************************************************************* **** **** **** Output from PHASE v2.0 **** **** Code by M Stephens, with contributions from N Li **** **** **** ************************************************************* BEGIN COMMAND_LINE /usr/local/genome/lib/phase/PHASE2 -d1 baxxx.phase.inp baxxx.phase.out END COMMAND_LINE BEGIN OUTFILE_LIST baxxx.phase.out_freqs : haplotype frequency estimates baxxx.phase.out_pairs : most likely haplotype pairs for each individual baxxx.phase.out_recom : estimates of recombination parameters baxxx.phase.out_monitor : file for monitoring convergence END OUTFILE_LIST BEGIN INPUT_SUMMARY Number of Individuals: 90 Number of Loci: 15 Positions of loci: 727 1051 1359 1894 2002 2666 3513 3705 4001 4095 8174 8259 8283 8443 8857 END INPUT_SUMMARY List of haplotypes found in best reconstruction, with counts. (See file baxxx.phase.out_freqs for haplotype population frequency estimates) BEGIN LIST_SUMMARY 1 GCCGGTGAGCAG 3 CI 3.000000 2 GCTAGTGATCAG 3 CD 4.000000 3 GCTAGTGATCAG 3 CI 1.000000 4 GCTAGTGATCGT 3 CD 1.000000 5 GCTAGTGATTAG 1 CD 4.000000 6 GCTAGTGATTAG 3 CI 1.000000 7 GCTAGTGATTGG 3 CD 2.000000 8 GCTAGTGCTTGG 1 CD 1.000000 9 GCTAGTGCTTGT 3 CI 2.000000 10 GCTAATACTTAG 1 TD 1.000000 11 GTCAGTGAGCAG 1 TD 45.000000 12 GTCAGTGAGCGG 3 CD 2.000000 13 GTCAGAGAGCGG 3 CD 1.000000 14 GTCGGTGAGCAG 1 TD 49.000000 15 GTCGGTGAGCAG 3 CD 1.000000 16 GTCGGTGAGCAG 3 CI 3.000000 17 GTCGGAGAGCGG 2 CD 1.000000 18 GTCGGAGAGCGG 3 CD 33.000000 19 GTCGGAGAGCGG 3 CI 1.000000 20 ACTAATACTTAG 1 TD 1.000000 21 ACTAATACTTGT 3 CD 21.000000 22 ACTAATACTTGT 3 CI 2.000000 END LIST_SUMMARY Summary of best reconstruction (numbers refer to the list of haplotypes given above) BEGIN BESTPAIRS_SUMMARY P001: (11,11) P002: (14,14) P003: (2,14) P004: (7,16) P005: (11,18) P006: (11,20) P007: (11,18) P008: (18,21) P009: (14,21) P010: (11,14) P011: (3,14) P012: (14,18) P013: (21,21) P014: (11,14) P015: (14,18) P016: (14,21) P017: (9,14) P018: (14,16) P019: (11,21) P020: (11,18) P021: (2,5) P022: (14,18) P023: (14,18) P024: (11,11) P025: (11,18) P026: (11,18) P027: (11,21) P028: (18,21) P029: (1,14) P030: (11,14) P031: (11,14) P032: (11,21) P033: (14,21) P034: (11,14) P035: (11,14) P036: (14,18) P037: (11,11) P038: (2,5) P039: (11,14) P040: (11,14) P041: (1,18) P042: (2,14) P043: (14,14) P044: (14,14) P045: (11,21) P046: (18,21) P047: (11,11) P048: (18,18) P049: (11,11) P050: (11,18) P051: (11,18) P052: (14,14) P053: (14,14) P054: (14,14) P055: (11,11) P056: (8,21) P057: (7,21) P058: (11,21) P059: (12,15) P060: (18,21) P061: (5,16) P062: (18,18) P063: (14,18) P064: (5,9) P065: (12,19) P066: (11,21) P067: (11,11) P068: (11,11) P069: (18,21) P070: (11,14) P071: (11,14) P072: (1,11) P073: (11,14) P074: (17,18) P075: (11,14) P076: (14,14) P077: (18,18) P078: (14,18) P079: (18,21) P080: (10,22) P081: (14,18) P082: (11,18) P083: (18,21) P084: (14,21) P085: (6,14) P086: (14,18) P087: (14,22) P088: (11,13) P089: (4,14) P090: (14,18) END BESTPAIRS_SUMMARY Haplotype estimates for each individual, with uncertain phases enclosed in () and uncertain genotypes enclosed in []: BEGIN BESTPAIRS1 0 P001 G T C A G T G A G C A G 1 T D G T C A G T G A G C A G 1 T D 0 P002 G T C G G T G A G C A G [1] T D G T C G G T G A G C A G 1 T D 0 P003 G C T A G T G A T C A G 3 C D G T C G G T G A G C A G 1 T D 0 P004 G C T A G T G A T T G G 3 C D G T C G G T G A G C A G 3 C [I] 0 P005 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P006 G T C A G T G A G C A G 1 T D [A] C T A A T A C T T A G 1 T D 0 P007 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P008 G T C G G A G A G C G G 3 C D A C T A A T A C T T G T 3 C D 0 P009 G T C G G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P010 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P011 G C T A G T G A T C A G 3 C (I) G T C G G T G A G C A G 1 T (D) 0 P012 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P013 A C T A A T A C T T G T 3 C D A C T A A T A C T T G T 3 C D 0 P014 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P015 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P016 G T C G G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P017 G C T A G T G C T T G T 3 C I G T C G G T G A G C A G 1 T D 0 P018 G T C G G T G A G C A G 1 T D G T C G G T G A G C A G 3 C I 0 P019 G T C A G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P020 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P021 G C T A G T G A T C A G 3 C D G C T A G T G A T T A G 1 C D 0 P022 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P023 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P024 G T C A G T G A G C A G 1 T D G T C A G T G A G C A G 1 T D 0 P025 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P026 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P027 G T C A G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P028 G T C G G A G A G C G G 3 C D A C T A A T A C T T G T 3 C D 0 P029 G C C G G T G A G C A G 3 C I G T C G G T G A G C A G 1 T D 0 P030 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P031 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P032 G T C A G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P033 G T C G G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P034 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P035 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P036 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P037 G T C A G T G A G C A G 1 T D G T C A G T G A G C A G 1 T D 0 P038 G C T A G T G A T [C] [A] G [3] C D G C T A G T G A T [T] A G [1] C D 0 P039 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P040 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P041 G C C G G T G A G C A G 3 C I G T C G G A G A G C G G 3 C D 0 P042 G C T A G T G A T C A G 3 C D G T C G G T G A G C A G 1 T D 0 P043 G T C G G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P044 G T C G G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P045 G T C A G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P046 G T C G G A G A G C G G 3 C D A C T A A T A C T T G T 3 C D 0 P047 G T C A G T G A G C A G 1 T D G T C A G T G A G C A G 1 T D 0 P048 G T C G G A G A G C G G 3 C D G T C G G A G A G C G G 3 C D 0 P049 G T C A G T G A G C A G 1 T D G T C A G T G A G C A G 1 T D 0 P050 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P051 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P052 G T C G G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P053 G T C G G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P054 G T C G G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P055 G T C A G T G A G C A G 1 T D G T C A G T G A G C A G 1 T D 0 P056 G C T A G T G C T T G G (1) C D A C T A A T A C T T G T (3) C D 0 P057 G C T A G T G A T T G G 3 C D A C T A A T A C T T G T 3 C D 0 P058 G T C A G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P059 G T C (A) G T G A G C G G 3 C D G T C (G) G T G A G C A G 3 C D 0 P060 G T C G G A G A G C G G 3 C D A C T A A T A C T T G T 3 C D 0 P061 G C T A G T G A T T A G 1 C D G T C G G T G A G C A G 3 C I 0 P062 G T C G G A G A G C G G 3 C D G T C G G A G A G C G G 3 C D 0 P063 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P064 G C T A G T G A T T A G 1 C D G C T A G T G C T T G T 3 C I 0 P065 G T C A G T G A G C G G 3 C (D) G T C G G A G A G C G G 3 C (I) 0 P066 G T C A G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P067 G T C A G T G A G C A G [1] T D G T C A G T G A G C A G 1 T D 0 P068 G T C A G T G A G C A G 1 T D G T C A G T G A G C A G 1 T D 0 P069 G T C G G A G A G C G G 3 C D A C T A A T A C T T G T 3 C D 0 P070 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P071 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P072 G C C G G T G A G C A G 3 C I G T C A G T G A G C A G 1 T D 0 P073 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P074 G T C G G A G A G C G G 2 C D G T C G G A G A G C G G 3 C D 0 P075 G T C A G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P076 G T C G G T G A G C A G 1 T D G T C G G T G A G C A G 1 T D 0 P077 G T C G G A G A G C G G 3 C D G T C G G A G A G C G G 3 C D 0 P078 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P079 G T C G G A G A G C G G 3 C D A C T A A T A C T T G T 3 C D 0 P080 (G) C T A A T A C T T A G 1 T (D) (A) C T A A T A C T T G T 3 C (I) 0 P081 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P082 G T C A G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P083 G T C G G A G A G C G G 3 C D A C T A A T A C T T G T 3 C D 0 P084 G T C G G T G A G C A G 1 T D A C T A A T A C T T G T 3 C D 0 P085 G C T A G T G A T T A G (3) (C) (I) G T C G G T G A G C A G (1) (T) (D) 0 P086 G T C G G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D 0 P087 G T C G G T G A G C A G 1 T (D) A C T A A T A C T T G T 3 C (I) 0 P088 G T C A G T G A G C A G 1 T D G T C A G A G A G C G G 3 C D 0 P089 G C T A G T G A T C G T 3 C D G T C G G T G A G C A G 1 T D 0 P090 G T C [G] G T G A G C A G 1 T D G T C G G A G A G C G G 3 C D END BESTPAIRS1 Haplotype estimates for each individual, with uncertain phases enclosed in () and uncertain genotypes enclosed in [] with phase known positions indicated by = BEGIN BESTPAIRS2 0 P001 = ? = = = = = = = = = = = = = = ? = = = = = = = = = = = = = 0 P002 = ? = = = = = = = = ? ? ? ? ? = ? = = = = = = = = ? ? ? ? ? 0 P003 = C T A = = = = T = = = 3 C ? = T C G = = = = G = = = 1 T ? 0 P004 = C T A = = = = T T G = = ? ? = T C G = = = = G C A = = ? ? 0 P005 = = = A = T = = = = A = 1 T = = = = G = A = = = = G = 3 C = 0 P006 ? T C = G = G ? ? C = = = = = ? C T = A = A ? ? T = = = = = 0 P007 ? ? = A = T = = = = A = 1 T = ? ? = G = A = = = = G = 3 C = 0 P008 G ? C G G A G A G C = G = = = A ? T A A T A C T T = T = = = 0 P009 G T C G G = G A G C A G 1 T = A C T A A = A C T T G T 3 C = 0 P010 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P011 ? C ? A = ? = = T = = = 3 ? (I) ? T ? G = ? = = G = = = 1 ? (D) 0 P012 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P013 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P014 = = = A = = ? ? ? = = = = = = = = = G = = ? ? ? = = = = = = 0 P015 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P016 G T C G G = G A G C A G 1 T = A C T A A = A C T T G T 3 C = 0 P017 = C T A = = = C T T G T 3 C I = T C G = = = A G C A G 1 T D 0 P018 = = = = = = = = = = = = 1 T D = = = = = = = = = = = = 3 C I 0 P019 G T C = G = G A G C A G 1 T = A C T = A = A C T T G T 3 C = 0 P020 = = = A = T = = = = A = 1 T = = = = G = A = = = = G = 3 C = 0 P021 = = = ? = = = = = C = = 3 = ? = = = ? = = = = = T = = 1 = ? 0 P022 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P023 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P024 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P025 = = = A = T = = = = A = 1 T ? = = = G = A = = = = G = 3 C ? 0 P026 = = = A = T = = = = A = 1 T = = = = G = A = = = = G = 3 C = 0 P027 G T C = G = G A G C A G 1 T = A C T = A = A C T T G T 3 C = 0 P028 G T C G G A G A G C = G = = = A C T A A T A C T T = T = = = 0 P029 = C = = = = = = = = = = 3 C I = T = = = = = = = = = = 1 T D 0 P030 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P031 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P032 G T C = G = G A G C A G 1 T ? A C T = A = A C T T G T 3 C ? 0 P033 G T C G G = G A G C A ? 1 ? ? A C T A A = A C T T G ? 3 ? ? 0 P034 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P035 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P036 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P037 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P038 = = = = = = = = = ? ? ? ? = = = = = = = = = = = ? ? ? ? = = 0 P039 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P040 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P041 = C ? ? ? ? ? ? = = A = = = I = T ? ? ? ? ? ? = = G = = = D 0 P042 = C T A = = = = T = = = 3 C = = T C G = = = = G = = = 1 T = 0 P043 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P044 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P045 G T C = G = G A G C A G 1 T ? A C T = A = A C T T G T 3 C ? 0 P046 G T C G G A G A G C = G = = = A C T A A T A C T T = T = = = 0 P047 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P048 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P049 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P050 = = = A = T = = = = A = 1 T = = = = G = A = = = = G = 3 C = 0 P051 = = = A = T = = = = A = 1 T = = = = G = A = = = = G = 3 C = 0 P052 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P053 = = = = = = = = ? = = = = = = = = = = = = = = ? = = = = = = 0 P054 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P055 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P056 G = = = G = G = = = = G (1) = = A = = = A = A = = = = T (3) = = 0 P057 G = = = G = G A = = = G = = = A = = = A = A C = = = T = = = 0 P058 G T C = G = G A G C A G 1 T = A C T = A = A C T T G T 3 C = 0 P059 = = = (A) = = = = = = G = = = = = = = (G) = = = = = = A = = = = 0 P060 G T C G G A G A G ? = G = = = A C T A A T A C T ? = T = = = 0 P061 = C T A = = = = T T = = 1 = D = T C G = = = = G C = = 3 = I 0 P062 = = = = = = = = = = ? ? ? ? ? = = = = = = = = = = ? ? ? ? ? 0 P063 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P064 = = = = = = = A = = A G 1 = D = = = = = = = C = = G T 3 = I 0 P065 = = = A = T = = = = = = = = (D) = = = G = A = = = = = = = = (I) 0 P066 G T C = G = G A G C A G 1 T = A C T = A = A C T T G T 3 C = 0 P067 = = = = = = = = = = ? ? ? ? ? = = = = = = = = = = ? ? ? ? ? 0 P068 = = ? = = = = = = = = = = = = = = ? = = = = = = = = = = = = 0 P069 G T C G G A G A G C = G = = = A C T A A T A C T T = T = = = 0 P070 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P071 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P072 = C = G = = = = = = = = 3 C ? = T = A = = = = = = = = 1 T ? 0 P073 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P074 = = = = = = = = = = = = 2 = = = = = = = = = = = = = = 3 = = 0 P075 = = = A = = = = = = = = = = = = = = G = = = = = = = = = = = 0 P076 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P077 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0 P078 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P079 G T ? G G ? G A G C = G = = = A C ? A A ? A C T T = T = = = 0 P080 (G) = = = = = = = = = A G 1 T (D) (A) = = = = = = = = = G T 3 C (I) 0 P081 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P082 = = ? A = T = = = = A = 1 T = = = ? G = A = = = = G = 3 C = 0 P083 G T C G G A G A G C = G = = = A C T A A T A C T T = T = = = 0 P084 G T ? G G = G A G C A G 1 T = A C ? A A = A C T T G T 3 C = 0 P085 = C T A = = = = T T = = (3) (C) (I) = T C G = = = = G C = = (1) (T) (D) 0 P086 = = = = = T = = = = A = 1 T = = = = = = A = = = = G = 3 C = 0 P087 G T C G G = G A G C A G 1 T (D) A C T A A = A C T T G T 3 C (I) 0 P088 = = = = = T = = = ? A = 1 T = = = = = = A = = = ? G = 3 C = 0 P089 = C T A = = = = T = G T 3 C = = T C G = = = = G = A G 1 T = 0 P090 = = = ? ? T = = = = A = 1 T = = = = ? ? A = = = = G = 3 C = END BESTPAIRS2 Phase probabilities at each site with phase known positions indicated by = and missing data positions indicated by ? BEGIN PHASEPROBS = ? = = = = = = = = = = = = = = ? = = = = = = = = ? ? ? ? ? = 1.00 1.00 1.00 = = = = 1.00 = = = 1.00 1.00 ? = 1.00 1.00 1.00 = = = = 1.00 1.00 1.00 = = ? ? = = = 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 = ? 1.00 1.00 = 1.00 = 1.00 ? ? 1.00 = = = = = ? ? = 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 = 1.00 ? 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = 1.00 = = = 1.00 1.00 1.00 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = = = = 1.00 = = = = = = = = = = = ? 1.00 ? 0.95 = ? = = 1.00 = = = 1.00 ? 0.51 = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = = = = = = = = = = = = = = = = = = = 1.00 = = ? ? ? = = = = = = = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = = 1.00 1.00 1.00 = = = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = = = = = = = = = = = = 1.00 1.00 0.98 1.00 1.00 1.00 = 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = = = = 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 = = = = ? = = = = = 1.00 = = 1.00 = ? = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = = = = = = = = = = = = = = = = = = = 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 ? = = = 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 = 1.00 1.00 1.00 = 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = 1.00 = = = = 1.00 = = = = = = = = = = 1.00 1.00 1.00 = = = 1.00 = = = = = = = = = = = = = = 1.00 = = = = = = = = = = = 1.00 1.00 1.00 = 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 ? 1.00 1.00 1.00 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 ? 1.00 ? ? = = = 1.00 = = = = = = = = = = = = = = 1.00 = = = = = = = = = = = = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = ? ? ? ? = = = = = 1.00 = = = = = = = = = = = = = = 1.00 = = = = = = = = = = = = 1.00 ? ? ? ? ? ? = = 1.00 = = = 1.00 = 1.00 1.00 1.00 = = = = 1.00 = = = 1.00 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 1.00 1.00 = 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 ? 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 = = = = 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 = = = = = = = = = = = = = = = = = = = = = = = = ? = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 = = = 1.00 = 1.00 = = = = 0.97 0.89 = = 1.00 = = = 1.00 = 1.00 1.00 = = = 1.00 = = = 1.00 1.00 1.00 = 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = = = = 0.82 = = = = = = 1.00 = = = = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 ? = 1.00 = = = = 1.00 1.00 1.00 = = = = 1.00 1.00 = = 0.99 = 0.98 = = = = = = = = = = ? ? ? ? ? = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = = = = = = = = 1.00 = = 1.00 1.00 1.00 = 1.00 = = = 0.99 = 0.96 = = = = = = = = 0.53 1.00 1.00 1.00 = 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = = = = = = = = = = = ? ? ? ? ? = = ? = = = = = = = = = = = = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = 1.00 = = = = = = 1.00 = = = = = = = = = = = = = = 1.00 = = = = = = = = = = = = 1.00 = 1.00 = = = = = = = = 1.00 1.00 ? = = = 1.00 = = = = = = = = = = = = = = = = = = = = = = = 1.00 = = = = = 1.00 = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = 1.00 1.00 ? 1.00 1.00 ? 1.00 1.00 1.00 1.00 = 1.00 = = = 0.58 = = = = = = = = = 1.00 1.00 1.00 1.00 0.63 = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = = = ? 0.95 = 1.00 = = = = 1.00 = 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = 1.00 = = = 1.00 1.00 ? 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 = = 1.00 1.00 1.00 = = = = 1.00 1.00 = = 0.56 0.56 0.53 = = = = = 1.00 = = = = 1.00 = 1.00 1.00 = 1.00 1.00 1.00 1.00 1.00 = 1.00 1.00 1.00 1.00 0.99 0.99 0.99 0.99 0.53 = = = = = 0.98 = = = ? 1.00 = 1.00 1.00 = = 0.98 0.98 0.98 = = = = 0.98 = 1.00 1.00 1.00 1.00 = = = = ? ? 1.00 = = = = 1.00 = 1.00 1.00 = END PHASEPROBS