Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 000175 CC 23 21 21 19 84 CT 2 0 1 0 3 TT 1 0 0 0 1 5.462 0.000 0.012 0.000 12.872 000357 CC 15 21 13 11 60 CT 10 0 8 6 24 TT 1 0 1 2 4 0.181 0.000 0.027 0.655 0.611 000397 AA 22 21 22 20 85 AG 4 0 0 0 4 GG 0 0 0 0 0 0.181 0.000 0.000 0.000 0.047 000550 CC 19 21 18 14 72 CT 7 0 3 5 15 TT 0 0 1 0 1 0.629 0.000 2.296 0.436 0.048 000553 AA 21 21 17 15 74 AG 5 0 5 4 14 GG 0 0 0 0 0 0.294 0.000 0.362 0.263 0.657 000574 CC 19 21 18 14 72 CT 7 0 3 5 15 TT 0 0 1 0 1 0.629 0.000 2.296 0.436 0.048 000725 CC 0 0 0 0 0 CG 2 0 0 0 2 GG 24 21 22 19 86 0.042 0.000 0.000 0.000 0.012 001411 CC 0 0 0 0 0 CT 0 0 0 1 1 TT 21 21 21 20 83 0.000 0.000 0.000 0.012 0.003 001469 CC 7 0 2 1 10 CG 9 5 7 8 29 GG 10 17 13 15 55 2.314 0.362 0.505 0.003 3.742 001524 AA 25 22 22 24 93 AG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 001570 AA 26 22 22 23 93 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 002126 CC 0 0 0 0 0 CG 6 0 5 0 11 GG 19 22 17 24 82 0.465 0.000 0.362 0.000 0.367 002496 CC 0 0 0 0 0 CG 0 0 4 1 5 GG 27 22 18 23 90 0.000 0.000 0.220 0.011 0.069 003190 AA 25 22 22 24 93 AC 1 0 0 0 1 CC 1 0 0 0 1 11.304 0.000 0.000 0.000 41.548 003298 CC 0 0 0 0 0 CG 0 1 0 0 1 GG 27 21 22 24 94 0.000 0.012 0.000 0.000 0.003 003687 CC 0 0 0 0 0 CG 0 1 0 0 1 GG 27 21 22 24 94 0.000 0.012 0.000 0.000 0.003 003811 CC 26 22 17 24 89 CG 0 0 5 0 5 GG 0 0 0 0 0 0.000 0.000 0.362 0.000 0.070 003877 AA 0 0 0 0 0 AC 0 4 0 0 4 CC 24 17 22 24 87 0.000 0.233 0.000 0.000 0.046 004239 CC 23 21 22 24 90 CG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 004382 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 23 21 22 24 90 0.011 0.000 0.000 0.000 0.003 004461 CC 23 21 22 24 90 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 004560 CC 26 22 21 24 93 CT 1 0 1 0 2 TT 0 0 0 0 0 0.010 0.000 0.012 0.000 0.011 004706 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 26 20 22 23 91 0.000 0.012 0.000 0.000 0.003 004805 CC 26 21 21 23 91 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 004806 CC 25 21 22 23 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 004889 CC 19 21 18 17 75 CT 7 0 3 6 16 TT 0 0 1 0 1 0.629 0.000 2.296 0.517 0.020 005284 AA 15 22 13 17 67 AC 11 0 8 6 25 CC 1 0 1 1 3 0.354 0.000 0.027 0.240 0.125 005349 AA 0 0 0 0 0 AC 0 0 0 1 1 CC 26 21 20 23 90 0.000 0.000 0.000 0.011 0.003 005605 AA 15 22 12 17 66 AG 10 0 7 6 23 GG 1 0 1 1 3 0.181 0.000 0.000 0.240 0.315 005719 CC 0 0 0 0 0 CT 0 0 1 0 1 TT 26 21 21 24 92 0.000 0.000 0.012 0.000 0.003 005761 AA 0 0 0 0 0 AG 0 2 0 0 2 GG 26 20 21 24 91 0.000 0.050 0.000 0.000 0.011 005804 AA 0 0 0 0 0 AC 2 5 1 0 8 CC 24 17 20 24 85 0.042 0.362 0.012 0.000 0.188 005982 CC 0 0 0 0 0 CT 3 0 0 0 3 TT 23 21 22 24 90 0.097 0.000 0.000 0.000 0.025 006021 GG 27 21 22 24 94 GT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.012 0.000 0.000 0.003 006181 CC 19 22 18 17 76 CT 7 0 3 7 17 TT 0 0 1 0 1 0.629 0.000 2.296 0.700 0.002 006215 CC 24 21 20 20 85 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 006350 -- 21 17 17 16 71 +- 1 4 2 1 8 ++ 0 0 0 0 0 0.012 0.233 0.059 0.016 0.225 006579 AA 15 20 16 13 64 AG 7 0 3 5 15 GG 0 0 1 0 1 0.787 0.000 1.976 0.468 0.013 006938 GG 25 22 20 22 89 GT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 007180 CC 0 0 1 0 1 CT 7 0 3 7 17 TT 18 22 16 16 72 0.663 0.000 1.976 0.741 0.000 007345 CC 0 0 1 0 1 CT 7 0 3 7 17 TT 18 21 17 17 73 0.663 0.000 2.136 0.700 0.000 007510 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 24 21 21 24 90 0.010 0.000 0.000 0.000 0.003 007575 AA 25 17 20 23 85 AG 0 3 1 0 4 GG 0 1 0 0 1 0.000 2.136 0.012 0.000 8.668 007611 CC 0 0 0 0 0 CT 0 0 1 0 1 TT 25 21 20 23 89 0.000 0.000 0.012 0.000 0.003 007649 GG 26 21 22 24 93 GT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 007768 CC 20 22 15 17 74 CT 7 0 3 7 17 TT 0 0 1 0 1 0.599 0.000 1.815 0.700 0.000 007846 CC 21 22 14 23 80 CT 6 0 5 1 12 TT 0 0 0 0 0 0.422 0.000 0.436 0.011 0.448 007957 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 26 22 20 24 92 0.010 0.000 0.000 0.000 0.003 007990 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 27 22 20 23 92 0.000 0.000 0.000 0.011 0.003 008039 AA 0 0 1 0 1 AG 7 0 3 7 17 GG 20 22 17 17 76 0.599 0.000 2.136 0.700 0.002 008336 CC 24 22 21 24 91 CT 3 0 0 0 3 TT 0 0 0 0 0 0.093 0.000 0.000 0.000 0.025 008371 CC 1 0 1 1 3 CT 11 0 8 6 25 TT 15 21 12 17 65 0.354 0.000 0.053 0.240 0.097 008405 CC 26 21 21 24 92 CT 1 0 0 0 1 TT 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 008443 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 27 21 20 24 92 0.000 0.000 0.012 0.000 0.003 008772 -- 0 0 0 0 0 +- 0 0 0 1 1 ++ 27 22 21 23 93 0.000 0.000 0.000 0.011 0.003 008873 AA 0 0 0 0 0 AT 0 0 0 1 1 TT 26 22 21 21 90 0.000 0.000 0.000 0.012 0.003 008877 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 26 22 21 22 91 0.010 0.000 0.000 0.000 0.003 009253 AA 27 18 20 23 88 AG 0 4 0 0 4 GG 0 0 0 0 0 0.000 0.220 0.000 0.000 0.045 009319 CC 0 0 0 0 0 CT 0 0 0 1 1 TT 27 22 20 23 92 0.000 0.000 0.000 0.011 0.003 009372 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 26 22 20 24 92 0.010 0.000 0.000 0.000 0.003 009547 CC 26 22 21 24 93 CG 1 0 0 0 1 GG 0 0 0 0 0 0.010 0.000 0.000 0.000 0.003 009613 AA 0 0 0 0 0 AG 0 0 5 0 5 GG 27 22 16 24 89 0.000 0.000 0.383 0.000 0.070 009724 CC 27 22 21 23 93 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 010084 CC 21 22 20 24 87 CT 6 0 1 0 7 TT 0 0 0 0 0 0.422 0.000 0.012 0.000 0.141 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 006350: C 008772: gctttaaggagatgggggtagttta