Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 000046 GG 0 0 0 0 0 GT 3 0 0 0 3 TT 23 22 22 24 91 0.097 0.000 0.000 0.000 0.025 000099 AA 26 22 22 24 94 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 000476 CC 26 22 22 24 94 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 000725 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 21 21 22 22 86 0.012 0.000 0.000 0.000 0.003 000939 CC 11 15 15 22 63 CT 6 5 3 0 14 TT 4 0 3 0 7 2.679 0.408 6.961 0.000 13.440 001323 CC 23 21 21 23 88 CT 1 0 1 0 2 TT 0 0 0 0 0 0.011 0.000 0.012 0.000 0.011 001710 CC 10 4 7 1 22 CT 7 7 12 6 32 TT 7 8 1 13 29 3.984 0.996 2.031 0.078 4.142 002236 AA 0 0 3 0 3 AC 5 6 7 1 19 CC 22 16 12 23 73 0.281 0.548 1.223 0.011 1.481 002755 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 25 21 22 23 91 0.010 0.000 0.000 0.000 0.003 002812 CC 24 20 22 23 89 CT 2 0 0 0 2 TT 0 0 0 0 0 0.042 0.000 0.000 0.000 0.011 002844 CC 0 0 0 0 0 CG 1 0 0 0 1 GG 25 21 22 23 91 0.010 0.000 0.000 0.000 0.003 003300 CC 23 22 22 24 91 CG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 003318 AA 22 22 22 23 89 AG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 003553 AA 1 0 1 0 2 AG 8 6 6 0 20 GG 18 15 13 24 70 0.009 0.583 0.078 0.000 0.160 003561 AA 0 0 0 0 0 AG 5 0 1 0 6 GG 21 21 20 24 86 0.294 0.000 0.012 0.000 0.105 003590 CC 26 21 22 24 93 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 003640 AA 0 0 0 0 0 AG 4 0 1 0 5 GG 23 21 21 24 89 0.173 0.000 0.012 0.000 0.070 003714 CC 17 15 13 24 69 CT 8 6 6 0 20 TT 2 0 2 0 4 0.551 0.583 0.948 0.000 2.355 003730 CC 26 21 22 23 92 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 003773 AA 6 9 1 16 32 AG 6 7 14 6 33 GG 13 2 6 1 22 5.740 0.126 3.590 0.195 4.651 004451 CC 27 22 21 24 94 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 004462 CC 27 21 22 24 94 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 004523 AA 2 0 0 0 2 AG 6 0 3 1 10 GG 19 21 19 23 82 1.877 0.000 0.118 0.011 4.897 004926 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 18 16 19 16 69 0.014 0.000 0.000 0.000 0.004 005207 AA 23 19 18 22 82 AG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 005478 AA 0 0 0 0 0 AC 0 0 0 1 1 CC 24 20 20 23 87 0.000 0.000 0.000 0.011 0.003 005482 CC 0 0 0 0 0 CT 0 0 0 1 1 TT 24 20 20 23 87 0.000 0.000 0.000 0.011 0.003 005483 CC 0 0 0 0 0 CT 0 0 0 1 1 TT 24 20 20 23 87 0.000 0.000 0.000 0.011 0.003 006121 AA 0 0 0 0 0 AT 0 1 0 0 1 TT 27 21 22 23 93 0.000 0.012 0.000 0.000 0.003 006226 GG 0 0 0 0 0 GT 4 0 0 0 4 TT 23 21 22 23 89 0.173 0.000 0.000 0.000 0.045 006656 CC 0 0 0 0 0 CT 0 0 0 1 1 TT 27 22 21 23 93 0.000 0.000 0.000 0.011 0.003 006831 CC 22 22 20 24 88 CG 5 0 1 0 6 GG 0 0 0 0 0 0.281 0.000 0.012 0.000 0.102 006916 CC 26 22 21 24 93 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 007153 CC 0 0 0 0 0 CT 2 0 0 0 2 TT 25 22 21 24 92 0.040 0.000 0.000 0.000 0.011 007306 CC 0 0 0 0 0 CT 0 0 1 0 1 TT 27 22 21 24 94 0.000 0.000 0.012 0.000 0.003 007782 AA 24 14 16 24 78 AG 1 7 3 0 11 GG 0 0 0 0 0 0.010 0.840 0.140 0.000 0.386 007881 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 25 21 22 23 91 0.000 0.000 0.000 0.011 0.003 009020 AA 25 12 8 15 60 AC 1 7 13 6 27 CC 0 0 0 0 0 0.010 0.969 4.220 0.583 2.935 010961 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 27 21 22 17 87 0.000 0.012 0.000 0.000 0.003 011018 CC 26 21 21 17 85 CT 1 1 1 0 3 TT 0 0 0 0 0 0.010 0.012 0.012 0.000 0.026 011019 AA 0 0 0 0 0 AG 4 0 2 0 6 GG 23 22 20 17 82 0.173 0.000 0.050 0.000 0.110 011032 AA 0 0 0 0 0 AT 1 0 0 0 1 TT 26 22 22 17 87 0.010 0.000 0.000 0.000 0.003 011176 AA 26 22 22 17 87 AT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 011570 CC 25 22 22 21 90 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 011683 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 26 22 21 21 90 0.000 0.000 0.012 0.000 0.003 011707 CC 10 4 6 1 21 CG 9 8 15 7 39 GG 7 10 1 13 31 2.314 1.010 4.219 0.002 1.595 011728 AA 0 0 0 0 0 AG 0 1 0 1 2 GG 26 21 22 20 89 0.000 0.012 0.000 0.012 0.011 011757 AA 26 22 22 20 90 AC 0 0 0 1 1 CC 0 0 0 0 0 0.000 0.000 0.000 0.012 0.003 011985 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 26 21 22 21 90 0.000 0.012 0.000 0.000 0.003 012185 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 23 21 21 22 87 0.011 0.000 0.000 0.000 0.003 012909 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 25 22 22 14 83 0.010 0.000 0.000 0.000 0.003 012982 AA 18 22 21 14 75 AG 8 0 1 0 9 GG 0 0 0 0 0 0.860 0.000 0.012 0.000 0.269 013048 AA 0 0 0 0 0 AC 0 0 1 0 1 CC 26 22 21 14 83 0.000 0.000 0.012 0.000 0.003 013057 -- 22 22 20 14 78 +- 0 0 0 1 1 ++ 0 0 0 0 0 0.000 0.000 0.000 0.018 0.003 013903 CC 22 20 19 22 83 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 014227 GG 24 22 21 24 91 GT 2 0 0 0 2 TT 0 0 0 0 0 0.042 0.000 0.000 0.000 0.011 014242 AA 23 22 21 24 90 AG 2 0 0 0 2 GG 1 0 0 0 1 5.462 0.000 0.000 0.000 22.239 014358 AA 0 0 1 0 1 AG 0 1 1 0 2 GG 26 21 19 24 90 0.000 0.012 8.629 0.000 22.239 014552 AA 0 0 0 0 0 AG 1 0 1 0 2 GG 26 22 21 24 93 0.010 0.000 0.012 0.000 0.011 014935 CC 26 22 22 23 93 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 015117 AA 0 0 0 0 0 AG 2 0 1 0 3 GG 25 22 20 24 91 0.040 0.000 0.012 0.000 0.025 015432 GG 23 21 22 23 89 GT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 015487 CC 24 21 21 23 89 CT 1 0 1 0 2 TT 0 0 0 0 0 0.010 0.000 0.012 0.000 0.011 015645 AA 0 0 0 0 0 AG 8 0 1 0 9 GG 17 21 21 23 82 0.907 0.000 0.012 0.000 0.246 015669 CC 12 21 20 23 76 CT 12 0 2 0 14 TT 0 0 0 0 0 2.667 0.000 0.050 0.000 0.640 016046 AA 0 0 0 0 0 AG 1 0 1 0 2 GG 26 22 21 24 93 0.010 0.000 0.012 0.000 0.011 016163 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 26 22 22 24 94 0.010 0.000 0.000 0.000 0.003 016275 AA 23 22 22 24 91 AG 4 0 0 0 4 GG 0 0 0 0 0 0.173 0.000 0.000 0.000 0.044 016393 AA 17 22 21 24 84 AG 10 0 1 0 11 GG 0 0 0 0 0 1.395 0.000 0.012 0.000 0.359 016578 GG 0 0 0 0 0 GT 12 0 2 0 14 TT 13 21 19 24 77 2.493 0.000 0.053 0.000 0.632 016732 CC 0 0 0 0 0 CT 9 0 1 0 10 TT 18 21 20 24 83 1.080 0.000 0.012 0.000 0.300 017069 CC 26 22 22 24 94 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 017929 GG 0 0 0 0 0 GT 2 0 0 0 2 TT 23 21 22 24 90 0.043 0.000 0.000 0.000 0.011 018231 AA 0 0 0 0 0 AG 0 1 1 0 2 GG 24 20 21 24 89 0.000 0.012 0.012 0.000 0.011 018385 CC 17 21 21 24 83 CT 8 0 1 0 9 TT 0 0 0 0 0 0.907 0.000 0.012 0.000 0.243 018405 AA 22 21 22 24 89 AC 2 0 0 0 2 CC 0 0 0 0 0 0.045 0.000 0.000 0.000 0.011 018518 CC 25 21 22 24 92 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 018557 CC 0 0 0 0 0 CT 9 0 1 0 10 TT 18 21 21 24 84 1.080 0.000 0.012 0.000 0.297 018558 AA 0 0 0 0 0 AG 9 0 1 0 10 GG 18 22 21 24 85 1.080 0.000 0.012 0.000 0.293 019159 CC 1 0 2 0 3 CG 6 5 5 0 16 GG 16 15 11 20 62 0.195 0.408 1.210 0.000 2.033 019266 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 23 21 19 21 84 0.011 0.000 0.000 0.000 0.003 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 013057: TAAA