CD4 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
TTTACTTAAG AATGCCCTTA ATGA
G
G
C
C
G
G
G
C
G
C
A
G
T
G
G
C
T
C
G
T
G
C
C
T
G
T
50 |
REPEAT
A
A
T
C
C
C
A
G
C
A
C
T
T
T
G
G
G
A
G
G
C
C
G
A
A
G
C
G
G
G
C
A
G
A
T
C
A
G
G
A
T
C
A
C
C
T
G
A
G
G
100
T
C
A
G
G
A
G
T
T
C
A
A
G
A
C
C
A
G
C
C
T
G
G
C
C
A
A
C
G
A
G
T
G
A
A
A
C
C
C
T
G
T
C
T
C
T
A
C
A
A
150
A
A
A
T
A
C
A
A
A
A
A
T
T
A
G
C
C
A
G
G
C
A
T
G
T
T
G
G
C
G
G
G
T
G
C
C
T
G
T
A
A
T
C
C
C
A
G
C
T
A
200
C
T
C
G
G
G
A
G
G
C
T
G
A
G
G
C
A
G
G
A
G
A
A
T
G
G
C
T
T
G
A
A
T
C
C
A
G
G
A
G
G
C
G
G
A
G
G
T
T
G
250 |
var(214):[A:0.05]
T
A
G
T
A
A
G
C
C
G
A
A
A
T
C
A
T
G
C
T
G
C
T
G
C
A
C
T
T
C
A
G
C
C
T
G
G
A
T
G
A
C
A
A
A
G
C
A
A
G
300
A
C
T
C
T
G
T
C
T
C
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
G
A
G
A
G
A
T
C
A
A
G
A
C
C
A
T
C
C
T
G
350 |
REPEAT
|
NOT SCANNED
G
G
C
A
A
C
A
T
G
G
T
G
A
A
A
C
C
C
C
A
T
C
T
C
T
A
C
T
A
A
A
G
A
T
A
C
A
A
A
A
A
T
T
A
G
C
T
G
G
G
400
C
A
T
T
G
T
G
G
C
G
C
A
T
G
C
C
T
G
T
A
G
C
C
C
C
A
G
C
T
A
C
T
T
G
G
G
A
G
G
C
T
G
A
G
G
C
A
G
G
A
450
G
A
A
T
T
G
C
T
T
G
A
A
C
C
C
G
G
G
A
G
G
C
A
G
A
G
G
T
T
G
C
A
G
T
G
A
G
C
C
A
A
G
A
T
C
A
C
G
C
C
500
A
C
T
G
C
A
C
T
C
T
A
G
C
C
T
G
G
G
C
A
A
C
A
G
A
G
T
G
A
G
A
C
T
C
C
C
T
C
T
C
A
A
A
A
A
A
A
A
A
A
550
A
A
A
A
A
A
A
A
A
A
A
T
A
T
A
T
A
T
A
T
A
T
A
T
A
T
A
T
A
T
A
G
A
A
T
G
C
C
T
T
T
A
A
T
G
A
A
G
C
A
600 |
REPEAT
G
T
A
A
A
T
A
C
T
A
A
T
T
T
T
A
T
T
A
A
A
T
C
T
C
A
A
C
C
C
T
T
G
A
G
T
A
C
G
G
T
G
T
G
T
C
A
T
G
A
650
A
A
T
G
A
G
A
A
G
T
A
G
C
A
C
A
C
A
G
T
A
C
T
A
T
A
T
G
C
T
A
C
A
G
A
T
G
A
A
G
T
A
C
A
A
T
G
C
T
G
700
T
C
A
A
A
T
A
G
G
G
G
T
A
C
T
T
G
T
G
T
T
A
A
T
T
G
T
T
G
G
A
G
T
C
G
C
A
A
G
C
T
G
A
A
C
T
A
G
A
G
750
T
T
T
T
C
T
T
T
T
C
T
T
T
T
C
T
T
T
T
C
T
T
T
T
C
T
T
C
T
T
T
T
C
A
A
G
A
C
A
G
G
T
T
C
T
C
A
C
T
C
800 |
REPEAT
T
G
T
C
A
C
T
C
A
G
G
C
T
A
G
A
G
T
G
C
A
G
T
G
G
T
G
C
A
A
T
C
A
C
G
G
T
T
C
A
C
T
G
C
A
G
C
C
T
C
850
A
A
C
T
T
C
C
T
G
G
G
C
T
C
A
A
G
C
G
A
T
C
C
T
C
C
C
A
C
C
T
C
G
G
C
C
T
C
C
T
A
A
A
A
T
G
C
T
G
G
900 |
var(874):[C:0.41]
G
A
T
T
A
T
A
G
G
C
A
T
G
A
G
C
C
A
C
C
A
C
T
C
C
C
A
G
C
C CCACTTTTTT CAGACTGGAA
950
AACGCACACT CACATGTGCA TCTTTAAATG ATCACTTGGG CTGTGGTAT
G
1000 |
REPEAT
G
A
G
A
A
T
G
G
C
G
A
C
C
A
G
T
G
A
G
G
A
G
G
C
A
G
G
A
G
C
T
G
T
T
G
T
C
C
G
A
G
C
A
A
G
G
G
A
T
G
1050
A
T
A
T
T
G
G
C
A
T
C
T
T
G
G
A
T
T
G
G
C
A
T
G
G
T
G
G
C
A
G
T
A
G
T
G
G
T
A
G
T
G
C
A
G
A
G
T
G
A
1100
C
T
T
G
G
G
T
A
G
A
T
T
T
T
G
G
A
G
C
C
A
T
T
T
A
G
A
A
G
G
T
A
A
C
A
T
C
C
A
C
A
G
G
A
A
C
T
G
G
T
1150
A
A
A
T
A
A
A
T
A
C
G
T
G
G
G
A
G
A
A
G
T
T
G
G
G
T
G
A
A
G
G
G
G
G
T
G
T
C
A
A
A
G
A
T
T
A
C
A
C
C
1200
C
A
A
T
T
T
A
T
T
T
T
G
C
T
T
G
G
G
C
A
A
G
T
T
G
G
T
G
G
A
T
G
G
T
G
A
G
C
C
C
C
T
C
A
C
T
G
A
G
T
1250
G
A
G
A
A
G
C
C
T
G
G
A
G
A
A
G
C
A
G
G
T
T
T
G
G
A
G
G
G
T
G
G
T
A
G
T
A
T
G
C
A
G
G
T
G
G
T
A
T
G
1300
C
A
T
A
G
T
T
G
G
G
G
A
T
G
T
G
T
G
T
T
G
A
G
T
T
T
G
C
T
A
T
G
T
C
C
G
G
T
G
A
G
C
T
T
C
C
C
A
G
T
1350 |
var(1306):[C:0.06]
G
G
A
G
A
T
G
T
C
C
A
A
T
G
G
G
C
A
G
A
C
G
G
A
T
A
C
T
C
A
C
A
T
A
G
A
G
A
G
T
T
C
A
T
G
G
T
A
G
A
1400
T
T
C
G
G
G
C
T
A
G
A
G
GAAAGCAC CTGAGGCCTG GCCAGAGACG CCTAGAGGAA
1450 |
var(1403):[T:0.01]
|
var(1404):[C:0.22]
CAGAGCCTGG TTAACAGTCA CTCCTGGTGT CTCAGATATT CTCTGCTCAG
1500
CCCACGCCCT CTCTTCCACA CTGGGCCACC TATAAAGCCT CCACAGATAC
1550
CCCTGGGGCA CCCACTGGAC ACATGCCCTC AGGGCCCCAG AGCAAGGAGC
1600
TGTTTGTGGG CTT
A
CCACTG CTGTTCCCAT ATGCCCCCAA CTGCCTCCCA
1650 |
var(1614):[G:0.21]
CTTCTTTCCC CACAGCCTGG TCAGACATGG C
A
CTACCACT AATGGAATCT
1700 |
var(1682):[G:0.26]
TTCTTGCCAT CTTTTTCTTG CCGCTTAACA GTGGCAGTGA CAGTTTGACT
1750
CCTGATTTAA GCCTGATTCT GCTTAACTTT TTCCCTTGAC TTTGGCATTT
1800
TCACTTTGAC ATGTTCCCTG AGAGCCTGGG GGGTGGGGAA CCCAGCTCCA
1850
GCTGGTGACG TTTGGGGCCG GCCCAGGCCT AGGGTGTGGA GGAGCCTTGC
1900
CATCGGGCTT CCTGTCTCTC TTCATTTAAG CACGACTCTG CAGAAGGAAC
1950
AAAGCACCCT CCCCA
C
T
G
G
G
C
T
C
C
T
G
G
T
T
G
C
A
G
A
G
C
T
C
C
A
A
G
T
C
C
T
C
A
C
A
2000 | Exon 1 |
UTR
C
A
G
A
T
A
C
G
C
C
T
G
T
T
T
G
A
G
A
A
G
C
A
G
C
G
G
G
C
A
A
G
A
A
A
G
A
C
G
C
A
A
G
C
C
C
A
G
A
G
2050
GTAAGGTGGT CAGACTCGGC TTCCTTCCCC GGAGCTGAGA GGGAGGGGAA
2100
CGTGGGGCAG ATGCACAGGA ATGTGCTCTG CCCAGTTGTC TGCCCACAGC
2150
TCTGGCCACC TTCTCTTGCA TTTCTCTTGG AACTGGTCAT GAGCAGCGA
T
2200 |
REPEAT
T
T
C
C
C
A
C
T
G
G
A
A
C
T
G
T
G
A
G
C
T
T
C
C
A
G
A
G
G
T
C
A
G
A
G
A
C
T
G
T
G
C
T
A
G
A
C
T
C
C
2250 |
var(2250):[T:0.02]
T
C
T
C
T
G
C
A
G
C
C
C
C
A
G
C
G
T
G
C
A
C
A
G
C
T
C
A
G
T
G
T
C
C
A
G
A
G
C
A
A
T
G
G
G
T
G
C
T
C
2300 |
var(2278):[G:0.04]
CTTAGAGGAG TAGTGACCTA AATAGCAAGA TCAGAGAGGG AGTGAAGACT
2350
GGAGACTATC CCAGGCTGGG AAAGGCGTGG AAGGCAACTA GTCGTGGGCA
2400
GT
G
GAGG
G
GA GAAGACTGGA AGAGGGGAAA AGAGGAGAAA AAG
A
GTGAAG
2450 |
var(2403):[T:0.25]
|
var(2408):[C:0.06]
|
var(2444):[G:0.02]
AAGGGGAGGG AAAAAATTAG AAAGAATAAA TAAATATAAG GTGGGAGGAA
2500
ACCTATAAAA AAGAAATGAT GAGGAAAAAC
G
ATAAAAACA AGAAAAAGAG
2550 |
var(2531):[:0.45]
CAAAAGAAGT GGAATCTAGT CTAGAGAAAA TTCTTGCAAA ACCAATTTTC
2600
CTAACGGGAC AATCTCCAAA AATTGACACC AAATATCATA CTTGCAGCAT
2650
TTCATAAGTC GCATGATCTA TGTAATAGTC TCTTTTAAC
T
A
C
C
T
T
T
T
G
T
G
2700 |
NOT SCANNED
T
T
T
C
T
G
T
G
T
G
T
A
T
T
T
T
T
A
A
A
T
T
T
T
T
G
T
C
T
G
C
T
T
C
T
T
T
G
C
T
C
T
T
T
T
A
A
G
A
T
2750
T
T
T
T
G
A
A
C
A
A
T
G
T
C
T
A
A
A
G
G
C
A
C
T
T
C
T
A
C
T
C
T
A
G
T
T
A
G
C
T
T
T
A
A
A
A
T
G
A
T
2800
T
C
A
T
G
A
A
A
T
A
G
G
A
A
A
G
C
T
A
A
A
A
T
T
C
T
C
A
G
A
A
A
G
T
G
T
T
G
A
A
A
C
T
G
A
G
C
T
T
T
2850
T
G
C
G
T
A
T
G
A
A
T
T
G
C
C
C
T
A
A
A
A
G
T
T
G
C
A
G
A
T
A
C
A
T
A
T
C
T
T
T
A
G
A
T
A
A
A
T
A
T
2900
G
T
C
A
T
T
T
A
A
G
A
A
A
C
G
G
A
T
T
C
G
A
A
A
A
G
A
A
T
T
G
G
T
G
G
T
A
G
G
G
G
T
C
T
C
A
T
G
A
G
2950
G
C
C
G
G
G
A
G
A
G
T
T
A
C
A
G
A
A
G
G
A
T
G
T
G
C
A
G
C
C
C
C
T
C
C
T
G
G
G
C
C
T
G
G
C
A
G
G
G
T
3000
G
T
G
A
G
G
G
A
G
A
G
T
G
A
G
G
A
C
T
C
A
C
T
G
T
C
C
C
T
C
C
T
G
A
A
G
G
G
A
A
G
C
C
C
T
G
T
G
C
C
3050
A
T
C
T
C
A
G
C
C
T
T
T
C
C
G
C
C
C
T
C
A
G
A
C
C
T
T
T
C
C
A
G
C
C
C
C
T
G
A
G
A
C
C
T
C
A
T
G
G
C
3100
C
T
T
G
A
A
G
C
C
G
T
G
C
T
A
T
C
C
C
C
A
G
T
G
T
C
C
T
C
T
G
C
T
T
T
C
C
C
C
T
C
A
T
A
G
G
C
T
T
C
3150
T
T
C
T
G
G
G
A
G
A
G
A
G
G
T
T
T
C
C
T
G
G
G
G
T
A
C
G
T
T
C
T
G
A
T
C
C
C
T
C
A
A
A
A
C
G
G
A
A
A
3200
G
G
C
C
C
T
G
T
T
C
T
C
A
A
T
A
A
T
T
C
A
A
A
G
A
T
T
T
C
A
C
T
C
T
G
A
G
T
G
G
G
A
T
A
G
TGCTT
3250
CCTGAATGCC CTGCTCTTGT GGTGGACATT TTTATCGGGG CAAGGCTAAG
3300
AGCAGGGCCT GATGGGGGAA GTCACTGC
T
A CTTCACATTT TGACCAATAA
3350 |
var(3329):[C:0.01]
TTCCTTGTGC TGTATCAGAT GCTGTAGGCT GATACAAAAT GGCCGCCGCC
3400
CTCAAAGTCA GATGAAAGAG CCCCTGAGGA CAGCGTTAGA GACACTCGGG
3450
AGATGATTTC CCTCTTTCAA TGTGGGAGCA CTTACATAGG AGAGGTCTAT
3500
ATCTAGATAA AAACTCCTCC CACCACTGGT GCTAGACAGA GCTTGGGGGC
3550
AGCCCTAGGC TCTGACCCTG GCCGTAATGG CGGGGTGGTG CTGA
G
GGCAA
3600 |
var(3595):[A:0.01]
TTGGCTAGAC CAATTGTCTT GCACG
T
T
T
T
A
T
T
T
T
T
T
A
T
T
A
T
T
A
T
T
T
T
T
G
A
3650 |
REPEAT
G
A
C
G
G
A
G
T
C
T
C
G
C
T
C
T
C
T
T
G
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
A
T
G
A
C
G
T
G
A
T
C
T
C
C
3700
A
C
T
C
A
C
T
G
C
A
G
C
C
T
C
C
A
C
C
T
C
C
T
G
G
G
T
T
C
A
A
G
C
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
3750
C
T
C
T
T
G
A
G
T
A
G
C
T
G
G
G
A
T
T
A
C
A
G
G
A
G
C
C
C
A
A
C
A
C
C
A
C
G
C
C
C
G
G
C
T
A
C
T
T
T
3800 |
NOT SCANNED
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
G
A
C
C
A
G
G
T
T
T
C
A
C
T
A
T
G
T
T
G
G
A
C
A
G
G
C
T
G
G
C
C
T
C
3850
A
A
A
C
T
C
C
T
G
G
C
C
T
C
A
A
A
T
G
A
T
C
C
G
C
C
C
G
C
C
T
T
G
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
3900
C
A
T
T
A
C
A
G
A
C
G
T
G
A
G
C
C
A
C
C
A
T
A
C
T
G
G
G
C
C
A
G
T
C
T
T
G
C
A
C
A
T
T
T
T
A
G
A
C
A
3950 |
REPEAT
C
T
C
A
A
T
A
A
A
T
G
T
T
T
G
T
T
G
A
A
T
G
A
A
ATACCT GTGATG
G
G
C
C
G
G
G
C
G
T
G
G
T
G
4000 |
REPEAT
G
C
C
C
A
C
A
C
C
A
G
T
A
A
T
C
C
C
A
G
C
C
C
T
T
T
G
A
G
A
G
G
C
C
G
A
G
G
C
A
G
G
A
G
G
A
T
G
G
C
4050 |
var(4017):[T:0.02]
T
T
G
A
A
C
C
T
G
G
G
A
G
T
T
T
G
A
G
A
C
C
A
G
C
C
T
G
G
G
C
A
A
C
A
T
G
G
T
G
A
A
A
C
C
C
C
C
A
T
4100
C
T
C
T
A
C
A
A
A
C
C
C
C
A
C
A
A
A
A
G
T
T
A
G
C
T
G
G
G
C
A
T
G
G
T
A
G
T
G
T
G
T
G
C
C
T
G
T
G
G
4150 |
var(4110):[T:0.03]
T
T
C
C
A
G
C
T
A
C
T
T
G
G
G
A
A
G
C
T
G
A
G
G
T
G
G
G
A
G
G
A
T
T
G
C
T
T
G
A
G
C
C
T
G
G
G
A
G
A
4200
C
G
G
A
G
G
C
T
G
C
A
G
T
G
A
G
G
C
C
T
G
A
C
T
G
T
G
C
C
A
C
T
G
C
A
C
T
C
C
A
G
C
C
T
G
G
G
C
G
A
4250
G
A
G
T
G
A
G
G
C
C
C
T
G
T
C
T
C
A
A
A
A
T
A
A
CTTTGA TGAAGGTGGG GAATCAGA
G
G
4300 |
var(4299):[A:0.37]
TAG
A
TGGGCA GGGGTCTGGG TTTGCAAGGC TCTGAGTTTG AGCTCTGTTC
4350 |
var(4304):[G:0.25]
T
G
TAC
C
TTTG AGGGGATGAG GGAAGGAGGG TGGGCACGGT TCCCCCGATG
4400 |
var(4352):[A:0.01]
|
var(4356):[T:0.23]
TGGGTGTCTG AGGCGAAGAA GAGGATGGCG GAGGTTGCAG CCACCAACCA
4450
CAAGAGTTCC TTAGAGGGGT CACAGTCTCT AGGAAGTTTA TAGGAAGCTA
4500
GTCAGCAGTA GAGAGGGTGA ACGCGGTGGG GCACATCCCG CGGCTGGGCT
4550
TGAGTGGGCT GCTTGGGGGT TATGGGGAGA AGATAAAAGT GCCTGTGGGA
4600
CCACAGACTC TCGCTGTGGT GGAGCTGGGC CCTCTTACCC TCCCAAGCCT
4650
CGCCCCTCAT CCCATCCCTG GGGGCCAGGG GTGAGGGCGG CAGGAACCTC
4700
AAGGCTCTGA GAAAGTGCGT GGTGTGTGTT GCCATTTTGG TCTCTTCTCT
4750
TTCTCAGT
C
T CTCTTTGCCT CACTTTGGAT CTATGCTCTG TGCATCTGTC
4800 |
var(4759):[T:0.01]
TTGCTTCTCA GAATTTCTTC TTTTCCTCTT TTTTTGTACT ACCCTGCGCT
4850
TTGTGTGTGA TTGTGGATTG TGTGTGCATA GCTGTTGCTT TAACA
A
GCTG
4900 |
var(4896):[G:0.04]
CTCCAGGTCT CTCTCTCCCA CATCTTTCCC TCCCCTCCTC CCTTGAGGCT
4950
CTGTGCATTC TGGGGAACTC TGTCCATTTC CCTTTGTCCA TGTGTCCCTC
5000
C
CACCCTGCA GCCGGCTCCC TCACATCCAC CCTGGGCTGC AGGCGTGCTC
5050 |
var(5001):[T:0.01]
GGCA
G
G
C
T
C
C
C
C
A
C
A
G
A
T
C
A
A
A
G
C
T
T
G
T
C
C
A
G
G
G
T
C
T
G
C
A
T
T
G
C
T
G
C
C
A
A
5100 |
NOT SCANNED
A
G
G
C
C
A
G
G
A
G
G
A
C
T
G
T
G
T
A
C
A
G
A
C
C
G
G
A
A
G
G
A
G
C
T
A
G
A
G
C
T
T
A
G
T
G
G
C
A
G
5150
C
C
T
G
A
G
A
G
G
G
G
A
A
G
C
T
G
A
A
A
A
A
G
G
A
G
A
A
G
A
G
G
C
A
A
G
G
G
G
C
A
T
T
C
C
A
G
G
G
G
5200
A
G
C
C
C
G
G
G
A
G
A
G
C
C
A
G
C
A
C
G
G
C
C
G
C
C
T
G
G
T
A
T
A
T
G
A
G
G
C
A
A
A
G
A
G
G
A
A
G
A
5250
C
A
G
A
C
A
C
A
G
A
C
A
C
A
G
G
G
A
G
C
T
G
C
A
G
G
C
T
G
G
G
G
G
C
A
T
A
A
G
C
T
G
G
G
G
G
C
T
G
G
5300
G
A
A
G
C
A
T
A
G
A
T
A
C
A
G
A
A
A
T
G
C
A
C
A
G
A
T
G
T
G
A
G
C
T
G
A
G
A
A
G
C
A
A
G
G
A
G
G
G
A
5350
G
A
G
A
G
A
G
A
G
A
C
A
G
A
A
A
G
A
G
A
G
A
G
A
G
A
G
A
C
G
T
G
C
C
A
G
G
G
C
T
T
G
A
G
G
G
A
C
C
A
5400
G
A
G
A
G
C
C
C
T
C
C
C
A
G
C
C
T
C
T
C
T
C
G
G
A
G
T
G
C
T
G
G
T
A
T
A
C
A
G
G
A
T
G
C
T
A
C
C
G
T
5450
A
C
T
A
G
G
G
T
A
A
G
A
C
A
C
C
T
C
T
G
G
G
G
G
C
G
C
T
G
A
G
T
A
T
G
G
G
A
A
T
C
A
A
A
G
G
C
C
A
G
5500
A
T
C
T
C
T
G
G
G
G
T
G
G
C
A
G
C
G
G
A
A
G
C
C
C
A
A
A
G
C
A
C
C
A
A
A
G
C
A
A
G
C
A
T
G
C
T
G
G
A
5550
A
A
C
C
C
A
C
A
G
C
C
T
C
C
T
C
C
A
C
T
T
A
G
C
A
G
A
G
C
C
T
T
G
G
G
G
T
G
A
G
A
T
G
A
G
G
C
A
G
A
5600
A
C
A
G
G
G
A
G
C
T
G
G
A
G
G
C
A
G
G
G
A
G
G
T
G
G
C
T
G
T
C
T
G
C
A
C
A
T
A
C
C
T
C
A
G
G
A
C
C
A
5650
T
G
G
A
G
C
T
G
G
G
G
G
A
G
T
C
A
A
A
A
C
A
G
C
C
A
C
C
A
T
A
T
G
G
G
G
A
A
G
G
G
T
C
A
A
G
A
A
T
G
5700
C
C
T
C
T
A
G
T
C
T
T
C
C
C
C
A
G
G
C
A
T
C
T
T
A
T
C
A
G
G
G
T
A
A
G
C
T
G
A
A
T
T
T
G
G
A
C
C
C
C
5750
A
G
A
G
A
A
G
G
G
A
T
A
T
C
G
T
T
T
A
T
G
G
A
G
A
C
T
T
C
C
C
C
T
C
T
T
T
C
A
T
C
C
C
C
T
G
C
T
C
A
5800
C
C
A
A
G
G
A
C
C
C
A
G
T
C
A
G
T
C
T
G
G
G
A
T
G
G
G
G
G
A
C
A
G
T
G
G
G
A
A
C
C
A
C
T
C
T
T
T
G
G
5850
T
A
T
G
A
G
G
C
T
A
C
T
C
C
T
A
T
T
C
T
A
C
T
C
T
T
C
T
C
A
C
T
G
C
A
G
C
C
T
T
C
C
C
C
T
A
G
A
T
G
5900
C
C
T
C
C
C
A
T
C
T
G
C
A
T
G
C
T
A
A
C
C
T
G
T
A
A
A
C
A
C
T
T
C
A
C
C
A
T
C
A
C
T
G
G
T
G
G
C
T
A
5950
G
T
C
T
C
C
C
T
T
C
C
T
C
C
T
T
T
T
T
C
A
G
A
A
A
C
C
T
C
C
T
T
C
C
T
G
A
C
C
T
C
T
T
T
T
C
T
T
C
C
6000
T
A
C
T
T
C
C
C
C
G
G
T
T
T
A
A
A
C
A
A
A
A
T
T
G
T
A
T
C
T
A
T
C
T
A
T
C
A
T
C
T
A
T
C
T
A
T
C
T
A
6050
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
T
T
T
T
T
T
T
6100 |
REPEAT
T
T
T
T
G
A
G
A
C
A
A
A
A
T
C
T
C
A
C
T
C
T
G
T
C
G
C
C
C
A
G
G
C
T
G
T
A
G
T
G
C
A
G
T
G
G
C
A
C
T
6150
A
C
A
A
G
T
A
A
T
C
C
C
A
A
G
T
A
G
C
T
G
A
G
A
T
T
A
C
A
G
G
C
G
C
C
C
G
C
C
A
C
C
A
T
C
C
C
C
A
G
6200
C
T
A
A
T
T
T
T
T
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
C
A
C
G
G
G
G
G
T
T
T
C
A
T
G
A
T
G
T
T
G
G
C
C
A
6250
G
G
C
T
G
G
T
C
T
C
A
A
A
C
T
C
C
T
G
G
C
C
T
C
A
A
G
T
G
A
T
C
T
G
C
C
T
G
C
C
T
C
G
G
C
C
T
C
C
C
6300
A
A
G
G
T
G
C
T
G
G
A
T
T
A
T
A
G
G
T
A
T
G
A
G
C
C
A
C
C
A
C
A
C
A
C
G
A
C
A
C
C
C
G
G
C
T
T
C
T
A
6350
T
C
T
A
T
C
T
A
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
A
C
C
T
A
T
6400
C
T
A
T
C
T
A
A
T
C
T
A
T
C
T
A
T
A
T
C
T
G
T
C
T
A
T
C
T
A
T
C
T
T
T
A
T
G
T
A
T
C
T
A
T
C
T
T
A
T
6450
C
T
A
T
T
G
A
T
C
T
A
T
C
T
A
T
C
T
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
A
C
A
G
A
G
T
C
A
C
T
C
T
G
T
C
A
6500 |
REPEAT
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
C
A
C
G
A
T
C
T
C
G
G
C
T
C
A
C
T
G
C
A
A
C
C
T
C
C
G
C
C
T
6550
C
C
C
G
G
G
T
T
C
A
A
G
C
G
A
T
T
C
T
C
C
T
A
C
C
T
C
A
G
C
C
T
C
C
T
C
A
G
T
A
G
C
T
G
G
G
A
C
T
A
6600
C
C
C
A
C
C
A
C
C
A
C
T
C
C
T
G
G
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
T
C
A
G
T
A
G
A
G
A
T
A
G
G
G
T
T
T
6650
C
A
C
T
A
T
G
T
T
G
G
C
C
A
G
G
C
T
G
G
T
C
T
C
C
A
A
C
T
C
C
T
G
A
C
C
T
A
A
A
G
T
G
A
T
C
C
A
C
C
6700
C
A
C
C
T
T
G
G
T
T
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
T
G
A
G
C
C
A
C
C
G
T
G
C
C
T
6750
G
G
A
C
A
T
A
T
A
T
C
T
A
T
C
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
A
T
G
G
A
G
T
C
T
C
G
C
T
C
T
G
T
T
G
C
6800 |
REPEAT
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
C
G
T
G
A
T
T
T
C
G
G
C
T
C
A
C
T
G
C
A
A
C
C
T
C
C
G
C
C
T
C
6850
C
C
G
G
G
T
T
C
A
A
G
T
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
C
A
A
G
T
A
G
C
T
G
A
G
A
T
T
A
C
6900
A
G
A
C
G
T
G
C
G
T
C
A
C
C
A
T
G
C
C
C
A
G
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
G
A
T
G
G
6950
G
A
T
T
T
C
A
C
T
A
T
G
T
T
G
G
C
C
A
G
G
C
T
G
G
T
C
T
C
G
T
A
C
T
C
C
C
G
A
C
C
T
C
A
G
G
T
G
A
T
7000
C
C
A
C
T
T
G
C
C
T
T
G
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
A
A
T
T
A
C
A
G
G
T
G
T
G
A
G
C
C
A
C
T
G
7050
C
A
T
C
C
G
G
C
C
T
T
A
T
A
T
A
T
C
T
A
T
C
T
T
G
T
C
T
G
T
C
T
G
A
C
T
G
T
C
T
A
A
T
C
T
A
A
T
T
C
7100
A
T
C
T
A
T
T
T
T
A
T
C
T
G
T
T
T
A
T
C
T
T
A
T
C
T
A
T
C
A
T
C
T
A
T
T
T
A
T
C
T
A
A
T
C
T
A
T
C
T
7150
G
T
C
T
G
T
A
T
G
T
C
T
G
T
T
T
T
T
T
T
T
T
T
G
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
A
T
A
G
A
G
T
7200 |
REPEAT
C
T
T
G
C
T
C
T
G
T
C
G
C
C
G
A
G
G
C
T
G
G
A
G
T
G
C
G
G
T
G
G
C
G
C
G
A
T
C
T
C
A
G
C
T
C
A
C
T
G
7250
C
T
G
A
A
C
C
T
C
C
G
C
C
T
C
C
T
G
G
G
T
T
C
T
A
A
G
C
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
A
T
C
T
T
T
G
7300
G
A
G
T
A
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
C
C
G
T
A
C
C
A
C
T
G
T
G
C
C
C
G
G
C
T
A
A
T
T
T
T
G
T
A
T
7350
T
T
T
T
A
G
T
A
G
A
G
A
A
G
G
G
T
T
T
C
A
C
C
A
T
G
T
T
G
G
T
C
A
G
G
C
T
T
G
T
A
T
T
G
A
A
C
T
C
C
7400
T
G
A
C
C
T
C
A
G
G
T
G
A
T
C
T
A
C
C
C
G
C
C
T
A
A
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
G
T
A
C
A
7450
G
G
T
G
T
G
A
G
C
C
A
C
T
G
T
G
T
C
T
G
T
C
C
C
T
A
A
A
T
G
T
C
T
G
T
C
T
C
T
A
T
C
T
A
T
C
T
A
T
C
7500
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
A
A
T
C
T
A
T
C
T
T
T
C
T
G
T
C
T
A
A
C
C
T
A
A
T
7550
C
T
A
T
T
T
T
A
T
C
T
A
T
C
T
T
A
T
T
C
A
T
C
A
T
C
T
A
T
C
T
A
A
T
C
T
G
T
C
T
G
T
A
T
G
T
T
T
A
T
7600
C
T
A
A
T
C
T
A
T
T
T
A
C
C
T
A
A
T
C
T
A
T
C
A
A
T
C
T
A
T
C
A
T
C
T
A
A
T
C
T
A
T
C
T
A
A
T
C
T
G
7650
T
C
T
A
T
C
T
A
A
T
C
T
A
T
T
T
T
A
T
C
T
A
T
C
T
A
T
C
T
A
T
C
T
G
T
C
C
A
T
C
C
A
T
C
T
A
T
C
T
A
7700
C
C
T
A
C
C
T
G
T
C
T
A
T
C
T
C
A
A
G
C
A
C
C
T
A
C
C
A
C
G
T
A
T
T
A
A
G
C
C
C
T
G
G
C
T
A
C
C
T
C
7750
C
T
C
T
T
C
C
A
G
G
C
A
G
A
T
G
G
A
G
T
A
A
C
T
G
G
A
G
G
C
A
G
C
T
A
A
C
A
A
A
G
A
T
G
G
A
G
T
C
A
7800
C
T
T
T
T
C
T
T
A
T
C
T
T
C
T
C
C
T
A
A
A
C
C
A
C
C
G
T
A
A
G
A
G
G
A
C
C
A
A
G
C
C
C
C
C
A
C
A
C
C
7850
T
T
C
T
G
A
G
T
G
C
C
C
C
A
T
T
C
C
T
C
T
C
C
A
C
A
G
A
T
T
G
T
G
T
C
T
T
A
G
T
G
C
C
C
A
G
C
A
G
G
7900 |
REPEAT
A
A
A
C
A
C
A
G
T
C
C
A
C
C
T
C
C
C
A
T
G
G
T
T
C
A
A
G
A
G
A
T
T
G
T
A
G
A
A
A
G
G
G
G
G
T
T
A
T
T
7950
C
A
C
A
T
A
G
G
T
T
A
A
G
G
G
A
A
T
C
A
A
T
C
A
A
T
T
T
G
A
A
G
C
A
C
A
G
A
C
A
C
T
A
T
T
A
A
C
A
G
8000
C
A
G
G
A
A
G
A
G
T
C
C
T
G
A
A
G
A
A
G
T
G
A
A
A
A
T
G
G
T
G
T
T
T
C
T
G
G
A
A
C
C
C
A
G
A
G
A
G
T
8050
G
C
T
T
G
C
A
C
T
C
T
G
G
A
T
A
A
G
G
G
G
C
C
A
C
C
C
C
A
C
A
G
A
A
G
C
T
G
T
G
G
A
G
G
G
G
C
A
G
G
8100
G
C
T
G
C
A
G
G
T
G
A
G
G
A
T
G
A
A
C
A
C
A
C
A
G
C
T
A
T
T
G
A
C
A
G
A
A
A
A
T
A
T
G
C
C
C
A
G
G
G
8150
C
A
G
G
G
A
T
A
G
A
G
T
A
G
G
A
A
A
A
A
T
A
T
C
C
C
A
G
C
T
T
C
T
T
T
C
C
C
C
C
A
C
C
C
T
T
C
C
A
T
8200 |
var(8189):[T:0.01]
C
T
C
A
T
C
T
C
T
G
A
A
A
G
G
C
A
C
T
T
C
C
C
A
C
T
G
G
C
C
A
G
C
C
C
C
G
A
C
T
G
G
T
G
C
T
G
G
A
G
8250
G
G
C
A
A
G
A
G
A
G
C
C
T
A
T
G
A
G
C
C
A
T
G
T
G
T
G
G
C
T
G
T
C
A
G
C
C
C
C
T
T
G
G
T
G
G
A
G
A
G
8300
C
C
A
C
A
G
A
C
A
G
G
A
T
G
G
A
G
A
G
T
G
G
C
T
G
G
C
A
G
G
G
C
CCCGTGGG GATGAACAG
C
8350 |
var(8350):[T:0.01]
TTGGATTGGG GCGACTGGGC TTCATCCAGG CTGGGCTGGA TGTGTGCATA
8400
CA
T
TTCAGTG ACCCGTTTTA GAAACAGAAT TAATATGGTG AATAGAGAAA
8450 |
var(8403):[C:0.47]
GAAGAAATCA GTGACTTTCG CTCCTCCATA CAATT
C
AATT TGGCTTAAGT
8500 |
var(8486):[T:0.45]
TAGCC
A
AAGC CATACCAAGT CCTCTCTCTA TGTCTCAGCT GCTGCCAGGC
8550 |
var(8506):[G:0.01]
TTGTGGTGGC CACACAGCTG GCTAGACTGT CATCTCTGTC CTCAAGGGGC
8600
TCAAGCTAGA GGAGGAGAGT TGAGAAACCA AATCACTA
C
A CACAAAGTAG
8650 |
var(8639):[T:0.33]
AAGGTGGAAC ACACCCAGGA GCATGTCAAC GGGGTGCTGT GGGACTTCAG
8700
A
G
TAGGCAGA TCGTCACCAA GCTTCAACGG CAAAGATGCC ACTGGGGGAA
8750 |
var(8702):[A:0.01]
AGAAGGACCA AGCTTGGAAG A
C
AGAGTAAG TCTGGAGGCA AGATCTTGTC
8800 |
var(8772):[G:0.47]
TCACCAGCAG GGGCCAGGTC CATGGTGAC
A
CCTTCCCCAG GCAGTCACCT
8850 |
var(8830):[C:0.48]
CTCTGAGCCC ACTTTATATC CTAGGCCTGG ATTCAAAGAC ACTTGAGCCC
8900
TGCTCCAGCC T
T
CCTTTGAG GTGCTATCTT GGTGCC
T
TTC CTATAATCAC
8950 |
var(8912):[A:0.02]
|
var(8937):[C:0.48]
TGCTCCAGTC CCATGTCATC TGGTCCCCAG TTACCACATC AAGCTTCCCG
9000
AAGCTCCACA CAGACCATGC CACATCTTTA CCAAAAAATC AGCAGTGGGT
9050
CCCCTCACCT CCAGGACAAA GCTCCAGCTC TTCGACCTGC CTGTCAATAT
9100
TTGCAATCAC TGCCTGCACA AATTAGCTGG GTGTTGTCAT GAA
A
G
G
A
T
C
A
9150 |
REPEAT
|
NOT SCANNED
C
T
T
G
A
G
C
C
C
A
G
G
A
G
T
T
C
C
A
G
G
C
T
G
C
A
A
T
G
A
C
C
T
A
T
G
A
T
T
G
A
A
C
C
A
C
T
G
C
A
9200
C
T
C
T
G
G
C
C
T
G
G
G
T
G
A
C
A
G
A
G
T
G
G
A
T
C
T
A
A
A
C
T
A
A
A
A
A
T
A
A
A
A
A
G
A
T
T
T
A
C
9250
A
G
T
C
A
A
G
C
C
T
C
A
A
A
G
G
C
T
T
T
T
C
C
C
A
T
A
C
C
T
T
C
T
T
C
C
A
C
C
A
T
C
A
C
C
T
C
C
C
T
9300
G
A
G
C
C
C
T
C
T
C
T
T
T
C
C
T
C
C
G
A
A
G
C
C
T
C
C
T
C
G
C
A
C
A
T
C
C
C
T
A
C
C
A
C
C
T
T
T
G
C
9350
A
C
A
C
C
T
C
A
G
A
A
T
G
G
G
G
A
C
A
C
C
T
C
T
C
C
C
C
T
T
T
C
C
T
C
T
C
C
A
T
C
T
A
A
C
T
T
A
T
G
9400 |
REPEAT
G
T
T
T
T
C
A
A
A
C
T
T
G
A
G
C
G
T
G
A
T
C
A
G
T
T
A
C
C
T
G
G
A
G
A
T
T
T
G
T
G
A
A
A
A
C
C
C
A
G
9450
A
T
G
A
C
T
A
G
A
C
C
C
A
C
C
C
C
C
A
G
T
T
T
C
T
G
A
T
T
C
A
G
C
A
G
G
T
C
T
G
G
G
G
T
G
G
G
G
C
C
9500
G
A
G
G
A
T
C
T
G
C
A
T
T
T
C
T
A
A
C
A
A
G
T
T
C
C
C
A
G
G
T
C
A
T
G
T
T
G
C
C
G
C
T
G
C
T
A
C
T
G
9550
A
T
C
C
A
G
G
A
C
T
T
T
G
G
G
A
A
T
C
G
C
T
C
C
T
C
T
A
A
T
C
T
A
C
A
G
C
T
G
T
C
C
A
T
T
C
C
C
C
A
9600
T
G
G
T
C
C
A
T
T
C
A
G
A
G
C
C
T
C
T
C
T
G
C
C
C
T
G
C
C
C
C
C
A
C
C
A
C
C
C
C
C
A
G
T
C
T
C
G
C
C
9650
T
G
T
C
T
G
C
C
A
A
G
C
GCACAGGA AACTCTCCTT CATCCAAACC CTGGACCAA
C
9700 |
var(9700):[A:0.01]
GCCTTCTGCT TGGCCCACTC AGAGGCCTTG TAGGGTTGGT CTGATATTGG
9750
ACAGAGAAAT GGCCCTCTGC TCTTTCTCCC CTGACCTCTC
T
G
A
A
G
G
G
G
G
C
9800 |
REPEAT
C
T
G
C
C
C
C
T
C
C
A
C
A
C
C
T
G
T
G
G
G
T
A
T
T
T
C
T
C
G
C
A
A
G
G
T
G
G
A
G
A
C
A
A
G
A
G
A
C
T
9850
G
A
G
A
A
A
A
G
A
A
A
T
A
A
G
A
C
A
C
A
G
A
G
A
A
A
G
T
A
T
A
G
A
G
G
A
A
T
A
A
A
A
G
T
G
G
G
C
C
C
9900 |
var(9890):[G:0.01]
A
G
G
G
G
A
C
C
G
G
C
G
C
T
C
A
G
C
A
A
G
T
G
A
G
G
A
C
C
T
G
C
A
C
C
G
G
T
G
C
T
G
G
T
C
T
C
T
G
A
9950
G
T
T
C
C
C
T
C
A
G
T
A
T
T
T
A
T
T
G
A
T
C
A
C
T
A
T
C
T
T
T
A
C
T
A
T
C
T
C
C
G
C
G
A
G
G
G
G
A
A
10000
T
G
T
G
G
T
G
G
G
G
C
T
A
T
A
G
G
G
T
G
A
A
G
G
T
G
A
G
G
A
G
A
G
G
G
T
C
A
G
C
A
G
A
A
A
A
A
C
A
T
10050 |
var(10050):[C:0.49]
A
T
G
A
G
C
A
A
A
G
A
C
T
C
T
G
T
G
T
C
A
T
A
A
A
T
A
A
G
T
T
T
A
A
G
G
A
A
A
G
G
T
G
C
T
G
T
G
C
C
10100 |
var(10051):[G:0.48]
|
var(10056):[T:0.18]
T
G
G
A
T
G
T
G
C
T
A
G
A
T
T
T
A
T
G
T
T
T
A
A
C
T
T
T
A
C
A
C
A
A
A
C
A
T
C
T
C
A
G
T
G
T
A
G
T
A
10150
A
A
G
A
G
T
A
A
C
A
G
A
G
C
A
G
T
A
T
T
G
C
C
G
C
C
A
T
G
A
T
G
T
C
T
C
G
C
C
T
C
C
A
G
A
C
A
T
A
A
10200 |
var(10157):[G:0.02]
G
G
C
A
G
T
T
T
T
C
T
C
C
T
C
T
C
T
C
A
A
A
A
T
A
G
A
A
T
G
T
A
T
G
A
T
C
G
G
T
T
T
T
A
C
A
C
C
G
G
10250 |
var(10248):[T:0.19]
G
T
C
A
T
T
C
C
A
T
T
C
C
C
A
G
G
G
A
C
G
A
G
C
A
G
G
A
G
A
C
A
G
A
T
G
C
C
T
T
C
C
T
C
T
T
A
T
C
T
10300
C
A
A
C
C
G
A
A
T
A
G
A
G
G
C
C
T
T
C
C
T
C
C
T
T
C
A
C
T
A
A
T
C
C
T
C
C
T
C
A
G
C
A
C
A
G
A
C
C
C
10350 |
var(10331):[C:0.01]
T
T
T
A
C
G
G
G
T
G
T
C
G
G
G
C
T
G
G
G
G
G
G
C
T
G
T
A
A
G
G
T
C
T
T
T
C
C
C
T
T
C
C
C
A
T
G
A
G
G
10400
C
C
A
T
A
T
C
T
C
A
G
G
C
T
G
T
C
T
C
A
G
T
G
G
G
G
G
G
A
A
A
C
C
T
G
G
A
C
A
A
T
A
C
C
T
A
G
G
C
T
10450
T
T
C
T
C
G
G
G
C
A
G
G
G
G
T
T
C
C
T
G
C
G
G
C
C
T
T
C
C
A
C
A
G
T
G
C
A
T
T
G
T
G
T
C
T
C
T
G
G
T
10500 |
var(10486):[T:0.26]
T
A
A
T
A
G
A
G
A
A
C
G
G
A
G
A
A
T
G
G
T
G
A
T
G
A
C
T
T
T
C
A
C
C
A
A
G
C
A
C
A
C
T
G
C
C
T
G
C
A
10550 |
var(10511):[T:0.24]
A
G
A
A
C
T
T
T
TC
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
A
C
A
G
A
G
T
C
T
T
G
C
T
C
T
G
T
C
G
C
C
C
10600 |
REPEAT
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
C
G
C
G
A
T
C
T
C
G
G
C
T
C
A
C
T
G
C
C
A
C
C
T
C
T
G
C
C
T
C
C
C
10650
G
G
G
T
T
C
A
C
G
C
C
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
C
G
A
G
T
A
G
C
T
G
G
G
A
C
T
A
C
A
G
10700
G
C
G
C
C
C
G
C
C
A
C
C
A
C
G
C
C
C
G
G
C
TAAT
T
T
T
T
T
T
G
T
A
T
T
T
T
T
T
T
A
G
T
A
G
A
G
A
T
10750 |
REPEAT
|
var(10750):[C:0.03]
G
G
G
G
T
T
T
C
A
C
C
G
T
G
T
T
C
A
C
C
A
G
G
A
T
G
G
T
C
T
C
G
A
T
C
T
C
C
T
G
A
C
C
T
C
A
T
G
A
T
10800
C
C
G
C
C
C
G
C
C
T
T
G
G
C
C
T
C
C
C
A
A
A
A
T
G
C
T
G
G
G
A
T
T
A
C
A
C
G
T
G
T
G
A
G
G
C
A
AGA
10850
A
C
T
T
T
T
T
A
A
A
A
G
T
G
C
A
T
C
T
T
G
C
G
C
A
G
C
C
C
T
A
G
A
T
C
C
A
T
T
A
A
A
C
C
T
T
G
A
T
T
10900 |
REPEAT
C
A
A
T
A
C
A
G
G
A
C
A
T
G
T
T
T
T
T
G
T
G
A
G
C
A
C
A
G
G
G
T
T
G
G
G
A
C
A
A
A
A
G
T
T
A
C
A
G
A
10950
T
T
A
A
C
A
G
C
A
T
C
T
C
A
A
A
G
C
A
G
A
A
C
A
A
T
T
T
T
T
C
T
T
A
G
T
A
C
A
G
A
T
C
A
A
A
A
T
G
G
11000 |
var(10952):[A:0.01]
|
var(10990):[C:0.03]
A
G
T
T
T
C
T
T
A
T
G
T
C
T
T
C
C
T
T
T
T
T
C
T
A
C
A
T
A
G
A
C
A
C
A
G
T
A
A
C
A
A
T
C
T
G
A
T
C
T
11050
C
T
C
T
T
T
C
T
T
T
T
C
C
C
C
A
T
A
CC TCTCACGCTG TATCAGGCCC CAATTCTTGG
11100
GAACGTCACC TTAGAACTGT CCCACACATT TCTACAGCCA CTTGGCTCAG
11150
GCCCTTTGCT GACCAGGATG GTTGCAGTTC TGCCTTTGGT GCCTCGCCTC
11200
CTCCAGTTCT TTCACTCAGC AGCTGCAGGG GTCCACGTGG CAAATCTAAT
11250
AATCTTCTTC TCTATAGAAA ATCCTCTGCT GGCTCTCTAG TGCCCAGGAT
11300
CCAGTCCCAG CATCTCAGCA CGGCCTTCAA GCATTTCCAC
G
TCCTGGCCT
11350 |
var(11341):[A:0.01]
GGCTCCATGG TCTCCCC
G
CC AATTTGCCAC CTTCTCCATG CATCCTTTTC
11400 |
var(11368):[A:0.01]
TGATCCCCTC CTCACTCATC CCAGCAAAGA ACCCCC
T
CCT GGCCTG
A
GCA
11450 |
var(11437):[G:0.01]
|
var(11447):[G:0.01]
TAGCATTTCG TGGTGTGTAT CTCAGAGCAT CCAGTTAGGG GTGTGCAAGT
11500
TTACTT
T
G
T
T
A
C
T
G
G
C
T
G
A
T
G
T
T
G
T
G
A
A
G
T
C
C
C
A
A
G
T
T
G
T
T
G
G
T
G
C
C
G
C
A
11550 |
REPEAT
A
A
C
A
A
A
A
A
A
T
T
G
G
A
C
A
T
G
A
C
A
C
A
C
A
C
A
A
A
T
A
G
C
A
A
A
G
C
A
G
C
A
A
A
A
G
T
T
T
A
11600
T
T
A
A
G
C
A
C
A
G
T
A
C
G
A
T
C
C
A
C
T
A
T
G
G
A
T
C
A
A
G
G
A
T
G
A
C
C
T
G
C
G
A
A
T
G
G
T
A
T
11650
C
A
G
C
A
T
C
A
C
T
T
T
G
C
T
A
T
A
T
T
T
C
A
T
G
G
C
C
T
T
T
T
C
T
A
T
G
T
G
T
T
T
T
T
T
T
T
C
T
C
11700
T
T
T
T
T
C
C
T
C
A
A
G
C
T
G
C
C
T
A
A
G
C
T
T
T
A
G
C
C
A
G
C
A
T
G
T
G
C
C
T
T
T
T
G
A
T
T
G
A
C
11750 |
var(11745):[G:0.26]
A
G
G
T
G
G
G
T
T
G
C
T
T
A
G
T
T
T
C
T
T
G
G
C
C
T
C
T
G
T
G
T
G
T
T
T
A
C
G
T
G
T
C
A
T
T
T
C
C
T
11800
T
C
C
C
A
T
A
G
T
T
T
T
A
A
G
T
A
C
A
T
G
C
A
T
G
A
T
A
T
G
C
A
C
T
C
T
G
T
A
G
G
C
A
T
G
A
A
C
C
T
11850
T
A
A
G
T
A
G
C
T
A
A
T
T
A
C
T
A
T
A
C
G
G
G
G
T
C
A
T
T
T
T
G
A
G
G
A
T
A
T
C
T
T
T
T
C
T
C
T
G
T
11900 |
var(11871):[A:0.01]
A
G
T
A
C
A
T
G
T
G
C
A
T
C
T
T
T
T
T
T
T
G
C
A
G
T
G
G
T
G
C
A
A
T
C
T
T
G
G
C
T
C
A
C
T
G
C
A
A
C
11950 |
REPEAT
C
T
C
C
T
C
C
T
C
C
C
T
G
G
T
T
C
A
A
G
T
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
T
T
C
C
T
A
A
G
C
A
C
C
12000
T
G
A
G
A
C
T
A
C
A
G
G
T
A
C
A
T
G
C
C
A
C
C
A
C
G
C
C
C
G
G
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
T
T
A
G
12050 |
var(12014):[G:0.40]
|
var(12029):[T:0.01]
T
A
G
A
G
A
T
G
G
G
G
T
T
T
C
A
C
C
A
T
G
T
T
G
G
C
C
A
G
G
C
T
G
A
T
C
T
C
G
A
A
C
T
C
C
T
G
A
C
C
12100
G
C
A
A
G
T
G
A
T
C
C
A
C
C
C
A
C
C
T
C
G
G
C
C
T
C
C
C
A
A
A
G
C
A
C
T
G
G
G
A
T
T
A
C
A
G
G
C
A
T
12150 |
var(12101):[A:0.02]
G
A
G
C
C
A
C
T
G
C
A
C
C
C
A
G
C
C
T
A
G
T
A
T
A
T
G
C
C
C
A
T
C
T
C
T
T
A
G
G
A
G
C
T
G
C
T
C
C
T
12200 |
var(12158):[C:0.32]
|
REPEAT
A
A
C
T
G
G
T
T
T
G
G
T
T
T
G
G
A
T
C
T
A
G
C
C
A
G
C
C
A
T
G
G
G
G
C
T
C
C
T
T
A
T
T
C
A
C
T
T
A
T
12250
T
T
A
T
C
T
T
C
T
G
T
T
T
T
T
G
C
T
C
A
C
C
T
G
C
C
T
C
T
T
T
C
T
C
T
T
G
C
T
T
C
T
G
C
T
C
C
T
A
C
12300
T
C
A
T
T
C
C
T
T
C
C
T
T
A
A
T
C
C
A
A
C
C
T
C
C
A
A
T
T
C
C
C
T
C
T
G
C
T
A
T
T
C
T
C
C
T
G
C
C
T
12350
C
A
AGTTCACT AGGCTGGCTG CAAGGGTCCT GAGGGAGAGG TTGTGTATCG
12400
CCCCTGTATA CTCCAGGTCC AGTAAATGTT TGCTGACTAA TGATTGGCAT
12450
TTCCCTCAG
G
C
C
C
T
G
C
C
A
T
T
T
C
T
G
T
G
G
G
C
T
C
A
G
G
T
C
C
C
T
A
C
T
G
G
C
T
C
A
G
G
12500 | Exon 2 |
UTR
C
C
C
C
T
G
C
C
T
C
C
C
T
C
G
G
C
A
A
G
G
C
C
A
C
A
A
T
G
A
A
C
C
G
G
G
G
A
G
T
C
C
C
T
T
T
T
A
G
G
12550
M N R G V P F R 8
C
A
C
T
T
G
C
T
T
C
T
G
G
T
G
C
T
G
C
A
A
C
T
G
G
GTAAG TTCTCAGACC TGGGGTCTCA
12600
H L L L V L Q L 16
AT
G
CAGATGA CGTGGGAGGA AAGGCAAAGG TGGAGGATGG GGTAGAGGGG
12650 |
var(12603):[:0.61]
GACAGC
G
GCG ACA
C
TGAGAC CTGACTCCTT TCTTTTCCAC TTAG
C
G
C
T
C
C
12700 |
var(12657):[A:0.01]
|
var(12664):[T:0.32]
| Exon 3
A L 18
T
C
C
C
A
G
C
A
G
C
C
A
C
T
C
A
G
G
G
A
A
A
G
A
A
A
G
T
G
G
T
G
C
T
G
G
G
C
A
A
A
A
A
A
G
G
G
G
A
T
12750
L P A A T Q G K K V V L G K K G D 35
A
C
A
G
T
G
G
A
A
C
T
G
A
C
C
T
G
T
A
C
A
G
C
T
T
C
C
C
A
G
A
A
G
A
A
G
A
G
C
A
T
A
C
A
A
T
T
C
C
A
12800
T V E L T C T A S Q K K S I Q F H 52
C
T
G
G
A
A
A
A
A
C
T
C
C
A
A
C
C
A
G
A
T
A
A
A
G
A
T
T
C
T
G
G
G
A
A
A
T
C
A
G
G
G
C
T
C
C
T
T
C
T
12850
W K N S N Q I K I L G N Q G S F 68
T
A
A
C
T
A
A
A
G
G TAGGGTTGCC TGGCTCCCCA TCCAGGGAGG AAAACACACT
12900
L T K 71
ATGGAGTGAA AGCCTTTGGT GTCTGAGATC TGGTCTTAGT TAAACTCTGG
12950
GATCCCAGAG GGCTTGGGTT GACAGAAACT CAGTGGCATT CTTATCCAGA
13000
GTTTCTCTAC ACCAACTGCT GGTGGCCCAG GGAAAGGTGG TATGTGAATT
13050
TCAATATTTT AATATTTAAT ATTCATGAAC TTATTTTAGT
G
A
G
T
T
T
T
A
G
A
13100 |
NOT SCANNED
A
C
A
A
T
C
A
C
T
A
T
C
A
C
T
T
A
A
A
A
C
C
C
G
T
G
A
T
T
T
C
T
T
G
A
G
T
A
T
T
G
T
T
G
C
T
A
C
A
G
13150
A
C
C
T
A
T
G
T
A
G
A
T
A
A
T
A
C
T
T
T
G
C
A
C
A
G
T
G
A
C
T
C
A
T
A
T
G
T
A
T
A
A
T
C
C
T
A
G
C
A
13200 |
REPEAT
C
T
G
T
G
G
G
A
G
G
C
T
G
A
G
G
C
C
G
G
A
G
G
A
T
T
G
C
T
T
G
A
G
T
C
C
A
G
G
A
G
T
T
C
A
A
G
A
C
C
13250
A
G
C
C
T
G
A
A
C
A
A
C
A
T
A
G
T
G
A
G
A
C
T
C
T
G
T
C
T
C
T
A
T
G
A
A
A
A
A
A
A
A
T
A
T
A
T
A
T
A
13300
T
A
T
T
T
T
T
T
T
T
G
G
A
G
A
C
A
A
G
G
T
C
T
A
G
T
T
C
T
A
T
C
A
C
C
C
A
G
G
C
T
C
C
A
G
T
G
C
A
G
13350 |
REPEAT
T
G
G
T
G
T
G
A
T
C
T
C
G
G
C
T
C
A
C
T
G
C
A
A
T
C
T
C
C
A
C
C
T
C
C
C
A
G
G
C
T
C
A
A
G
T
C
A
T
C
13400
A
T
C
C
C
A
C
C
T
C
A
G
C
C
T
C
C
C
A
A
G
T
A
G
C
T
G
G
G
A
C
T
A
C
A
G
G
C
A
T
G
C
A
C
C
A
C
C
A
T
13450
G
C
C
A
G
G
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
T
T
T
A
T
A
G
A
G
A
C
A
G
G
G
T
T
T
C
A
C
C
A
T
G
T
T
G
G
13500
C
C
A
G
G
C
T
G
G
T
C
T
C
G
A
A
C
T
C
A
T
G
A
G
C
T
C
A
A
G
T
G
A
T
C
C
A
C
T
C
A
C
C
T
T
G
G
C
C
T
13550
C
T
C
A
G
A
G
T
G
C
T
G
G
A
A
T
T
A
C
A
G
G
T
G
T
G
T
G
T
C
A
C
T
A
T
G
C
C
T
A
G
C
C
A
A
A
A
A
A
A
13600
A
T
T
T
T
T
T
T
A
A
T
T
A
A
A
A
A
A
A
A
A
A
A
G
G
C
C
G
G
C
T
G
T
A
G
T
G
G
C
T
C
A
C
A
C
C
T
G
T
A
13650 |
REPEAT
A
T
C
C
A
G
A
A
C
T
T
T
G
G
G
A
G
T
T
T
G
A
G
G
T
G
G
G
C
A
G
A
T
C
A
C
C
G
G
N
G
G
T
C
A
G
G
A
G
T
13700
T
C
A
A
G
A
C
C
A
G
T
C
T
G
G
C
C
A
A
C
A
T
G
G
T
G
A
A
A
C
C
C
G
G
T
C
T
C
T
A
C
T
A
A
A
A
A
T
A
C
13750
A
A
A
A
A
T
T
A
G
C
C
A
G
G
T
G
T
G
G
G
G
G
T
G
C
A
G
T
C
C
T
G
T
A
C
T
T
C
C
A
G
C
T
A
C
T
C
A
G
G
13800
A
G
G
C
T
G
A
G
G
C
A
G
G
A
G
A
C
T
C
G
C
T
T
G
A
A
C
C
T
G
G
G
A
G
G
C
A
A
A
G
G
C
T
G
C
A
G
T
G
A
13850
G
C
T
G
A
G
A
T
T
G
C
A
C
C
A
C
T
G
C
A
C
T
C
C
A
G
C
C
T
G
G
G
T
G
A
C
A
G
A
G
C
A
A
G
A
C
T
T
C
A
13900
T
C
T
C
A
A
A
A
A
A
A
A
A
A
A
A
A
A
A
G
C
T
G
C
A
N
A
T
T
T
A
T
T
A
T
T
A
T
T
A
T
T
A
T
T
A
G
T
T
T
13950 |
REPEAT
A
T
T
T
A
T
T
T
A
T
T
T
T
T
T
T
G
A
G
A
C
A
G
A
G
T
C
T
C
G
T
T
C
T
G
T
C
G
C
C
C
A
G
G
C
T
G
G
A
G
14000
T
G
C
G
G
T
G
G
C
G
T
G
A
T
C
T
T
G
G
C
T
C
A
T
T
G
C
A
A
C
C
T
C
C
A
C
C
T
C
C
C
G
G
G
T
T
C
A
A
G
14050
T
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
C
G
A
G
T
A
G
C
T
G
G
G
A
C
T
A
C
A
G
G
C
G
T
A
T
G
C
C
14100
A
C
C
A
T
G
C
C
T
G
G
C
T
A
A
T
T
T
T
T
T
G
T
A
C
T
T
T
T
A
G
T
A
G
A
G
A
C
A
G
A
G
T
T
T
C
A
C
G
G
14150
T
G
T
T
A
G
C
C
A
G
G
C
T
G
G
T
C
T
T
G
A
T
C
T
C
C
T
G
A
C
C
T
C
G
T
G
A
T
T
T
A
C
C
C
T
C
C
T
T
G
14200
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
T
G
A
G
T
C
A
C
T
G
T
G
C
C
C
G
G
C
C
C
A
G
14250
A
A
T
C
A
T
T
T
T
T
T
T
C
T
A
C
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
G
C
A
A
A
C
T
C
T
C
G
A
T
C
T
G
T
T
G
14300 |
REPEAT
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
G
C
A
T
G
A
T
C
T
T
G
G
C
T
C
A
C
T
G
C
A
A
G
C
T
C
T
G
C
C
14350
T
C
C
C
A
G
G
T
T
C
A
A
G
C
A
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
T
G
A
G
T
A
G
C
T
G
G
G
A
C
T
14400
A
C
A
G
G
C
G
T
G
T
G
C
C
A
C
C
A
T
G
C
C
C
G
G
C
T
A
A
T
T
T
G
C
G
T
A
T
T
T
T
T
A
G
T
A
G
A
G
A
C
14450
C
G
G
T
T
T
T
C
A
T
C
A
T
A
T
T
G
G
C
C
A
G
G
C
T
G
G
T
C
T
T
G
A
A
C
T
C
C
T
G
A
C
C
T
C
A
A
G
T
G
14500
A
T
T
C
T
C
C
C
A
C
C
T
T
A
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
A
T
G
A
G
C
T
A
C
14550
T
G
C
A
C
T
T
G
G
C
C
T
T
T
T
C
T
C
C
T
G
G
T
T
T
T
A
A
A
A
C
T
A
T
T
A
T
A
T
G
C
T
C
A
T
T
A
C
A
A
14600 |
REPEAT
A
A
T
A
T
T
T
G
G
T
C
A
A
T
G
A
A
G
A
A
A
A
G
A
A
T
A
T
G
G
A
A
G
A
A
A
A
T
C
A
A
A
T
G
C
A
T