Site Allele1 Total-pop Allele2 Total-pop hz 000092 T 0.01 G 0.99 0.01 000104 G 0.03 A 0.97 0.05 000183 - 0.01 + 0.99 0.03 000261 A 0.01 C 0.99 0.03 000376 A 0.24 G 0.76 0.37 000498 A 0.01 G 0.99 0.01 001000 T 0.03 C 0.97 0.06 001516 G 0.02 C 0.98 0.04 002316 T 0.01 C 0.99 0.02 002583 G 0.20 C 0.80 0.32 003225 T 0.01 G 0.99 0.01 003714 T 0.01 C 0.99 0.01 003777 C 0.24 T 0.76 0.37 003911 - 0.20 + 0.80 0.33 004008 C 0.01 A 0.99 0.01 004074 G 0.01 A 0.99 0.02 004854 C 0.01 T 0.99 0.01 005163 T 0.23 C 0.77 0.36 005264 A 0.09 T 0.91 0.16 005284 T 0.01 C 0.99 0.03 005482 T 0.02 C 0.98 0.04 005955 A 0.03 G 0.97 0.06 006554 C 0.02 G 0.98 0.04 006655 T 0.11 C 0.89 0.19 006656 T 0.36 G 0.64 0.46 006805 T 0.01 C 0.99 0.01 007007 - 0.01 + 0.99 0.01 007249 A 0.01 G 0.99 0.01 007432 A 0.25 G 0.75 0.37 007501 T 0.02 C 0.98 0.04 007739 A 0.01 G 0.99 0.02 007784 A 0.22 G 0.78 0.34 007880 C 0.01 T 0.99 0.02 007928 - 0.21 + 0.79 0.33 007972 A 0.01 T 0.99 0.01 007991 T 0.01 G 0.99 0.01 008045 T 0.01 A 0.99 0.01 008087 A 0.15 G 0.85 0.25 008421 - 0.01 + 0.99 0.01 008676 A 0.22 G 0.78 0.34 008740 T 0.01 C 0.99 0.01 Note: pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000183: TT 003911: CAGATGAG 007007: T 007928: AAT 008421: CT