Site CDNA-Pos Description Allele1 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000059 00000 ------------ T 1.00 1.00 1.00 1.00 0.95 0.99 C 0.00 0.00 0.00 0.00 0.05 0.01 0000 --- --- --- --- 000424 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 000960 00000 ------------ C 0.97 1.00 1.00 1.00 1.00 0.99 T 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 000994 00000 ------------ C 0.77 0.67 0.84 0.95 1.00 0.87 T 0.23 0.33 0.16 0.05 0.00 0.13 0000 --- --- --- --- 001075 00000 ------------ - 0.00 0.00 0.05 0.02 0.00 0.02 + 1.00 1.00 0.95 0.98 1.00 0.98 0000 --- --- --- --- 001096 00000 ------------ - 0.00 0.04 0.00 0.00 0.00 0.01 + 1.00 0.96 1.00 1.00 1.00 0.99 0000 --- --- --- --- 001440 00000 ------------ G 0.97 1.00 1.00 1.00 1.00 0.99 A 0.03 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001451 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 001575 00000 ------------ G 0.96 0.95 1.00 1.00 1.00 0.99 A 0.04 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 001730 00000 ------------ G 0.93 0.96 1.00 1.00 1.00 0.98 T 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 001884 00000 ------------ C 0.92 0.95 1.00 1.00 1.00 0.98 T 0.08 0.05 0.00 0.00 0.00 0.02 0000 --- --- --- --- 002007 00063 5' UTR T 0.95 1.00 1.00 1.00 1.00 0.99 C 0.05 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 002140 00000 ------------ G 1.00 1.00 1.00 0.97 1.00 0.99 A 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 002334 00000 ------------ C 1.00 1.00 1.00 1.00 0.97 0.99 T 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 002434 00000 ------------ C 1.00 1.00 1.00 0.97 1.00 0.99 T 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 002564 00000 ------------ G 1.00 1.00 1.00 1.00 0.97 0.99 A 0.00 0.00 0.00 0.00 0.03 0.01 0000 --- --- --- --- 002963 00000 ------------ G 0.90 0.75 1.00 1.00 1.00 0.95 A 0.10 0.25 0.00 0.00 0.00 0.05 0000 --- --- --- --- 003105 00000 ------------ A 0.97 0.96 1.00 1.00 1.00 0.99 T 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 003740 00000 ------------ T 0.96 1.00 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 004249 00409 SYNON C 1.00 1.00 0.98 1.00 1.00 0.99 T 0.00 0.00 0.02 0.00 0.00 0.01 0112 AAC AAT ASN(N) ASN(N) 004298 00458 NON-SYN G 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0129 GTC ATC VAL(V) ILE(I) 004520 00508 SYNON A 0.97 0.96 1.00 1.00 1.00 0.99 G 0.03 0.04 0.00 0.00 0.00 0.01 0145 GTA GTG VAL(V) VAL(V) 004536 00524 NON-SYN G 1.00 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.00 0.02 0.00 0.01 0151 GCT ACT ALA(A) THR(T) 004563 00551 NON-SYN T 1.00 1.00 0.98 0.98 1.00 0.99 C 0.00 0.00 0.02 0.02 0.00 0.01 0160 TAC CAC TYR(Y) HIS(H) 004803 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 005077 00644 NON-SYN G 1.00 0.96 0.98 1.00 1.00 0.99 A 0.00 0.04 0.02 0.00 0.00 0.01 0191 GAG AAG GLU(E) LYS(K) 005144 00711 NON-SYN T 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0213 ATC AAC ILE(I) ASN(N) 005196 00763 SYNON C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0230 GCC GCT ALA(A) ALA(A) 006158 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 006177 00000 ------------ A 0.47 0.08 0.73 0.55 0.77 0.57 G 0.53 0.92 0.27 0.45 0.23 0.43 0000 --- --- --- --- 006783 00000 ------------ G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 006968 00907 SYNON C 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0278 ACC ACT THR(T) THR(T) 007074 00000 ------------ G 0.90 0.96 0.91 0.95 1.00 0.95 A 0.10 0.04 0.09 0.05 0.00 0.05 0000 --- --- --- --- 007966 00000 ------------ G 0.93 0.83 0.94 0.95 1.00 0.94 A 0.07 0.17 0.06 0.05 0.00 0.06 0000 --- --- --- --- 009761 00000 ------------ T 0.96 0.96 1.00 1.00 1.00 0.99 G 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009970 00000 ------------ G 0.89 0.75 1.00 1.00 1.00 0.95 T 0.11 0.25 0.00 0.00 0.00 0.05 0000 --- --- --- --- 010228 00000 ------------ G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010348 00000 ------------ G 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010425 01172 NON-SYN C 0.96 1.00 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.00 0.01 0367 CGG TGG ARG(R) TRP(W) 010454 01201 SYNON C 0.86 0.83 1.00 1.00 1.00 0.96 T 0.14 0.17 0.00 0.00 0.00 0.04 0376 CCC CCT PRO(P) PRO(P) 010764 00000 ------------ T 0.96 0.95 1.00 1.00 1.00 0.99 A 0.04 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- 010782 00000 ------------ T 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 011962 01297 SYNON G 1.00 1.00 1.00 0.95 1.00 0.99 A 0.00 0.00 0.00 0.05 0.00 0.01 0408 GCG GCA ALA(A) ALA(A) 012261 00000 ------------ G 0.97 0.96 1.00 1.00 1.00 0.99 A 0.03 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 012414 00000 ------------ G 0.43 0.08 0.73 0.52 0.77 0.56 A 0.57 0.92 0.27 0.48 0.23 0.44 0000 --- --- --- --- 012415 00000 ------------ A 0.43 0.08 0.73 0.52 0.77 0.56 G 0.57 0.92 0.27 0.48 0.23 0.44 0000 --- --- --- --- 012416 00000 ------------ C 0.43 0.08 0.73 0.52 0.77 0.56 T 0.57 0.92 0.27 0.48 0.23 0.44 0000 --- --- --- --- 012417 00000 ------------ C 0.43 0.08 0.73 0.52 0.77 0.56 T 0.57 0.92 0.27 0.48 0.23 0.44 0000 --- --- --- --- 012418 00000 ------------ C 0.43 0.08 0.73 0.52 0.77 0.56 T 0.57 0.92 0.27 0.48 0.23 0.44 0000 --- --- --- --- 012419 00000 ------------ A 0.43 0.08 0.73 0.52 0.77 0.56 T 0.57 0.92 0.27 0.48 0.23 0.44 0000 --- --- --- --- 012420 00000 ------------ G 0.43 0.08 0.73 0.52 0.77 0.56 A 0.57 0.92 0.27 0.48 0.23 0.44 0000 --- --- --- --- 013160 01459 SYNON C 1.00 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.00 0.02 0.00 0.01 0462 GCC GCG ALA(A) ALA(A) 013348 00000 ------------ C 1.00 1.00 1.00 0.97 1.00 0.99 T 0.00 0.00 0.00 0.03 0.00 0.01 0000 --- --- --- --- 013349 00000 ------------ G 0.93 0.96 1.00 1.00 1.00 0.98 A 0.07 0.04 0.00 0.00 0.00 0.02 0000 --- --- --- --- 013600 01630 SYNON A 1.00 0.96 1.00 1.00 1.00 0.99 G 0.00 0.04 0.00 0.00 0.00 0.01 0519 CAA CAG GLN(Q) GLN(Q) 013611 01641 NON-SYN C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0523 GCG GTG ALA(A) VAL(V) 013645 01675 SYNON G 1.00 1.00 0.95 0.70 0.93 0.90 A 0.00 0.00 0.05 0.30 0.07 0.10 0534 CGG CGA ARG(R) ARG(R) 013706 01736 NON-SYN A 0.93 1.00 1.00 1.00 1.00 0.99 G 0.07 0.00 0.00 0.00 0.00 0.01 0555 ATA GTA ILE(I) VAL(V) 014187 02217 3' UTR - 0.00 0.00 0.00 0.00 0.02 0.01 + 1.00 1.00 1.00 1.00 0.98 0.99 0000 --- --- --- --- 014401 02431 3' UTR G 1.00 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 014459 02489 3' UTR G 1.00 0.96 1.00 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014721 02751 3' UTR C 0.89 0.96 0.91 0.95 1.00 0.95 T 0.11 0.04 0.09 0.05 0.00 0.05 0000 --- --- --- --- 014874 02904 3' UTR G 1.00 0.96 1.00 1.00 1.00 0.99 T 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 014953 02983 3' UTR C 0.93 0.96 0.91 0.95 1.00 0.95 T 0.07 0.04 0.09 0.05 0.00 0.05 0000 --- --- --- --- 014985 03015 3' UTR C 1.00 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 014986 03016 3' UTR G 1.00 1.00 0.98 1.00 1.00 0.99 A 0.00 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 014999 03029 3' UTR C 1.00 1.00 0.98 0.98 1.00 0.99 A 0.00 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 015026 03056 3' UTR G 1.00 1.00 1.00 0.95 1.00 0.99 A 0.00 0.00 0.00 0.05 0.00 0.01 0000 --- --- --- --- 015264 03294 3' UTR C 0.96 0.96 1.00 1.00 1.00 0.99 T 0.04 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015459 03489 3' UTR C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 015603 03633 3' UTR T 1.00 1.00 0.95 0.64 0.77 0.85 C 0.00 0.00 0.05 0.36 0.23 0.15 0000 --- --- --- --- 015693 03723 3' UTR C 0.96 1.00 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 015810 03840 3' UTR C 1.00 1.00 0.95 0.64 0.77 0.85 T 0.00 0.00 0.05 0.36 0.23 0.15 0000 --- --- --- --- 016056 00000 ------------ T 0.93 1.00 1.00 1.00 1.00 0.99 C 0.07 0.00 0.00 0.00 0.00 0.01 0000 --- --- --- --- 016116 00000 ------------ T 1.00 0.96 1.00 1.00 1.00 0.99 C 0.00 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 016256 00000 ------------ C 1.00 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 016920 00000 ------------ C 1.00 1.00 0.93 1.00 1.00 0.98 T 0.00 0.00 0.07 0.00 0.00 0.02 0000 --- --- --- --- 017104 00000 ------------ C 1.00 0.95 0.97 0.65 0.76 0.84 T 0.00 0.05 0.03 0.35 0.24 0.16 0000 --- --- --- --- 017421 00000 ------------ C 1.00 0.77 0.95 0.95 1.00 0.94 T 0.00 0.23 0.05 0.05 0.00 0.06 0000 --- --- --- --- 017465 00000 ------------ C 1.00 0.91 1.00 1.00 1.00 0.99 T 0.00 0.09 0.00 0.00 0.00 0.01 0000 --- --- --- --- 017556 00000 ------------ C 1.00 1.00 0.95 0.95 1.00 0.98 T 0.00 0.00 0.05 0.05 0.00 0.02 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001075: CCTC 001096: CTCT 014187: CT