Site Allele1 Total-pop Allele2 Total-pop 000170 + 29 - 149 000354 G 4 A 160 000374 A 27 G 133 000384 A 1 C 159 000473 A 22 C 138 000517 - 39 + 141 000604 A 1 G 179 000701 T 3 C 121 000725 T 1 G 121 000755 A 2 G 140 000777 - 52 + 106 001428 C 83 G 91 001438 T 42 C 132 001542 T 1 G 167 001581 C 2 G 164 001619 A 6 G 160 001688 T 2 C 162 001709 A 7 G 161 001873 A 2 G 176 001938 A 58 G 120 002031 A 58 G 120 002043 G 85 A 93 002167* 002328 A 1 G 173 002370 A 39 G 131 002747 C 2 G 172 002768 T 1 C 173 003528 T 12 C 166 003726 T 1 C 177 003743 C 41 T 135 003810 A 1 G 179 004211 T 1 C 179 005175 T 1 C 175 005459 T 83 G 93 005464 - 1 + 175 005491 - 28 + 150 005650 A 1 C 175 005752 A 7 G 169 006555 T 1 C 175 006696 A 2 T 178 006770 T 1 C 179 007067 T 1 C 177 007361 T 56 C 118 007460 C 1 G 171 007530 G 2 A 170 007632 T 1 C 171 007700 C 10 T 170 008032 T 1 C 169 008176 A 57 T 119 008659 T 67 C 109 008718 A 1 G 171 009175 T 1 C 179 009541 T 2 G 178 009626 C 1 T 179 009860 C 1 G 179 Note: pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000170: T 000517: TTAC 000777: C 005464: CCTTTTTAGCCCATGCC 005491: CCT *Site 2167 was observed to have three alleles. The frequency for each allele is given below: Site Allele1 Total-pop Allele2 Total-pop Allele3 Total-pop 2167 T 1 A 2 C 175