C
C
G
T
C
A
C
C
A
C
T
A
T
C
C
A
T
T
18200
T
C
C
A
G
A
A
C
T
T
T
T
T
T
T
T
T
A
T
C
A
T
C
C
C
A
A
A
T
G
A
A
A
A
C
T
C
T
G
A
A
C
C
C
T
T
T
A
A
A
18250
C
A
A
T
A
A
C
A
A
C
C
T
T
C
T
T
C
C
A
C
T
C
T
T
T
C
T
C
C
A
C
C
C
C
C
T
G
A
T
A
A
G
C
T
C
G
A
T
T
C
18300 |
NOT SCANNED
T
A
C
T
T
T
C
T
G
T
C
T
C
T
A
T
G
A
G
T
T
T
T
C
C
T
A
T
T
C
T
A
G
G
C
A
A
C
T
C
A
T
A
C
A
A
G
T
G
G
18350
A
A
T
C
A
T
A
C
A
A
T
A
T
T
G
G
T
T
C
T
T
T
T
G
T
G
T
C
T
T
T
T
A
T
A
T
C
A
C
T
T
A
G
C
A
T
A
A
T
G
18400
T
T
T
T
A
A
G
A
T
T
T
G
T
T
C
A
T
G
T
T
G
T
A
G
C
A
T
G
C
A
T
C
A
G
A
A
T
T
T
C
A
T
T
C
C
T
C
T
T
T
18450
A
A
G
G
C
T
G
A
A
T
A
A
T
G
C
T
T
C
A
T
T
G
T
A
T
G
T
A
T
A
T
A
C
C
A
T
A
T
T
T
T
G
T
T
T
A
T
T
C
A
18500
T
T
C
A
T
C
T
G
T
T
G
A
T
A
A
A
C
A
T
T
T
G
G
G
T
C
A
T
T
T
C
C
A
C
C
T
T
T
T
G
G
C
T
A
T
T
G
T
G
A
18550
C
T
A
A
T
G
T
T
G
C
T
A
T
G
A
A
C
A
A
T
T
G
T
T
A
T
A
C
A
A
A
T
A
T
C
A
C
T
G
T
T
C
A
A
A
T
C
T
C
T
18600
G
C
T
T
T
T
A
A
T
T
A
T
T
T
T
G
C
A
T
A
T
C
C
A
G
C
T
A
G
A
A
G
C
G
A
T
T
C
C
G
C
T
T
C
T
A
G
C
T
G
18650
G
A
T
A
T
G
C
A
A
A
A
T
A
A
T
T
A
A
T
A
G
A
A
A
T
G
G
T
A
A
T
T
C
T
A
T
T
T
T
T
A
A
T
T
T
T
T
T
G
A
18700
G
G
A
A
C
C
A
C
A
T
T
A
C
T
G
T
T
C
T
C
C
A
T
A
G
C
A
A
C
T
G
C
A
C
C
A
T
T
T
T
A
C
A
G
G
C
T
C
A
T
18750
C
A
G
C
A
A
T
G
T
A
C
A
G
G
G
G
T
T
T
C
A
A
T
T
T
C
T
T
C
A
C
A
T
T
C
T
C
A
T
C
A
A
C
A
C
T
T
G
T
T
18800
A
T
T
T
T
C
T
G
T
T
T
T
G
T
T
T
T
T
T
T
T
T
T
T
A
A
T
A
A
T
A
A
C
C
A
T
C
C
T
A
A
T
G
A
G
C
A
T
A
A
18850
G
T
G
A
T
A
T
T
T
C
A
T
A
G
T
G
G
T
T
G
T
G
A
T
T
T
G
C
A
T
T
T
T
C
T
T
A
A
T
G
A
C
T
A
G
T
A
A
T
G
18900
T
T
G
A
G
G
A
T
C
T
T
T
T
C
A
T
G
T
A
C
T
T
T
T
T
G
G
T
C
A
T
T
T
G
T
G
T
A
T
C
T
T
C
T
T
C
A
G
A
T
18950
A
A
A
T
G
T
C
T
A
T
T
T
A
A
G
T
C
C
T
T
C
A
G
C
C
A
T
T
T
T
T
G
A
A
G
T
G
G
G
A
T
T
T
G
T
G
T
T
G
T
19000
T
G
T
T
G
T
T
G
T
T
G
A
C
C
T
G
T
A
G
G
A
G
T
T
C
T
T
T
A
T
A
T
A
T
T
C
A
G
G
A
T
A
T
T
A
A