Site CDNA-Pos Description Allele1 Total-freq Allele2 Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000530 00000 ------------ T 0.99 A 0.01 0000 --- --- --- --- 000662 00000 ------------ A 0.52 G 0.48 0000 --- --- --- --- 000990 00000 ------------ C 0.99 G 0.01 0000 --- --- --- --- 001020 00000 ------------ T 0.53 G 0.47 0000 --- --- --- --- 001213 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 001632 00000 ------------ + 0.54 - 0.46 0000 --- --- --- --- 002102 00178 NON-SYN T 0.51 C 0.49 0028 GTC GCC VAL(V) ALA(A) 002112 00188 SYNON C 0.88 T 0.12 0031 AGC AGT SER(S) SER(S) 002162 00000 ------------ + 0.42 - 0.58 0000 --- --- --- --- 002239 00000 ------------ C 0.53 T 0.47 0000 --- --- --- --- 002332 00000 ------------ + 0.79 - 0.21 0000 --- --- --- --- 002367 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 002370 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 002379 00000 ------------ T 0.67 C 0.33 0000 --- --- --- --- 002867 00000 ------------ C 0.68 A 0.32 0000 --- --- --- --- 002952 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 002974 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 002980 00000 ------------ C 0.83 A 0.17 0000 --- --- --- --- 003022 00000 ------------ A 0.68 T 0.32 0000 --- --- --- --- 003078 00000 ------------ A 0.52 G 0.48 0000 --- --- --- --- 003503 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 003541 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 003719 00000 ------------ C 0.97 G 0.03 0000 --- --- --- --- 003833 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 003980 00000 ------------ T 0.99 G 0.01 0000 --- --- --- --- 004026 00000 ------------ A 0.54 G 0.46 0000 --- --- --- --- 006033 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 006095 00000 ------------ + 0.47 - 0.53 0000 --- --- --- --- 006144 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 006244 00000 ------------ + 0.67 - 0.33 0000 --- --- --- --- 006298 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 006786 00000 ------------ + 0.01 - 0.99 0000 --- --- --- --- 006856 00000 ------------ T 0.53 C 0.47 0000 --- --- --- --- 006857 00000 ------------ G 0.53 C 0.47 0000 --- --- --- --- 007526 00000 ------------ C 0.70 G 0.30 0000 --- --- --- --- 007701 00000 ------------ + 0.54 - 0.46 0000 --- --- --- --- 007754 00000 ------------ + 0.01 - 0.99 0000 --- --- --- --- 007802 00000 ------------ A 0.53 G 0.47 0000 --- --- --- --- 008001 00391 NON-SYN C 0.99 T 0.01 0099 TCG TTG SER(S) LEU(L) 008010 00400 NON-SYN C 0.98 T 0.02 0102 ACC ATC THR(T) ILE(I) 008021 00411 NON-SYN C 0.99 G 0.01 0106 CTT GTT LEU(L) VAL(V) 008047 00437 NON-SYN G 0.99 C 0.01 0114 GAG GAC GLU(E) ASP(D) 008113 00503 SYNON C 0.53 T 0.47 0136 TTC TTT PHE(F) PHE(F) 008492 00000 ------------ A 0.52 C 0.48 0000 --- --- --- --- 008597* 008671 00000 ------------ T 0.57 C 0.43 0000 --- --- --- --- 008829 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 008873 00000 ------------ G 0.53 A 0.47 0000 --- --- --- --- 008906 00000 ------------ A 0.53 G 0.47 0000 --- --- --- --- 008938 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 008967 00000 ------------ G 0.52 A 0.48 0000 --- --- --- --- 009093 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 009401 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 009484 00000 ------------ C 0.81 T 0.19 0000 --- --- --- --- 009525 00000 ------------ + 0.99 - 0.01 0000 --- --- --- --- 009687 00000 ------------ C 0.53 T 0.47 0000 --- --- --- --- 010399 00000 ------------ G 0.67 A 0.33 0000 --- --- --- --- 012354 00000 ------------ G 0.53 A 0.47 0000 --- --- --- --- 013081 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 013174 00000 ------------ C 0.99 A 0.01 0000 --- --- --- --- 013179 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 013184 00000 ------------ G 0.53 A 0.47 0000 --- --- --- --- 013616 00000 ------------ C 0.84 T 0.16 0000 --- --- --- --- 013853 00000 ------------ A 0.50 G 0.50 0000 --- --- --- --- 014024 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 014229 00000 ------------ G 0.53 A 0.47 0000 --- --- --- --- 014299 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 014300 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 014469 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 014790 00000 ------------ T 0.52 C 0.48 0000 --- --- --- --- 016008 00000 ------------ A 0.51 G 0.49 0000 --- --- --- --- 018080 00000 ------------ T 0.80 C 0.20 0000 --- --- --- --- 018237 00000 ------------ T 0.53 C 0.47 0000 --- --- --- --- 018368 00000 ------------ T 0.91 C 0.09 0000 --- --- --- --- 018431 00000 ------------ T 0.53 C 0.47 0000 --- --- --- --- 018456 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 018568 00000 ------------ G 0.53 A 0.47 0000 --- --- --- --- 018623 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 018820 00000 ------------ A 0.53 G 0.47 0000 --- --- --- --- 019037 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 019222 00613 NON-SYN G 0.99 A 0.01 0173 CGT CAT ARG(R) HIS(H) 019383 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 019528 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 019538 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 019821 00000 ------------ A 0.58 G 0.42 0000 --- --- --- --- 019852 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 020185 00757 NON-SYN G 0.52 A 0.48 0221 CGG CAG ARG(R) GLN(Q) 020303 00000 ------------ G 0.99 C 0.01 0000 --- --- --- --- 020345 00000 ------------ A 0.53 C 0.47 0000 --- --- --- --- 020447 00000 ------------ G 0.67 A 0.33 0000 --- --- --- --- 020499 00000 ------------ C 0.81 T 0.19 0000 --- --- --- --- 020618 00000 ------------ A 0.99 C 0.01 0000 --- --- --- --- 020661 00000 ------------ T 0.50 C 0.50 0000 --- --- --- --- 020736 00000 ------------ T 0.52 C 0.48 0000 --- --- --- --- 020851 00000 ------------ C 0.98 T 0.02 0000 --- --- --- --- 020945 00000 ------------ A 0.51 G 0.49 0000 --- --- --- --- 021075 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 021268 00000 ------------ A 0.90 G 0.10 0000 --- --- --- --- 021363 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 021437 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 021456 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 021690 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 021726 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 021754 00000 ------------ C 0.99 A 0.01 0000 --- --- --- --- 021865 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 021887 00000 ------------ T 0.99 C 0.01 0000 --- --- --- --- 022142 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 022175 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 022458 00000 ------------ T 0.52 G 0.48 0000 --- --- --- --- 022669 00000 ------------ G 0.52 T 0.48 0000 --- --- --- --- 022768 00000 ------------ C 0.99 G 0.01 0000 --- --- --- --- 022812 00000 ------------ C 0.68 T 0.32 0000 --- --- --- --- 022836 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 022915 00000 ------------ C 0.84 T 0.16 0000 --- --- --- --- 022925 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 022959 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 023502 00000 ------------ G 0.55 A 0.45 0000 --- --- --- --- 023541 00000 ------------ C 0.68 T 0.32 0000 --- --- --- --- 023966 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 024024 00000 ------------ A 0.69 G 0.31 0000 --- --- --- --- 024025 00000 ------------ T 0.99 G 0.01 0000 --- --- --- --- 024134 00000 ------------ G 0.97 C 0.03 0000 --- --- --- --- 024844 00000 ------------ A 0.98 T 0.02 0000 --- --- --- --- 025017 00000 ------------ C 0.80 T 0.20 0000 --- --- --- --- 025102 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 025260 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 025267 00000 ------------ A 0.94 G 0.06 0000 --- --- --- --- 025353 00000 ------------ + 0.19 - 0.81 0000 --- --- --- --- 025593 00000 ------------ G 0.98 A 0.02 0000 --- --- --- --- 025660 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 025716 00000 ------------ A 0.99 G 0.01 0000 --- --- --- --- 026102 00000 ------------ T 0.83 A 0.17 0000 --- --- --- --- 026108 00000 ------------ + 0.17 - 0.83 0000 --- --- --- --- 026299 00000 ------------ A 0.97 C 0.03 0000 --- --- --- --- 026438 00000 ------------ C 0.80 T 0.20 0000 --- --- --- --- 027166 00000 ------------ C 0.80 T 0.20 0000 --- --- --- --- 027263 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 027319 00000 ------------ T 0.80 A 0.20 0000 --- --- --- --- 028006 00000 ------------ G 0.99 T 0.01 0000 --- --- --- --- 030326 00000 ------------ T 0.79 C 0.21 0000 --- --- --- --- 030612 00000 ------------ C 0.98 T 0.02 0000 --- --- --- --- 030613 00000 ------------ G 0.97 A 0.03 0000 --- --- --- --- 030657 00000 ------------ T 0.69 C 0.31 0000 --- --- --- --- 030687 00000 ------------ A 0.80 G 0.20 0000 --- --- --- --- 031057 00000 ------------ G 0.83 A 0.17 0000 --- --- --- --- 031145 00000 ------------ A 0.52 G 0.48 0000 --- --- --- --- 031330 00000 ------------ G 0.68 T 0.32 0000 --- --- --- --- 031873 00000 ------------ G 0.99 C 0.01 0000 --- --- --- --- 031899 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 031972 00000 ------------ T 0.81 C 0.19 0000 --- --- --- --- 032112 00000 ------------ C 0.56 T 0.44 0000 --- --- --- --- 032123 00000 ------------ C 0.54 T 0.46 0000 --- --- --- --- 032148 00000 ------------ C 0.97 T 0.03 0000 --- --- --- --- 032154 00000 ------------ T 0.56 A 0.44 0000 --- --- --- --- 032418 00000 ------------ T 0.97 C 0.03 0000 --- --- --- --- 032423 00000 ------------ + 0.20 - 0.80 0000 --- --- --- --- 032680 00000 ------------ C 0.97 A 0.03 0000 --- --- --- --- 032690 00000 ------------ G 0.68 A 0.32 0000 --- --- --- --- 032742 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 032762 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- 032904 00000 ------------ A 0.80 T 0.20 0000 --- --- --- --- 032963 00000 ------------ T 0.57 G 0.43 0000 --- --- --- --- 033613 01666 3' UTR + 0.99 - 0.01 0000 --- --- --- --- 033678 01731 3' UTR C 0.99 G 0.01 0000 --- --- --- --- 034521 00000 ------------ C 0.99 T 0.01 0000 --- --- --- --- 034582 00000 ------------ A 0.81 T 0.19 0000 --- --- --- --- 034752 00000 ------------ C 0.99 A 0.01 0000 --- --- --- --- 035397 00000 ------------ C 0.68 T 0.32 0000 --- --- --- --- 035412 00000 ------------ A 0.80 G 0.20 0000 --- --- --- --- 035413 00000 ------------ T 0.80 A 0.20 0000 --- --- --- --- 035476 00000 ------------ G 0.99 A 0.01 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001632: CGTGAGGTCAGTGCGGGGA 002162: CGCCCCC 002332: TCAG 006095: CT 006244: A 006786: T 007701: CTCA 007754: A 009525: T 025353: C 026108: A 032423: G 033613: AT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 Total-freq Allele2 Total-freq Allele3 Total-freq 008597 C 0.99 G 0.01 T 0.01